Gene annotation
Transcriptome id Sobic.002G231300.2
Synonym PEPKR2, Sb02g027060
Functional annotation CAMK_CAMK_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt A0A1W0W5L3
Pfam PF14531
Panther DB PTHR24349 PTHR24349:SF102
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G12680 : phosphoenolpyruvate carboxylase-related kinase 2
RAP-DB (Rice) LOC_Os09g29170.3 : CAMK_CAMK_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a047323 , Zm00025a005476
Brachypodium KQJ90577 , KQJ98685
Barley HORVU5Hr1G069710.2 , HORVU5Hr1G069710.3 , HORVU5Hr1G069710.1
Wheat TraesCS5A02G246700 , TraesCS5B02G243700 , TraesCS5D02G252900
Populus -


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cDNA sequences
Sobic.002G231300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G430900 PWWP domain containing protein, expressed -
2 Sobic.007G125700 NHL repeat-containing protein, putative, expressed -
3 Sobic.010G051400 zinc finger protein, putative, expressed K04706: E3 SUMO-protein ligase PIAS1
4 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
5 Sobic.009G194300 BSD, putative, expressed -
6 Sobic.007G047600 expressed protein -
7 Sobic.002G119600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
8 Sobic.003G253400 expressed protein -
9 Sobic.005G114500 growth regulator related protein, putative, expressed -
10 Sobic.004G256300 RNA polymerase Rpb4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
11 Sobic.006G280100 SET domain containing protein, expressed -
12 Sobic.010G269300 hydrolase, acting on carbon-nitrogen, putative, expressed -
13 Sobic.003G005900 abscisic acid insensitive 8, putative, expressed -
14 Sobic.008G080500 expressed protein -
15 Sobic.001G492200 OsFBK11 - F-box domain and kelch repeat containing protein, expressed -
16 Sobic.001G395100 - K12835: DDX42, ATP-dependent RNA helicase DDX42
17 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
18 Sobic.001G526300 WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
19 Sobic.010G223400 expressed protein -
20 Sobic.010G103500 ATMAP70 protein, putative, expressed -


