Gene annotation
Transcriptome id Sobic.003G050900.1
Synonym AtALG3, Sb03g004440, ALG3
Functional annotation dolichyl-P-Man Man-PP-dolichyl mannosyltransferase, putative, expressed
UniProt C5XNF2
Pfam PF05208
Panther DB PTHR12646 PTHR12646:SF0
NCBI CDD KOG2762; Mannosyltransferase
KEGG Orthology K03845; alpha-1,3-mannosyltransferase
Gene Ontology GO:0016758; transferase activity, transferring hexosyl groups GO:0016021integral component of membrane GO:0005783endoplasmic reticulum


Orthologs (automatic annotation)
TAIR AT2G47760 : asparagine-linked glycosylation 3
RAP-DB (Rice) LOC_Os01g07720.4 : dolichyl-P-Man Man-PP-dolichyl mannosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a023253
Brachypodium KQK02921
Barley HORVU3Hr1G016000.10 , HORVU3Hr1G016000.11 , HORVU3Hr1G016000.12 , HORVU3Hr1G016000.13 , HORVU3Hr1G016000.2 , HORVU2Hr1G027790.1 , HORVU3Hr1G016000.8 , HORVU3Hr1G016000.9 , HORVU3Hr1G016000.6 , HORVU3Hr1G016000.7 , HORVU3Hr1G016000.4 , HORVU3Hr1G016000.5 , HORVU3Hr1G016000.3 , HORVU3Hr1G016000.1
Wheat TraesCS3D02G089900 , TraesCS3A02G089700 , TraesCS3B02G105200
Populus -


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cDNA sequences
Sobic.003G050900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G110499 - K14006: protein transport protein SEC23
2 Sobic.009G003700 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
3 Sobic.003G227100 adaptin, putative, expressed -
4 Sobic.003G284000 CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
5 Sobic.003G209200 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
6 Sobic.009G077600 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
7 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
8 Sobic.006G166200 Alg9-like mannosyltransferase protein, putative, expressed K03847: alpha-1,6-mannosyltransferase
9 Sobic.003G023300 Alg9-like mannosyltransferase protein, putative, expressed K03846: alpha-1,2-mannosyltransferase
10 Sobic.005G115500 bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed K13998: dihydrofolate reductase / thymidylate synthase
11 Sobic.006G139100 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
12 Sobic.001G542450 - -
13 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
14 Sobic.001G118200 CASP, putative, expressed K09313: homeobox protein cut-like
15 Sobic.004G208500 eukaryotic translation initiation factor 2A, putative, expressed K15026: translation initiation factor 2A
16 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
17 Sobic.004G053500 HEAT repeat family protein, putative, expressed K17263: CAND1, cullin-associated NEDD8-dissociated protein 1
18 Sobic.004G147500 tetratricopeptide repeat domain containing protein, expressed K09667: protein O-GlcNAc transferase
19 Sobic.006G056200 transport protein particle component, Bet3, domain containing protein, expressed -
20 Sobic.002G371700 signal recognition particle 68 kDa protein, putative, expressed K03107: signal recognition particle subunit SRP68


