Gene annotation
Transcriptome id Sobic.001G014300.21,Sobic.001G014300.20,Sobic.001G014300.15,Sobic.001G014300.14,Sobic.001G014300.17,Sobic.001G014300.18,Sobic.001G014300.22,Sobic.001G014300.19,Sobic.001G014300.13,Sobic.001G014300.16
Synonym Sb01g001400
Functional annotation OsFBDUF15 - F-box and DUF domain containing protein, expressed
UniProt A0A1B6QGU3 , A0A1Z5S3Z1 , A0A1B6QGU8 , A0A1Z5S3W5
Pfam PF03478 PF00646 PF00646
Panther DB PTHR11102 PTHR11102:SF99
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G22660 : F-box family protein with a domain of unknown function (DUF295)
RAP-DB (Rice) LOC_Os03g40370.1 : OsFBDUF15 - F-box and DUF domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G054600 splicing factor, putative, expressed -
2 Sobic.003G312700 glycosyl hydrolase family 47 domain contain protein, expressed K10085: ER degradation enhancer, mannosidase alpha-like 2
3 Sobic.002G051750 - -
4 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
5 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
6 Sobic.006G080400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11851: ubiquitin carboxyl-terminal hydrolase 30
7 Sobic.003G163200 expressed protein K11654: SMARCA5, SNF2H, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
8 Sobic.002G154000 EDM2, putative, expressed -
9 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
10 Sobic.004G256500 WD domain, G-beta repeat domain containing protein, expressed K12616: enhancer of mRNA-decapping protein 4
11 Sobic.006G088200 nonsense-mediated decay UPF3, putative, expressed K14328: UPF3, regulator of nonsense transcripts 3
12 Sobic.004G355800 expressed protein -
13 Sobic.002G429300 importin subunit beta, putative, expressed -
14 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
15 Sobic.003G043000 expressed protein -
16 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
17 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
18 Sobic.004G147500 tetratricopeptide repeat domain containing protein, expressed K09667: protein O-GlcNAc transferase
19 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
20 Sobic.002G396500 FAT domain-containing protein, putative, expressed K08874: transformation/transcription domain-associated protein


Gene co-expression network
sample Sobic001G014300 Sobic001G014300 Sobic008G054600 Sobic008G054600 Sobic001G014300--Sobic008G054600 Sobic003G312700 Sobic003G312700 Sobic001G014300--Sobic003G312700 Sobic002G051750 Sobic002G051750 Sobic001G014300--Sobic002G051750 Sobic004G096400 Sobic004G096400 Sobic001G014300--Sobic004G096400 Sobic004G265500 Sobic004G265500 Sobic001G014300--Sobic004G265500 Sobic006G080400 Sobic006G080400 Sobic001G014300--Sobic006G080400 Sobic003G163200 Sobic003G163200 Sobic001G014300--Sobic003G163200 Sobic002G154000 Sobic002G154000 Sobic001G014300--Sobic002G154000 Sobic006G240100 Sobic006G240100 Sobic001G014300--Sobic006G240100 Sobic008G054600--Sobic001G014300 Sobic004G256500 Sobic004G256500 Sobic008G054600--Sobic004G256500 Sobic008G054600--Sobic004G096400 Sobic002G396500 Sobic002G396500 Sobic008G054600--Sobic002G396500 Sobic003G405500 Sobic003G405500 Sobic008G054600--Sobic003G405500 Sobic006G224800 Sobic006G224800 Sobic008G054600--Sobic006G224800 Sobic009G084900 Sobic009G084900 Sobic008G054600--Sobic009G084900 Sobic006G166200 Sobic006G166200 Sobic008G054600--Sobic006G166200 Sobic004G236800 Sobic004G236800 Sobic008G054600--Sobic004G236800 Sobic001G087600 Sobic001G087600 Sobic003G312700--Sobic001G087600 Sobic003G312700--Sobic001G014300 Sobic003G312700--Sobic003G405500 Sobic004G141800 Sobic004G141800 Sobic003G312700--Sobic004G141800 Sobic002G430300 Sobic002G430300 Sobic003G312700--Sobic002G430300 Sobic004G355800 Sobic004G355800 