Gene annotation
Transcriptome id Sobic.009G003700.1
Synonym Sb09g000530, AGO1
Functional annotation PINHEAD, putative, expressed
UniProt C5YY05
Pfam PF16487 PF16488 PF08699 PF16486 PF02170 PF12764 PF02171
Panther DB PTHR22891 PTHR22891:SF34
NCBI CDD -
KEGG Orthology K11593; ELF2C, eukaryotic translation initiation factor 2C
Gene Ontology GO:0005515; protein binding GO:0003676nucleic acid binding


Orthologs (automatic annotation)
TAIR AT1G48410 : Stabilizer of iron transporter SufD / Polynucleotidyl transferase
RAP-DB (Rice) LOC_Os04g47870.1 : PINHEAD, putative, expressed
MaizeGDB (Corn) Zm00025a010194 , Zm00025a057453 , Zm00025a056788 , Zm00025a038290 , Zm00025a040993 , Zm00025a049457 , Zm00025a028371
Brachypodium PNT69195 , PNT69196 , KQJ84078 , PNT61672 , KQK00676 , KQK00677
Barley HORVU7Hr1G007000.16 , HORVU7Hr1G007000.17 , HORVU7Hr1G007000.14 , HORVU7Hr1G007000.15 , HORVU7Hr1G007000.12 , HORVU7Hr1G007000.13 , HORVU7Hr1G007000.10 , HORVU7Hr1G007000.11 , HORVU7Hr1G007000.18 , HORVU7Hr1G007000.19 , HORVU7Hr1G120600.18 , HORVU7Hr1G120600.19 , HORVU7Hr1G120600.10 , HORVU7Hr1G120600.11 , HORVU7Hr1G120600.13 , HORVU7Hr1G120600.14 , HORVU7Hr1G120600.15 , HORVU7Hr1G120600.16 , HORVU7Hr1G120600.17 , HORVU7Hr1G007000.7 , HORVU7Hr1G007000.27 , HORVU7Hr1G007000.26 , HORVU7Hr1G007000.25 , HORVU7Hr1G007000.24 , HORVU7Hr1G007000.22 , HORVU7Hr1G007000.21 , HORVU7Hr1G007000.20 , HORVU7Hr1G120600.25 , HORVU7Hr1G120600.21 , HORVU7Hr1G120600.20 , HORVU7Hr1G120600.23 , HORVU7Hr1G007000.23 , HORVU7Hr1G120600.9 , HORVU7Hr1G120600.2 , HORVU7Hr1G120600.3 , HORVU7Hr1G120600.1 , HORVU7Hr1G120600.6 , HORVU7Hr1G120600.7 , HORVU7Hr1G120600.4 , HORVU7Hr1G120600.5 , HORVU7Hr1G007000.4 , HORVU7Hr1G007000.5 , HORVU7Hr1G007000.6 , HORVU7Hr1G007000.1 , HORVU7Hr1G007000.2 , HORVU7Hr1G007000.3 , HORVU7Hr1G007000.8 , HORVU7Hr1G007000.9
Wheat TraesCSU02G065300 , TraesCSU02G065300 , TraesCSU02G065300 , TraesCS7A02G040700 , TraesCS7A02G040700 , TraesCS2B02G421000 , TraesCS2B02G421000 , TraesCS2A02G258100 , TraesCS2D02G400200 , TraesCS2D02G400200 , TraesCS6B02G270900 , TraesCS4A02G288300 , TraesCS4A02G288300 , TraesCS5B02G468000 , TraesCS2A02G258200 , TraesCS7D02G036100 , TraesCS7D02G036100 , TraesCS7D02G036100 , TraesCS7D02G036100 , TraesCS2A02G403100 , TraesCS2A02G403100 , TraesCS2A02G403100 , TraesCS2A02G403100 , TraesCS2A02G403100 , TraesCS6D02G235900 , TraesCS6D02G235900 , TraesCS7A02G040700 , TraesCS6A02G254600 , TraesCS6A02G254600 , TraesCS7A02G040700 , TraesCS7A02G040700
Populus PNT09284 , PNT09283


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G145400 expressed protein -
2 Sobic.003G050900 dolichyl-P-Man Man-PP-dolichyl mannosyltransferase, putative, expressed K03845: alpha-1,3-mannosyltransferase
3 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
4 Sobic.001G097500 expressed protein -
5 Sobic.001G118200 CASP, putative, expressed K09313: homeobox protein cut-like
6 Sobic.005G110499 - K14006: protein transport protein SEC23
7 Sobic.004G053500 HEAT repeat family protein, putative, expressed K17263: CAND1, cullin-associated NEDD8-dissociated protein 1