Gene co-expression network
sample Sobic003G050900 Sobic003G050900 Sobic005G110499 Sobic005G110499 Sobic003G050900--Sobic005G110499 Sobic009G003700 Sobic009G003700 Sobic003G050900--Sobic009G003700 Sobic003G227100 Sobic003G227100 Sobic003G050900--Sobic003G227100 Sobic003G284000 Sobic003G284000 Sobic003G050900--Sobic003G284000 Sobic003G209200 Sobic003G209200 Sobic003G050900--Sobic003G209200 Sobic009G077600 Sobic009G077600 Sobic003G050900--Sobic009G077600 Sobic008G055900 Sobic008G055900 Sobic003G050900--Sobic008G055900 Sobic006G166200 Sobic006G166200 Sobic003G050900--Sobic006G166200 Sobic003G023300 Sobic003G023300 Sobic003G050900--Sobic003G023300 Sobic003G189600 Sobic003G189600 Sobic005G110499--Sobic003G189600 Sobic001G474400 Sobic001G474400 Sobic005G110499--Sobic001G474400 Sobic001G308400 Sobic001G308400 Sobic005G110499--Sobic001G308400 Sobic003G394200 Sobic003G394200 Sobic005G110499--Sobic003G394200 Sobic004G053500 Sobic004G053500 Sobic005G110499--Sobic004G053500 Sobic002G401500 Sobic002G401500 Sobic005G110499--Sobic002G401500 Sobic006G021700 Sobic006G021700 Sobic005G110499--Sobic006G021700 Sobic002G371700 Sobic002G371700 Sobic005G110499--Sobic002G371700 Sobic005G110499--Sobic003G209200 Sobic007G145400 Sobic007G145400 Sobic009G003700--Sobic007G145400 Sobic009G003700--Sobic003G050900 Sobic001G248100 Sobic001G248100 Sobic009G003700--Sobic001G248100 Sobic001G097500 Sobic001G097500 Sobic009G003700--Sobic001G097500 Sobic001G118200 Sobic001G118200 Sobic009G003700--Sobic001G118200 Sobic009G003700--Sobic005G110499 Sobic009G003700--Sobic004G053500 Sobic004G147500 Sobic004G147500 Sobic009G003700--Sobic004G147500 Sobic002G340900 Sobic002G340900 Sobic009G003700--Sobic002G340900 Sobic006G224800 Sobic006G224800 Sobic003G227100--Sobic006G224800 Sobic003G227100--Sobic005G110499 Sobic003G240700 Sobic003G240700 Sobic003G227100--Sobic003G240700 Sobic001G369000 Sobic001G369000 Sobic003G227100--Sobic001G369000 Sobic003G227100--Sobic003G050900 Sobic004G261600 Sobic004G261600 Sobic003G227100--Sobic004G261600 Sobic008G040700 Sobic008G040700 Sobic003G227100--Sobic008G040700 Sobic006G056200 Sobic006G056200 Sobic003G227100--Sobic006G056200 Sobic003G227100--Sobic003G209200 Sobic003G284000--Sobic003G050900 Sobic009G208100 Sobic009G208100 Sobic003G284000--Sobic009G208100 Sobic007G042900 Sobic007G042900 Sobic003G284000--Sobic007G042900 Sobic001G034500 Sobic001G034500 Sobic003G284000--Sobic001G034500 Sobic003G284000--Sobic009G077600 Sobic003G284000--Sobic003G209200 Sobic003G284000--Sobic009G003700 Sobic006G174850 Sobic006G174850 Sobic003G284000--Sobic006G174850 Sobic003G284000--Sobic004G147500 Sobic007G005500 Sobic007G005500 Sobic003G209200--Sobic007G005500 Sobic006G260500 Sobic006G260500 Sobic003G209200--Sobic006G260500 Sobic006G077300 Sobic006G077300 Sobic003G209200--Sobic006G077300 Sobic003G209200--Sobic006G021700 Sobic005G062200 Sobic005G062200 Sobic003G209200--Sobic005G062200 Sobic004G241900 Sobic004G241900 Sobic003G209200--Sobic004G241900 Sobic003G209200--Sobic004G261600 Sobic003G209200--Sobic005G110499 Sobic003G209200--Sobic009G077600 Sobic009G077600--Sobic003G209200 Sobic009G077600--Sobic008G055900 Sobic009G077600--Sobic006G260500 Sobic004G207900 Sobic004G207900 Sobic009G077600--Sobic004G207900 Sobic004G100200 Sobic004G100200 Sobic009G077600--Sobic004G100200 Sobic006G239400 Sobic006G239400 Sobic009G077600--Sobic006G239400 Sobic009G077600--Sobic007G005500 Sobic009G077600--Sobic003G050900 Sobic010G223300 Sobic010G223300 Sobic009G077600--Sobic010G223300 Sobic002G020700 Sobic002G020700 Sobic008G055900--Sobic002G020700 Sobic008G055900--Sobic010G223300 Sobic008G103300 Sobic008G103300 Sobic008G055900--Sobic008G103300 Sobic010G020400 Sobic010G020400 Sobic008G055900--Sobic010G020400 Sobic006G136400 Sobic006G136400 Sobic008G055900--Sobic006G136400 Sobic001G447300 Sobic001G447300 Sobic008G055900--Sobic001G447300 Sobic008G085700 Sobic008G085700 Sobic008G055900--Sobic008G085700 Sobic008G055900--Sobic006G056200 Sobic008G129600 Sobic008G129600 Sobic008G055900--Sobic008G129600 Sobic005G133800 Sobic005G133800 Sobic006G166200--Sobic005G133800 Sobic006G166200--Sobic004G053500 Sobic008G124800 Sobic008G124800 Sobic006G166200--Sobic008G124800 Sobic003G405500 Sobic003G405500 Sobic006G166200--Sobic003G405500 Sobic006G166200--Sobic006G224800 Sobic001G145400 Sobic001G145400 Sobic006G166200--Sobic001G145400 Sobic010G059500 Sobic010G059500 Sobic006G166200--Sobic010G059500 Sobic002G235200 Sobic002G235200 Sobic006G166200--Sobic002G235200 Sobic009G201700 Sobic009G201700 Sobic006G166200--Sobic009G201700 Sobic003G023300--Sobic005G110499 Sobic003G023300--Sobic003G209200 Sobic003G023300--Sobic006G021700 Sobic003G023300--Sobic002G340900 Sobic003G023300--Sobic007G005500 Sobic003G023300--Sobic008G124800 Sobic003G346400 Sobic003G346400 Sobic003G023300--Sobic003G346400 Sobic004G208500 Sobic004G208500 Sobic003G023300--Sobic004G208500 Sobic010G000800 Sobic010G000800 Sobic003G023300--Sobic010G000800
Octagon: transcription factors


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