Gene annotation
Transcriptome id Sobic.002G430900.2,Sobic.002G430900.3
Synonym Sb02g044040
Functional annotation PWWP domain containing protein, expressed
UniProt A0A1W0W887 , A0A1W0W839
Pfam PF00855
Panther DB PTHR22981 PTHR22981:SF68
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G40340 : Tudor/PWWP/MBT superfamily protein
RAP-DB (Rice) LOC_Os07g49380.1,LOC_Os07g49380.2 : PWWP domain containing protein, expressed
MaizeGDB (Corn) Zm00025a049271 , Zm00025a015525
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G430900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G125700 NHL repeat-containing protein, putative, expressed -
2 Sobic.002G219900 Spc97 / Spc98 family protein, putative, expressed K16570: TUBGCP3, gamma-tubulin complex component 3
3 Sobic.010G269300 hydrolase, acting on carbon-nitrogen, putative, expressed -
4 Sobic.010G149600 intracellular protein transport protein USO1-related, putative, expressed -
5 Sobic.009G192500 OsFBX169 - F-box domain containing protein, expressed -
6 Sobic.002G017900 tetratricopeptide repeat containing protein, putative, expressed K11291: nuclear autoantigenic sperm protein
7 Sobic.001G395200 cyclin-related protein, putative, expressed -
8 Sobic.009G006900 ZOS5-01 - C2H2 zinc finger protein, expressed -
9 Sobic.005G120700 ThiF family domain containing protein, putative, expressed K10684: UBLE1A, ubiquitin-like 1-activating enzyme E1 A
10 Sobic.004G207000 fasciated ear2, putative, expressed -
11 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
12 Sobic.003G360300 exostosin family domain containing protein, expressed -
13 Sobic.007G031300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
14 Sobic.002G231300 CAMK_CAMK_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
15 Sobic.003G274400 WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
16 Sobic.008G080500 expressed protein -
17 Sobic.004G111000 bromodomain containing protein, expressed -
18 Sobic.006G245700 COP9 signalosome complex subunit 5b, putative, expressed K09613: COPS5, COP9 signalosome complex subunit 5
19 Sobic.002G229900 heat shock protein DnaJ, putative, expressed -
20 Sobic.001G217100 double-stranded RNA binding motif containing protein, expressed -


Gene co-expression network
sample Sobic002G430900 Sobic002G430900 Sobic007G125700 Sobic007G125700 Sobic002G430900--Sobic007G125700 Sobic002G219900 Sobic002G219900 Sobic002G430900--Sobic002G219900 Sobic010G269300 Sobic010G269300 Sobic002G430900--Sobic010G269300 Sobic010G149600 Sobic010G149600 Sobic002G430900--Sobic010G149600 Sobic009G192500 Sobic009G192500 Sobic002G430900--Sobic009G192500 Sobic002G017900 Sobic002G017900 Sobic002G430900--Sobic002G017900 Sobic001G395200 Sobic001G395200 Sobic002G430900--Sobic001G395200 Sobic009G006900 Sobic009G006900 Sobic002G430900--Sobic009G006900 Sobic005G120700 Sobic005G120700 Sobic002G430900--Sobic005G120700 Sobic007G125700--Sobic002G430900 Sobic004G207000 Sobic004G207000 Sobic007G125700--Sobic004G207000 Sobic007G125700--Sobic010G149600 Sobic007G125700--Sobic010G269300 Sobic007G125700--Sobic002G219900 Sobic003G077500 Sobic003G077500 Sobic007G125700--Sobic003G077500 Sobic007G125700--Sobic001G395200 Sobic004G043750 Sobic004G043750 Sobic007G125700--Sobic004G043750 Sobic006G280100 Sobic006G280100 Sobic007G125700--Sobic006G280100 Sobic002G219900--Sobic002G430900 Sobic002G219900--Sobic010G149600 Sobic002G219900--Sobic007G125700 Sobic002G219900--Sobic001G395200 Sobic002G219900--Sobic006G280100 Sobic003G361400 