8 Sobic.004G147500 tetratricopeptide repeat domain containing protein, expressed K09667: protein O-GlcNAc transferase
9 Sobic.002G340900 ATMIN7, putative, expressed K13462: guanine nucleotide-exchange factor
10 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
11 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
12 Sobic.002G295500 expressed protein -
13 Sobic.001G151600 OsRhmbd9 - Putative Rhomboid homologue, expressed -
14 Sobic.005G115500 bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed K13998: dihydrofolate reductase / thymidylate synthase
15 Sobic.010G000800 PHD-finger domain containing protein, expressed -
16 Sobic.002G405500 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11841: USP10, ubiquitin carboxyl-terminal hydrolase 10
17 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
18 Sobic.001G542450 - -
19 Sobic.001G097900 expressed protein -
20 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -


Gene co-expression network
sample Sobic009G003700 Sobic009G003700 Sobic007G145400 Sobic007G145400 Sobic009G003700--Sobic007G145400 Sobic003G050900 Sobic003G050900 Sobic009G003700--Sobic003G050900 Sobic001G248100 Sobic001G248100 Sobic009G003700--Sobic001G248100 Sobic001G097500 Sobic001G097500 Sobic009G003700--Sobic001G097500 Sobic001G118200 Sobic001G118200 Sobic009G003700--Sobic001G118200 Sobic005G110499 Sobic005G110499 Sobic009G003700--Sobic005G110499 Sobic004G053500 Sobic004G053500 Sobic009G003700--Sobic004G053500 Sobic004G147500 Sobic004G147500 Sobic009G003700--Sobic004G147500 Sobic002G340900 Sobic002G340900 Sobic009G003700--Sobic002G340900 Sobic001G474400 Sobic001G474400 Sobic007G145400--Sobic001G474400 Sobic007G145400--Sobic009G003700 Sobic007G145400--Sobic001G248100 Sobic002G119600 Sobic002G119600 Sobic007G145400--Sobic002G119600 Sobic006G261400 Sobic006G261400 Sobic007G145400--Sobic006G261400 Sobic003G314700 Sobic003G314700 Sobic007G145400--Sobic003G314700 Sobic001G467100 Sobic001G467100 Sobic007G145400--Sobic001G467100 Sobic008G092800 Sobic008G092800 Sobic007G145400--Sobic008G092800 Sobic006G245900 Sobic006G245900 Sobic007G145400--Sobic006G245900 Sobic003G050900--Sobic005G110499 Sobic003G050900--Sobic009G003700 Sobic003G227100 Sobic003G227100 Sobic003G050900--Sobic003G227100 Sobic003G284000 Sobic003G284000 Sobic003G050900--Sobic003G284000 Sobic003G209200 Sobic003G209200 Sobic003G050900--Sobic003G209200 Sobic009G077600 Sobic009G077600 Sobic003G050900--Sobic009G077600 Sobic008G055900 Sobic008G055900 Sobic003G050900--Sobic008G055900 Sobic006G166200 Sobic006G166200 Sobic003G050900--Sobic006G166200 Sobic003G023300 Sobic003G023300 Sobic003G050900--Sobic003G023300 Sobic002G412700 Sobic002G412700 Sobic001G248100--Sobic002G412700 Sobic010G000800 Sobic010G000800 Sobic001G248100--Sobic010G000800 Sobic001G248100--Sobic007G145400 Sobic005G115500 Sobic005G115500 Sobic001G248100--Sobic005G115500 Sobic010G262100 Sobic010G262100 Sobic001G248100--Sobic010G262100 Sobic001G248100--Sobic006G261400 