Gene annotation
Transcriptome id Sobic.001G248100.1
Synonym HAG01, HAT1, HAG1, Sb01g021950, GCN5, HAC3, BGT
Functional annotation histone acetyltransferase GCN5, putative, expressed
UniProt A0A1Z5S785
Pfam PF13508 PF00439
Panther DB PTHR22880
NCBI CDD -
KEGG Orthology K06062; PCAF, KAT2, histone acetyltransferase
Gene Ontology GO:0008080; N-acetyltransferase activity GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT3G54610 : histone acetyltransferase of the GNAT family 1
RAP-DB (Rice) LOC_Os10g28040.1 : histone acetyltransferase GCN5, putative, expressed
MaizeGDB (Corn) Zm00025a017779
Brachypodium KQJ96719
Barley HORVU1Hr1G034070.9 , HORVU1Hr1G034070.8 , HORVU1Hr1G034070.5 , HORVU1Hr1G034070.4 , HORVU1Hr1G034070.7 , HORVU1Hr1G034070.6 , HORVU1Hr1G034070.1 , HORVU1Hr1G034070.3 , HORVU1Hr1G034070.2 , HORVU1Hr1G034070.11 , HORVU1Hr1G034070.10 , HORVU1Hr1G034070.12
Wheat TraesCS1A02G138200 , TraesCS1A02G138200 , TraesCSU02G003200 , TraesCSU02G003200 , TraesCS1D02G134200 , TraesCS1D02G134200 , TraesCS1D02G134200 , TraesCS1D02G134200
Populus -


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cDNA sequences
Sobic.001G248100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G412700 histone-arginine methyltransferase CARM1, putative, expressed K05931: CARM1, type I protein arginine methyltransferase
2 Sobic.010G000800 PHD-finger domain containing protein, expressed -
3 Sobic.007G145400 expressed protein -
4 Sobic.005G115500 bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed K13998: dihydrofolate reductase / thymidylate synthase
5 Sobic.010G262100 expressed protein -
6 Sobic.006G261400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -
7 Sobic.002G160700 WD domain, G-beta repeat domain containing protein, expressed K12880: THO complex subunit 3
8 Sobic.004G155600 dnaJ domain containing protein, expressed -
9 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
10 Sobic.003G379200 wound-responsive family protein, putative, expressed -
11 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
12 Sobic.009G003700 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
13 Sobic.001G393900 FAD binding domain containing protein, expressed -
14 Sobic.006G080400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11851: ubiquitin carboxyl-terminal hydrolase 30
15 Sobic.008G157200 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
16 Sobic.001G087600 ZOS9-03 - C2H2 zinc finger protein, expressed -
17 Sobic.002G119600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
18 Sobic.004G256500 WD domain, G-beta repeat domain containing protein, expressed K12616: enhancer of mRNA-decapping protein 4
19 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
20 Sobic.003G314700 expressed protein -


Gene co-expression network
sample Sobic001G248100 Sobic001G248100 Sobic002G412700 Sobic002G412700 Sobic001G248100--Sobic002G412700 Sobic010G000800 Sobic010G000800 Sobic001G248100--Sobic010G000800 Sobic007G145400 Sobic007G145400 Sobic001G248100--Sobic007G145400 Sobic005G115500 Sobic005G115500 Sobic001G248100--Sobic005G115500 Sobic010G262100 Sobic010G262100 Sobic001G248100--Sobic010G262100 Sobic006G261400 Sobic006G261400 Sobic001G248100--Sobic006G261400 Sobic002G160700 Sobic002G160700 Sobic001G248100--Sobic002G160700 Sobic004G155600 Sobic004G155600 