Gene annotation
Transcriptome id Sobic.001G467100.1
Synonym SURF1, Sb01g043830
Functional annotation SURF1, putative, expressed
UniProt C5WTU5
Pfam PF02104
Panther DB PTHR23427 PTHR23427:SF2
NCBI CDD KOG1563; Mitochondrial protein Surfeit 1/SURF1/SHY1, required for expression of cytochrome oxidase
KEGG Orthology K14998; SURF1, surfeit locus 1 family protein
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT3G17910 : Surfeit locus 1 cytochrome c oxidase biogenesis protein
RAP-DB (Rice) LOC_Os03g10360.1 : SURF1, putative, expressed
MaizeGDB (Corn) Zm00025a032288 , Zm00025a016569 , Zm00025a022303 , Zm00025a001169 , Zm00025a020270 , Zm00025a001741
Brachypodium PNT77967
Barley HORVU4Hr1G070400.11 , HORVU4Hr1G070400.10 , HORVU4Hr1G070400.9 , HORVU4Hr1G070400.8 , HORVU4Hr1G070400.5 , HORVU4Hr1G070400.4 , HORVU4Hr1G070400.7 , HORVU4Hr1G070400.6 , HORVU4Hr1G070400.1 , HORVU4Hr1G070400.3 , HORVU4Hr1G070400.2
Wheat TraesCS4B02G260400 , TraesCS4D02G260200 , TraesCS4A02G044900 , TraesCS4A02G044900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G208500 eukaryotic translation initiation factor 2A, putative, expressed K15026: translation initiation factor 2A
2 Sobic.010G172400 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
3 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
4 Sobic.001G099900 WD domain, G-beta repeat domain containing protein, expressed K14548: UTP4, U3 small nucleolar RNA-associated protein 4
5 Sobic.003G222700 similar to DEAD-box ATP-dependent RNA helicase 26(PubMedID : 29862293)@- K17679: ATP-dependent RNA helicase MSS116, mitochondrial
6 Sobic.007G145400 expressed protein -
7 Sobic.005G114500 growth regulator related protein, putative, expressed -
8 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
9 Sobic.005G110499 - K14006: protein transport protein SEC23
10 Sobic.002G423500 T-complex protein, putative, expressed K09498: T-complex protein 1 subunit zeta
11 Sobic.001G358500 GA20734-PA, putative, expressed -
12 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
13 Sobic.005G163700 T-complex protein, putative, expressed K09500: T-complex protein 1 subunit theta
14 Sobic.001G211900 methyltransferase, putative, expressed K11437: type I protein arginine methyltransferase
15 Sobic.007G177300 kinetochore protein, putative, expressed K11547: NDC80, HEC1, kinetochore protein NDC80
16 Sobic.002G131400 GPI mannosyltransferase 1, putative, expressed K05284: GPI mannosyltransferase 1 subunit M
17 Sobic.010G223400 expressed protein -
18 Sobic.006G056200 transport protein particle component, Bet3, domain containing protein, expressed -
19 Sobic.001G097900 expressed protein -
20 Sobic.009G003700 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C


Gene co-expression network
sample Sobic001G467100 Sobic001G467100 Sobic004G208500 Sobic004G208500 Sobic001G467100--Sobic004G208500 Sobic010G172400 Sobic010G172400 Sobic001G467100--Sobic010G172400 Sobic001G474400 Sobic001G474400 Sobic001G467100--Sobic001G474400 Sobic001G099900 Sobic001G099900 Sobic001G467100--Sobic001G099900 Sobic003G222700 Sobic003G222700 Sobic001G467100--Sobic003G222700 Sobic007G145400 Sobic007G145400 Sobic001G467100--Sobic007G145400 Sobic005G114500 Sobic005G114500 Sobic001G467100--Sobic005G114500 Sobic001G161700 Sobic001G161700 Sobic001G467100--Sobic001G161700 Sobic005G110499 Sobic005G110499 Sobic001G467100--Sobic005G110499 Sobic004G208500--Sobic001G467100 Sobic004G208500--Sobic001G099900 Sobic001G015400 Sobic001G015400 Sobic004G208500--Sobic001G015400 Sobic002G408900 Sobic002G408900 Sobic004G208500--Sobic002G408900 Sobic002G150700 Sobic002G150700 Sobic004G208500--Sobic002G150700 Sobic004G208500--Sobic001G161700 Sobic010G223300 Sobic010G223300 Sobic004G208500--Sobic010G223300 Sobic004G208500--Sobic005G110499 Sobic005G163700 Sobic005G163700 Sobic004G208500--Sobic005G163700 Sobic010G172400--Sobic001G467100 Sobic010G172400--Sobic003G222700 