Sobic003G361400 Sobic002G219900--Sobic003G361400 Sobic001G143600 Sobic001G143600 Sobic002G219900--Sobic001G143600 Sobic003G274400 Sobic003G274400 Sobic002G219900--Sobic003G274400 Sobic003G027800 Sobic003G027800 Sobic002G219900--Sobic003G027800 Sobic010G269300--Sobic007G125700 Sobic010G269300--Sobic002G430900 Sobic002G263700 Sobic002G263700 Sobic010G269300--Sobic002G263700 Sobic001G123600 Sobic001G123600 Sobic010G269300--Sobic001G123600 Sobic003G360300 Sobic003G360300 Sobic010G269300--Sobic003G360300 Sobic008G080500 Sobic008G080500 Sobic010G269300--Sobic008G080500 Sobic010G236200 Sobic010G236200 Sobic010G269300--Sobic010G236200 Sobic010G279900 Sobic010G279900 Sobic010G269300--Sobic010G279900 Sobic009G032200 Sobic009G032200 Sobic010G269300--Sobic009G032200 Sobic010G149600--Sobic002G219900 Sobic010G149600--Sobic007G125700 Sobic010G149600--Sobic002G430900 Sobic010G149600--Sobic001G395200 Sobic010G149600--Sobic009G006900 Sobic010G149600--Sobic010G236200 Sobic005G032600 Sobic005G032600 Sobic010G149600--Sobic005G032600 Sobic010G149600--Sobic004G207000 Sobic010G149600--Sobic004G043750 Sobic003G132700 Sobic003G132700 Sobic009G192500--Sobic003G132700 Sobic007G117100 Sobic007G117100 Sobic009G192500--Sobic007G117100 Sobic009G192500--Sobic002G430900 Sobic009G022100 Sobic009G022100 Sobic009G192500--Sobic009G022100 Sobic009G192500--Sobic007G125700 Sobic002G095700 Sobic002G095700 Sobic009G192500--Sobic002G095700 Sobic003G253400 Sobic003G253400 Sobic009G192500--Sobic003G253400 Sobic002G223300 Sobic002G223300 Sobic009G192500--Sobic002G223300 Sobic004G229100 Sobic004G229100 Sobic009G192500--Sobic004G229100 Sobic002G017900--Sobic002G430900 Sobic004G198900 Sobic004G198900 Sobic002G017900--Sobic004G198900 Sobic002G017900--Sobic005G120700 Sobic002G017900--Sobic007G125700 Sobic002G017900--Sobic003G274400 Sobic002G017900--Sobic009G006900 Sobic002G177500 Sobic002G177500 Sobic002G017900--Sobic002G177500 Sobic002G339800 Sobic002G339800 Sobic002G017900--Sobic002G339800 Sobic002G017900--Sobic004G207000 Sobic003G104100 Sobic003G104100 Sobic001G395200--Sobic003G104100 Sobic009G259900 Sobic009G259900 Sobic001G395200--Sobic009G259900 Sobic001G395200--Sobic002G219900 Sobic001G395200--Sobic010G149600 Sobic003G351900 Sobic003G351900 Sobic001G395200--Sobic003G351900 Sobic006G008300 Sobic006G008300 Sobic001G395200--Sobic006G008300 Sobic001G395200--Sobic007G125700 Sobic001G395200--Sobic004G043750 Sobic001G079900 Sobic001G079900 Sobic001G395200--Sobic001G079900 Sobic009G006900--Sobic004G207000 Sobic009G006900--Sobic010G149600 Sobic006G272800 Sobic006G272800 Sobic009G006900--Sobic006G272800 Sobic009G006900--Sobic002G430900 Sobic002G196500 Sobic002G196500 Sobic009G006900--Sobic002G196500 Sobic005G062600 Sobic005G062600 Sobic009G006900--Sobic005G062600 Sobic002G302600 Sobic002G302600 Sobic009G006900--Sobic002G302600 Sobic009G006900--Sobic002G017900 Sobic001G540700 Sobic001G540700 Sobic009G006900--Sobic001G540700 Sobic005G120700--Sobic010G269300 Sobic005G120700--Sobic002G430900 Sobic004G287100 Sobic004G287100 Sobic005G120700--Sobic004G287100 Sobic005G120700--Sobic002G017900 Sobic004G256300 Sobic004G256300 Sobic005G120700--Sobic004G256300 Sobic003G222700 Sobic003G222700 Sobic005G120700--Sobic003G222700 Sobic005G120700--Sobic003G360300 Sobic006G245700 Sobic006G245700 Sobic005G120700--Sobic006G245700 Sobic002G252100 Sobic002G252100 Sobic005G120700--Sobic002G252100
Octagon: transcription factors


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