Gene co-expression network
sample Sobic002G231300 Sobic002G231300 Sobic002G430900 Sobic002G430900 Sobic002G231300--Sobic002G430900 Sobic007G125700 Sobic007G125700 Sobic002G231300--Sobic007G125700 Sobic010G051400 Sobic010G051400 Sobic002G231300--Sobic010G051400 Sobic003G240700 Sobic003G240700 Sobic002G231300--Sobic003G240700 Sobic009G194300 Sobic009G194300 Sobic002G231300--Sobic009G194300 Sobic007G047600 Sobic007G047600 Sobic002G231300--Sobic007G047600 Sobic002G119600 Sobic002G119600 Sobic002G231300--Sobic002G119600 Sobic003G253400 Sobic003G253400 Sobic002G231300--Sobic003G253400 Sobic005G114500 Sobic005G114500 Sobic002G231300--Sobic005G114500 Sobic002G430900--Sobic007G125700 Sobic002G219900 Sobic002G219900 Sobic002G430900--Sobic002G219900 Sobic010G269300 Sobic010G269300 Sobic002G430900--Sobic010G269300 Sobic010G149600 Sobic010G149600 Sobic002G430900--Sobic010G149600 Sobic009G192500 Sobic009G192500 Sobic002G430900--Sobic009G192500 Sobic002G017900 Sobic002G017900 Sobic002G430900--Sobic002G017900 Sobic001G395200 Sobic001G395200 Sobic002G430900--Sobic001G395200 Sobic009G006900 Sobic009G006900 Sobic002G430900--Sobic009G006900 Sobic005G120700 Sobic005G120700 Sobic002G430900--Sobic005G120700 Sobic007G125700--Sobic002G430900 Sobic004G207000 Sobic004G207000 Sobic007G125700--Sobic004G207000 Sobic007G125700--Sobic010G149600 Sobic007G125700--Sobic010G269300 Sobic007G125700--Sobic002G219900 Sobic003G077500 Sobic003G077500 Sobic007G125700--Sobic003G077500 Sobic007G125700--Sobic001G395200 Sobic004G043750 Sobic004G043750 Sobic007G125700--Sobic004G043750 Sobic006G280100 Sobic006G280100 Sobic007G125700--Sobic006G280100 Sobic010G051400--Sobic010G269300 Sobic007G159200 Sobic007G159200 Sobic010G051400--Sobic007G159200 Sobic008G080500 Sobic008G080500 Sobic010G051400--Sobic008G080500 Sobic001G051700 Sobic001G051700 Sobic010G051400--Sobic001G051700 Sobic009G129600 Sobic009G129600 Sobic010G051400--Sobic009G129600 Sobic009G003700 Sobic009G003700 Sobic010G051400--Sobic009G003700 Sobic007G183300 Sobic007G183300 Sobic010G051400--Sobic007G183300 Sobic002G145800 Sobic002G145800 Sobic010G051400--Sobic002G145800 Sobic010G077500 Sobic010G077500 Sobic010G051400--Sobic010G077500 Sobic001G369000 Sobic001G369000 Sobic003G240700--Sobic001G369000 Sobic001G335900 Sobic001G335900 Sobic003G240700--Sobic001G335900 Sobic001G170100 Sobic001G170100 Sobic003G240700--Sobic001G170100 Sobic006G138000 Sobic006G138000 Sobic003G240700--Sobic006G138000 Sobic003G314700 Sobic003G314700 Sobic003G240700--Sobic003G314700 Sobic003G293000 Sobic003G293000 Sobic003G240700--Sobic003G293000 Sobic009G049400 Sobic009G049400 Sobic003G240700--Sobic009G049400 Sobic001G426600 Sobic001G426600 Sobic003G240700--Sobic001G426600 Sobic003G227100 Sobic003G227100 Sobic003G240700--Sobic003G227100 Sobic009G056300 Sobic009G056300 Sobic009G194300--Sobic009G056300 Sobic009G194300--Sobic002G231300 Sobic009G194300--Sobic007G125700 Sobic003G005900 Sobic003G005900 Sobic009G194300--Sobic003G005900 Sobic005G040900 Sobic005G040900 Sobic009G194300--Sobic005G040900 Sobic009G194300--Sobic003G253400 Sobic003G304800 Sobic003G304800 Sobic009G194300--Sobic003G304800 Sobic004G145600 Sobic004G145600 Sobic009G194300--Sobic004G145600 Sobic007G036800 Sobic007G036800 Sobic009G194300--Sobic007G036800 Sobic002G412700 Sobic002G412700 Sobic007G047600--Sobic002G412700 Sobic007G145400 Sobic007G145400 Sobic007G047600--Sobic007G145400 Sobic008G092800 Sobic008G092800 Sobic007G047600--Sobic008G092800 Sobic004G356200 Sobic004G356200 Sobic007G047600--Sobic004G356200 Sobic003G360300 Sobic003G360300 Sobic007G047600--Sobic003G360300 Sobic007G047600--Sobic008G080500 Sobic007G047600--Sobic006G280100 Sobic007G047600--Sobic002G119600 Sobic001G467100 Sobic001G467100 Sobic007G047600--Sobic001G467100 Sobic001G156900 Sobic001G156900 Sobic002G119600--Sobic001G156900 Sobic010G139500 Sobic010G139500 Sobic002G119600--Sobic010G139500 Sobic002G119600--Sobic007G145400 Sobic004G204100 Sobic004G204100 Sobic002G119600--Sobic004G204100 Sobic010G000800 Sobic010G000800 Sobic002G119600--Sobic010G000800 Sobic002G119600--Sobic002G412700 Sobic005G110499 Sobic005G110499 Sobic002G119600--Sobic005G110499 Sobic001G248100 Sobic001G248100 Sobic002G119600--Sobic001G248100 Sobic003G334700 Sobic003G334700 Sobic002G119600--Sobic003G334700 Sobic010G279900 Sobic010G279900 Sobic003G253400--Sobic010G279900 Sobic003G062400 Sobic003G062400 Sobic003G253400--Sobic003G062400 Sobic001G395100 Sobic001G395100 Sobic003G253400--Sobic001G395100 Sobic003G253400--Sobic005G040900 Sobic005G025800 Sobic005G025800 Sobic003G253400--Sobic005G025800 Sobic003G253400--Sobic009G192500 Sobic004G347100 Sobic004G347100 Sobic003G253400--Sobic004G347100 Sobic003G253400--Sobic007G183300 Sobic008G058800 Sobic008G058800 Sobic003G253400--Sobic008G058800 Sobic003G130900 Sobic003G130900 Sobic005G114500--Sobic003G130900 Sobic003G230600 Sobic003G230600 Sobic005G114500--Sobic003G230600 Sobic001G474400 Sobic001G474400 Sobic005G114500--Sobic001G474400 Sobic010G223400 Sobic010G223400 Sobic005G114500--Sobic010G223400 Sobic001G308400 Sobic001G308400 Sobic005G114500--Sobic001G308400 Sobic005G114500--Sobic003G005900 Sobic005G059500 Sobic005G059500 Sobic005G114500--Sobic005G059500 Sobic005G114500--Sobic005G110499 Sobic009G122500 Sobic009G122500 Sobic005G114500--Sobic009G122500
Octagon: transcription factors


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