Gene annotation
Transcriptome id Sobic.001G542450.1
Synonym -
Functional annotation -
UniProt A0A1Z5SC30
Pfam PF02364
Panther DB PTHR12741 PTHR12741:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006075(1->3)-beta-D-glucan biosynthetic process GO:00038431,3-beta-D-glucan synthase activity GO:00001481,3-beta-D-glucan synthase complex


Orthologs (automatic annotation)
TAIR AT2G36850 : glucan synthase-like 8
RAP-DB (Rice) LOC_Os06g02260.2 : callose synthase, putative, expressed
MaizeGDB (Corn) Zm00025a003717
Brachypodium KQK19996
Barley HORVU7Hr1G003460.6 , HORVU7Hr1G003460.7 , HORVU7Hr1G003460.4 , HORVU7Hr1G003460.5 , HORVU7Hr1G003460.2 , HORVU7Hr1G003460.1 , HORVU7Hr1G003460.9 , HORVU7Hr1G003460.18 , HORVU7Hr1G003460.19 , HORVU7Hr1G003460.14 , HORVU7Hr1G003460.15 , HORVU7Hr1G003460.16 , HORVU7Hr1G003460.17 , HORVU7Hr1G003460.10 , HORVU7Hr1G003460.11 , HORVU7Hr1G003460.12 , HORVU7Hr1G003460.13 , HORVU7Hr1G003460.21 , HORVU7Hr1G003460.20 , HORVU7Hr1G003460.23 , HORVU7Hr1G003460.25 , HORVU7Hr1G003460.27 , HORVU7Hr1G003460.26 , HORVU7Hr1G003460.28 , HORVU7Hr1G003460.32 , HORVU7Hr1G003460.33 , HORVU7Hr1G003460.30 , HORVU7Hr1G003460.31
Wheat TraesCS7A02G030500 , TraesCS4A02G459300 , TraesCS7D02G026700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G002300 ATSIZ1/SIZ1, putative, expressed -
2 Sobic.003G416700 homeobox domain containing protein, expressed -
3 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
4 Sobic.003G217200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
5 Sobic.003G062300 NF-X1-type zinc finger protein, putative, expressed K15683: NFXL1, NF-X1-type zinc finger protein NFXL1
6 Sobic.006G224800 expressed protein -
7 Sobic.002G295500 expressed protein -
8 Sobic.001G461400 pre-mRNA-processing factor 39, putative, expressed K13217: PRPF39, pre-mRNA-processing factor 39
9 Sobic.006G166200 Alg9-like mannosyltransferase protein, putative, expressed K03847: alpha-1,6-mannosyltransferase
10 Sobic.002G374300 FAR1 family protein, expressed K17604: zinc finger SWIM domain-containing protein 3
11 Sobic.006G270600 PSF1 - Putative GINS complex subunit, expressed K10732: GINS1, GINS complex subunit 1
12 Sobic.002G245000 HECT-domain domain containing protein, expressed K10591: NEDD4, E3 ubiquitin-protein ligase NEDD4
13 Sobic.010G086600 cyclin-T1-4, putative, expressed K15188: cyclin T
14 Sobic.009G003700 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
15 Sobic.006G267600 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
16 Sobic.003G046300 ubiquitin carboxyl-terminal hydrolase 14, putative, expressed K11836: USP5_13, ubiquitin carboxyl-terminal hydrolase 5/13
17 Sobic.001G014300 OsFBDUF15 - F-box and DUF domain containing protein, expressed -
18 Sobic.001G051700 expressed protein -
19 Sobic.002G164200 PFT1, putative, expressed K15168: mediator of RNA polymerase II transcription subunit 25
20 Sobic.006G032300 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12