Sobic002G160700 Sobic002G160700 Sobic001G248100--Sobic002G160700 Sobic004G155600 Sobic004G155600 Sobic001G248100--Sobic004G155600 Sobic003G405500 Sobic003G405500 Sobic001G248100--Sobic003G405500 Sobic005G114500 Sobic005G114500 Sobic001G097500--Sobic005G114500 Sobic001G097500--Sobic001G474400 Sobic001G097500--Sobic009G003700 Sobic003G314300 Sobic003G314300 Sobic001G097500--Sobic003G314300 Sobic003G182300 Sobic003G182300 Sobic001G097500--Sobic003G182300 Sobic001G012900 Sobic001G012900 Sobic001G097500--Sobic001G012900 Sobic010G223400 Sobic010G223400 Sobic001G097500--Sobic010G223400 Sobic006G203300 Sobic006G203300 Sobic001G097500--Sobic006G203300 Sobic001G193100 Sobic001G193100 Sobic001G097500--Sobic001G193100 Sobic001G382600 Sobic001G382600 Sobic001G118200--Sobic001G382600 Sobic002G020700 Sobic002G020700 Sobic001G118200--Sobic002G020700 Sobic001G118200--Sobic010G000800 Sobic001G118200--Sobic009G003700 Sobic001G118200--Sobic004G053500 Sobic004G223300 Sobic004G223300 Sobic001G118200--Sobic004G223300 Sobic008G124800 Sobic008G124800 Sobic001G118200--Sobic008G124800 Sobic001G117800 Sobic001G117800 Sobic001G118200--Sobic001G117800 Sobic001G118200--Sobic002G340900 Sobic003G189600 Sobic003G189600 Sobic005G110499--Sobic003G189600 Sobic005G110499--Sobic001G474400 Sobic001G308400 Sobic001G308400 Sobic005G110499--Sobic001G308400 Sobic003G394200 Sobic003G394200 Sobic005G110499--Sobic003G394200 Sobic005G110499--Sobic004G053500 Sobic002G401500 Sobic002G401500 Sobic005G110499--Sobic002G401500 Sobic006G021700 Sobic006G021700 Sobic005G110499--Sobic006G021700 Sobic002G371700 Sobic002G371700 Sobic005G110499--Sobic002G371700 Sobic005G110499--Sobic003G209200 Sobic004G053500--Sobic002G401500 Sobic002G179400 Sobic002G179400 Sobic004G053500--Sobic002G179400 Sobic002G335600 Sobic002G335600 Sobic004G053500--Sobic002G335600 Sobic004G053500--Sobic006G166200 Sobic006G032300 Sobic006G032300 Sobic004G053500--Sobic006G032300 Sobic005G133800 Sobic005G133800 Sobic004G053500--Sobic005G133800 Sobic004G053500--Sobic002G340900 Sobic003G296900 Sobic003G296900 Sobic004G053500--Sobic003G296900 Sobic005G162500 Sobic005G162500 Sobic004G053500--Sobic005G162500 Sobic004G147500--Sobic004G223300 Sobic002G042600 Sobic002G042600 Sobic004G147500--Sobic002G042600 Sobic005G062200 Sobic005G062200 Sobic004G147500--Sobic005G062200 Sobic004G147500--Sobic003G209200 Sobic004G147500--Sobic002G340900 Sobic004G147500--Sobic009G003700 Sobic001G014300 Sobic001G014300 Sobic004G147500--Sobic001G014300 Sobic004G147500--Sobic004G053500 Sobic004G147500--Sobic006G166200 Sobic002G340900--Sobic008G124800 Sobic001G437400 Sobic001G437400 Sobic002G340900--Sobic001G437400 Sobic002G340900--Sobic006G021700 Sobic002G340900--Sobic004G053500 Sobic002G340900--Sobic001G117800 Sobic009G118900 Sobic009G118900 Sobic002G340900--Sobic009G118900 Sobic003G029600 Sobic003G029600 Sobic002G340900--Sobic003G029600 Sobic002G340900--Sobic004G223300 Sobic002G340900--Sobic001G474400
Octagon: transcription factors


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