Sobic003G312700--Sobic004G355800 Sobic003G152400 Sobic003G152400 Sobic003G312700--Sobic003G152400 Sobic002G063900 Sobic002G063900 Sobic003G312700--Sobic002G063900 Sobic008G140700 Sobic008G140700 Sobic003G312700--Sobic008G140700 Sobic008G088300 Sobic008G088300 Sobic002G051750--Sobic008G088300 Sobic002G051750--Sobic001G014300 Sobic002G051750--Sobic003G312700 Sobic002G051750--Sobic004G355800 Sobic001G461400 Sobic001G461400 Sobic002G051750--Sobic001G461400 Sobic002G051750--Sobic006G240100 Sobic006G067600 Sobic006G067600 Sobic002G051750--Sobic006G067600 Sobic002G357100 Sobic002G357100 Sobic002G051750--Sobic002G357100 Sobic002G051750--Sobic001G087600 Sobic006G234700 Sobic006G234700 Sobic004G096400--Sobic006G234700 Sobic009G192300 Sobic009G192300 Sobic004G096400--Sobic009G192300 Sobic010G059500 Sobic010G059500 Sobic004G096400--Sobic010G059500 Sobic001G493200 Sobic001G493200 Sobic004G096400--Sobic001G493200 Sobic004G096400--Sobic009G084900 Sobic001G433800 Sobic001G433800 Sobic004G096400--Sobic001G433800 Sobic003G249600 Sobic003G249600 Sobic004G096400--Sobic003G249600 Sobic006G077200 Sobic006G077200 Sobic004G096400--Sobic006G077200 Sobic007G132100 Sobic007G132100 Sobic004G096400--Sobic007G132100 Sobic003G043000 Sobic003G043000 Sobic004G265500--Sobic003G043000 Sobic004G265500--Sobic003G163200 Sobic001G308400 Sobic001G308400 Sobic004G265500--Sobic001G308400 Sobic004G357100 Sobic004G357100 Sobic004G265500--Sobic004G357100 Sobic010G000800 Sobic010G000800 Sobic004G265500--Sobic010G000800 Sobic002G042600 Sobic002G042600 Sobic004G265500--Sobic002G042600 Sobic004G053500 Sobic004G053500 Sobic004G265500--Sobic004G053500 SobicK028600 SobicK028600 Sobic004G265500--SobicK028600 Sobic002G227500 Sobic002G227500 Sobic004G265500--Sobic002G227500 Sobic008G002500 Sobic008G002500 Sobic006G080400--Sobic008G002500 Sobic006G080400--Sobic001G461400 Sobic004G155600 Sobic004G155600 Sobic006G080400--Sobic004G155600 Sobic002G405500 Sobic002G405500 Sobic006G080400--Sobic002G405500 Sobic001G063700 Sobic001G063700 Sobic006G080400--Sobic001G063700 Sobic006G080400--Sobic002G154000 Sobic006G080400--Sobic004G355800 Sobic006G040800 Sobic006G040800 Sobic006G080400--Sobic006G040800 Sobic003G360400 Sobic003G360400 Sobic006G080400--Sobic003G360400 Sobic003G163200--Sobic004G265500 Sobic003G163200--Sobic002G042600 Sobic003G163200--Sobic010G000800 Sobic003G163200--Sobic003G043000 Sobic002G179400 Sobic002G179400 Sobic003G163200--Sobic002G179400 Sobic010G223100 Sobic010G223100 Sobic003G163200--Sobic010G223100 Sobic002G429300 Sobic002G429300 Sobic003G163200--Sobic002G429300 Sobic006G184900 Sobic006G184900 Sobic003G163200--Sobic006G184900 Sobic004G204100 Sobic004G204100 Sobic003G163200--Sobic004G204100 Sobic002G154000--Sobic003G360400 Sobic003G416700 Sobic003G416700 Sobic002G154000--Sobic003G416700 Sobic010G112100 Sobic010G112100 Sobic002G154000--Sobic010G112100 Sobic002G154000--Sobic001G063700 Sobic010G001100 Sobic010G001100 Sobic002G154000--Sobic010G001100 Sobic002G154000--Sobic001G461400 Sobic002G154000--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic002G154000--Sobic004G048800 Sobic007G063000 Sobic007G063000 Sobic002G154000--Sobic007G063000 Sobic009G044800 Sobic009G044800 Sobic006G240100--Sobic009G044800 Sobic006G240100--Sobic003G416700 Sobic006G240100--Sobic002G154000 Sobic006G240100--Sobic007G132100 Sobic007G218000 Sobic007G218000 Sobic006G240100--Sobic007G218000 Sobic006G240100--Sobic003G360400 Sobic010G204400 Sobic010G204400 Sobic006G240100--Sobic010G204400 Sobic001G354600 Sobic001G354600 Sobic006G240100--Sobic001G354600 Sobic004G072100 Sobic004G072100 Sobic006G240100--Sobic004G072100
Octagon: transcription factors


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