Gene co-expression network
sample Sobic001G542450 Sobic001G542450 Sobic008G002300 Sobic008G002300 Sobic001G542450--Sobic008G002300 Sobic003G416700 Sobic003G416700 Sobic001G542450--Sobic003G416700 Sobic002G145800 Sobic002G145800 Sobic001G542450--Sobic002G145800 Sobic003G217200 Sobic003G217200 Sobic001G542450--Sobic003G217200 Sobic003G062300 Sobic003G062300 Sobic001G542450--Sobic003G062300 Sobic006G224800 Sobic006G224800 Sobic001G542450--Sobic006G224800 Sobic002G295500 Sobic002G295500 Sobic001G542450--Sobic002G295500 Sobic001G461400 Sobic001G461400 Sobic001G542450--Sobic001G461400 Sobic006G166200 Sobic006G166200 Sobic001G542450--Sobic006G166200 Sobic007G000200 Sobic007G000200 Sobic008G002300--Sobic007G000200 Sobic008G002300--Sobic001G542450 Sobic006G088200 Sobic006G088200 Sobic008G002300--Sobic006G088200 Sobic001G178300 Sobic001G178300 Sobic008G002300--Sobic001G178300 Sobic006G032300 Sobic006G032300 Sobic008G002300--Sobic006G032300 Sobic002G029100 Sobic002G029100 Sobic008G002300--Sobic002G029100 Sobic002G256700 Sobic002G256700 Sobic008G002300--Sobic002G256700 Sobic002G245000 Sobic002G245000 Sobic008G002300--Sobic002G245000 Sobic001G493700 Sobic001G493700 Sobic008G002300--Sobic001G493700 Sobic002G154000 Sobic002G154000 Sobic003G416700--Sobic002G154000 Sobic002G264200 Sobic002G264200 Sobic003G416700--Sobic002G264200 Sobic003G416700--Sobic001G461400 Sobic007G183900 Sobic007G183900 Sobic003G416700--Sobic007G183900 Sobic001G051700 Sobic001G051700 Sobic003G416700--Sobic001G051700 Sobic003G360400 Sobic003G360400 Sobic003G416700--Sobic003G360400 Sobic009G119000 Sobic009G119000 Sobic003G416700--Sobic009G119000 Sobic001G063700 Sobic001G063700 Sobic003G416700--Sobic001G063700 Sobic010G275500 Sobic010G275500 Sobic003G416700--Sobic010G275500 Sobic006G269800 Sobic006G269800 Sobic002G145800--Sobic006G269800 Sobic002G145800--Sobic003G416700 Sobic007G183300 Sobic007G183300 Sobic002G145800--Sobic007G183300 Sobic001G087600 Sobic001G087600 Sobic002G145800--Sobic001G087600 Sobic002G145800--Sobic001G051700 Sobic002G145800--Sobic003G062300 Sobic008G147200 Sobic008G147200 Sobic002G145800--Sobic008G147200 Sobic001G023000 Sobic001G023000 Sobic002G145800--Sobic001G023000 Sobic010G186600 Sobic010G186600 Sobic002G145800--Sobic010G186600 Sobic003G217200--Sobic001G542450 Sobic003G052800 Sobic003G052800 Sobic003G217200--Sobic003G052800 Sobic002G371600 Sobic002G371600 Sobic003G217200--Sobic002G371600 Sobic003G217200--Sobic006G269800 Sobic002G374300 Sobic002G374300 Sobic003G217200--Sobic002G374300 Sobic008G088875 Sobic008G088875 Sobic003G217200--Sobic008G088875 Sobic003G217200--Sobic001G087600 Sobic001G346900 Sobic001G346900 Sobic003G217200--Sobic001G346900 Sobic002G372500 Sobic002G372500 Sobic003G217200--Sobic002G372500 Sobic003G062300--Sobic006G224800 Sobic004G309900 Sobic004G309900 Sobic003G062300--Sobic004G309900 Sobic003G062300--Sobic002G145800 Sobic003G062300--Sobic003G416700 Sobic005G220000 Sobic005G220000 Sobic003G062300--Sobic005G220000 Sobic003G062300--Sobic001G051700 Sobic002G164200 Sobic002G164200 Sobic003G062300--Sobic002G164200 Sobic003G214600 Sobic003G214600 Sobic003G062300--Sobic003G214600 Sobic003G062300--Sobic007G183300 Sobic006G224800--Sobic003G062300 Sobic006G224800--Sobic003G416700 Sobic006G224800--Sobic006G166200 Sobic003G189600 Sobic003G189600 Sobic006G224800--Sobic003G189600 Sobic004G053500 Sobic004G053500 Sobic006G224800--Sobic004G053500 Sobic009G249700 Sobic009G249700 Sobic006G224800--Sobic009G249700 Sobic004G051200 Sobic004G051200 Sobic006G224800--Sobic004G051200 Sobic006G224800--Sobic002G295500 Sobic002G430300 Sobic002G430300 Sobic006G224800--Sobic002G430300 Sobic003G104000 Sobic003G104000 Sobic002G295500--Sobic003G104000 Sobic009G044800 Sobic009G044800 Sobic002G295500--Sobic009G044800 Sobic002G295500--Sobic003G416700 Sobic002G295500--Sobic006G224800 Sobic004G353000 Sobic004G353000 Sobic002G295500--Sobic004G353000 Sobic002G295500--Sobic007G183900 Sobic006G240100 Sobic006G240100 Sobic002G295500--Sobic006G240100 Sobic007G132100 Sobic007G132100 Sobic002G295500--Sobic007G132100 Sobic006G200700 Sobic006G200700 Sobic002G295500--Sobic006G200700 Sobic001G461400--Sobic001G063700 Sobic001G461400--Sobic003G416700 Sobic001G461400--Sobic002G264200 Sobic001G461400--Sobic002G154000 Sobic001G461400--Sobic001G087600 Sobic005G200800 Sobic005G200800 Sobic001G461400--Sobic005G200800 Sobic001G461400--Sobic003G360400 Sobic002G071500 Sobic002G071500 Sobic001G461400--Sobic002G071500 Sobic010G112100 Sobic010G112100 Sobic001G461400--Sobic010G112100 Sobic005G133800 Sobic005G133800 Sobic006G166200--Sobic005G133800 Sobic006G166200--Sobic004G053500 Sobic008G124800 Sobic008G124800 Sobic006G166200--Sobic008G124800 Sobic003G405500 Sobic003G405500 Sobic006G166200--Sobic003G405500 Sobic006G166200--Sobic006G224800 Sobic001G145400 Sobic001G145400 Sobic006G166200--Sobic001G145400 Sobic010G059500 Sobic010G059500 Sobic006G166200--Sobic010G059500 Sobic002G235200 Sobic002G235200 Sobic006G166200--Sobic002G235200 Sobic009G201700 Sobic009G201700 Sobic006G166200--Sobic009G201700
Octagon: transcription factors


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