Sobic002G399900 Sobic002G399900 Sobic010G172400--Sobic002G399900 Sobic006G091000 Sobic006G091000 Sobic010G172400--Sobic006G091000 Sobic002G182000 Sobic002G182000 Sobic010G172400--Sobic002G182000 Sobic010G172400--Sobic005G114500 Sobic010G172400--Sobic001G474400 Sobic001G097900 Sobic001G097900 Sobic010G172400--Sobic001G097900 Sobic001G012900 Sobic001G012900 Sobic010G172400--Sobic001G012900 Sobic001G474400--Sobic005G110499 Sobic003G397900 Sobic003G397900 Sobic001G474400--Sobic003G397900 Sobic001G474400--Sobic007G145400 Sobic001G474400--Sobic001G097900 Sobic001G474400--Sobic005G114500 Sobic005G106200 Sobic005G106200 Sobic001G474400--Sobic005G106200 Sobic010G223400 Sobic010G223400 Sobic001G474400--Sobic010G223400 Sobic001G474400--Sobic001G467100 Sobic006G265600 Sobic006G265600 Sobic001G474400--Sobic006G265600 Sobic001G099900--Sobic004G208500 Sobic001G099900--Sobic001G015400 Sobic001G099900--Sobic001G467100 Sobic001G099900--Sobic002G150700 Sobic003G146600 Sobic003G146600 Sobic001G099900--Sobic003G146600 Sobic001G099900--Sobic001G474400 Sobic001G428800 Sobic001G428800 Sobic001G099900--Sobic001G428800 Sobic006G142400 Sobic006G142400 Sobic001G099900--Sobic006G142400 Sobic001G156900 Sobic001G156900 Sobic001G099900--Sobic001G156900 Sobic004G256300 Sobic004G256300 Sobic003G222700--Sobic004G256300 Sobic003G222700--Sobic001G467100 Sobic003G222700--Sobic010G172400 Sobic001G061200 Sobic001G061200 Sobic003G222700--Sobic001G061200 Sobic007G022700 Sobic007G022700 Sobic003G222700--Sobic007G022700 Sobic007G173700 Sobic007G173700 Sobic003G222700--Sobic007G173700 Sobic001G229300 Sobic001G229300 Sobic003G222700--Sobic001G229300 Sobic002G142700 Sobic002G142700 Sobic003G222700--Sobic002G142700 Sobic003G222700--Sobic002G399900 Sobic007G145400--Sobic001G474400 Sobic009G003700 Sobic009G003700 Sobic007G145400--Sobic009G003700 Sobic001G248100 Sobic001G248100 Sobic007G145400--Sobic001G248100 Sobic002G119600 Sobic002G119600 Sobic007G145400--Sobic002G119600 Sobic006G261400 Sobic006G261400 Sobic007G145400--Sobic006G261400 Sobic003G314700 Sobic003G314700 Sobic007G145400--Sobic003G314700 Sobic007G145400--Sobic001G467100 Sobic008G092800 Sobic008G092800 Sobic007G145400--Sobic008G092800 Sobic006G245900 Sobic006G245900 Sobic007G145400--Sobic006G245900 Sobic003G130900 Sobic003G130900 Sobic005G114500--Sobic003G130900 Sobic003G230600 Sobic003G230600 Sobic005G114500--Sobic003G230600 Sobic005G114500--Sobic001G474400 Sobic005G114500--Sobic010G223400 Sobic001G308400 Sobic001G308400 Sobic005G114500--Sobic001G308400 Sobic003G005900 Sobic003G005900 Sobic005G114500--Sobic003G005900 Sobic005G059500 Sobic005G059500 Sobic005G114500--Sobic005G059500 Sobic005G114500--Sobic005G110499 Sobic009G122500 Sobic009G122500 Sobic005G114500--Sobic009G122500 Sobic002G070600 Sobic002G070600 Sobic001G161700--Sobic002G070600 Sobic008G072200 Sobic008G072200 Sobic001G161700--Sobic008G072200 Sobic001G490500 Sobic001G490500 Sobic001G161700--Sobic001G490500 Sobic001G161700--Sobic001G012900 Sobic001G023100 Sobic001G023100 Sobic001G161700--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic001G161700--Sobic003G346400 Sobic004G000100 Sobic004G000100 Sobic001G161700--Sobic004G000100 Sobic004G254800 Sobic004G254800 Sobic001G161700--Sobic004G254800 Sobic008G085700 Sobic008G085700 Sobic001G161700--Sobic008G085700 Sobic003G189600 Sobic003G189600 Sobic005G110499--Sobic003G189600 Sobic005G110499--Sobic001G474400 Sobic005G110499--Sobic001G308400 Sobic003G394200 Sobic003G394200 Sobic005G110499--Sobic003G394200 Sobic004G053500 Sobic004G053500 Sobic005G110499--Sobic004G053500 Sobic002G401500 Sobic002G401500 Sobic005G110499--Sobic002G401500 Sobic006G021700 Sobic006G021700 Sobic005G110499--Sobic006G021700 Sobic002G371700 Sobic002G371700 Sobic005G110499--Sobic002G371700 Sobic003G209200 Sobic003G209200 Sobic005G110499--Sobic003G209200
Octagon: transcription factors


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