Sobic001G248100--Sobic004G155600 Sobic003G405500 Sobic003G405500 Sobic001G248100--Sobic003G405500 Sobic002G412700--Sobic001G248100 Sobic002G412700--Sobic003G405500 Sobic003G314700 Sobic003G314700 Sobic002G412700--Sobic003G314700 Sobic004G034700 Sobic004G034700 Sobic002G412700--Sobic004G034700 Sobic003G209400 Sobic003G209400 Sobic002G412700--Sobic003G209400 Sobic007G047600 Sobic007G047600 Sobic002G412700--Sobic007G047600 Sobic010G085200 Sobic010G085200 Sobic002G412700--Sobic010G085200 Sobic002G119600 Sobic002G119600 Sobic002G412700--Sobic002G119600 Sobic010G139500 Sobic010G139500 Sobic002G412700--Sobic010G139500 Sobic004G265500 Sobic004G265500 Sobic010G000800--Sobic004G265500 Sobic004G322400 Sobic004G322400 Sobic010G000800--Sobic004G322400 Sobic003G163200 Sobic003G163200 Sobic010G000800--Sobic003G163200 Sobic003G379200 Sobic003G379200 Sobic010G000800--Sobic003G379200 Sobic003G189600 Sobic003G189600 Sobic010G000800--Sobic003G189600 Sobic002G179400 Sobic002G179400 Sobic010G000800--Sobic002G179400 Sobic006G077200 Sobic006G077200 Sobic010G000800--Sobic006G077200 Sobic010G000800--Sobic006G261400 Sobic002G429300 Sobic002G429300 Sobic010G000800--Sobic002G429300 Sobic001G474400 Sobic001G474400 Sobic007G145400--Sobic001G474400 Sobic009G003700 Sobic009G003700 Sobic007G145400--Sobic009G003700 Sobic007G145400--Sobic001G248100 Sobic007G145400--Sobic002G119600 Sobic007G145400--Sobic006G261400 Sobic007G145400--Sobic003G314700 Sobic001G467100 Sobic001G467100 Sobic007G145400--Sobic001G467100 Sobic008G092800 Sobic008G092800 Sobic007G145400--Sobic008G092800 Sobic006G245900 Sobic006G245900 Sobic007G145400--Sobic006G245900 Sobic001G291800 Sobic001G291800 Sobic005G115500--Sobic001G291800 Sobic001G145400 Sobic001G145400 Sobic005G115500--Sobic001G145400 Sobic005G115500--Sobic001G248100 Sobic002G145800 Sobic002G145800 Sobic005G115500--Sobic002G145800 Sobic003G099300 Sobic003G099300 Sobic005G115500--Sobic003G099300 Sobic007G183300 Sobic007G183300 Sobic005G115500--Sobic007G183300 Sobic005G110499 Sobic005G110499 Sobic005G115500--Sobic005G110499 Sobic002G430300 Sobic002G430300 Sobic005G115500--Sobic002G430300 Sobic001G051700 Sobic001G051700 Sobic005G115500--Sobic001G051700 Sobic001G451300 Sobic001G451300 Sobic010G262100--Sobic001G451300 Sobic010G138900 Sobic010G138900 Sobic010G262100--Sobic010G138900 Sobic010G262100--Sobic001G248100 Sobic008G080500 Sobic008G080500 Sobic010G262100--Sobic008G080500 Sobic002G043100 Sobic002G043100 Sobic010G262100--Sobic002G043100 Sobic002G399800 Sobic002G399800 Sobic010G262100--Sobic002G399800 Sobic002G371600 Sobic002G371600 Sobic010G262100--Sobic002G371600 Sobic010G262100--Sobic003G314700 Sobic010G262100--Sobic008G092800 Sobic006G261400--Sobic003G379200 Sobic006G127600 Sobic006G127600 Sobic006G261400--Sobic006G127600 Sobic006G267600 Sobic006G267600 Sobic006G261400--Sobic006G267600 Sobic003G104000 Sobic003G104000 Sobic006G261400--Sobic003G104000 Sobic006G261400--Sobic010G000800 Sobic002G048700 Sobic002G048700 Sobic006G261400--Sobic002G048700 Sobic006G261400--Sobic001G051700 Sobic004G131300 Sobic004G131300 Sobic006G261400--Sobic004G131300 Sobic003G296900 Sobic003G296900 Sobic006G261400--Sobic003G296900 Sobic001G151600 Sobic001G151600 Sobic002G160700--Sobic001G151600 Sobic002G160700--Sobic002G371600 Sobic006G029100 Sobic006G029100 Sobic002G160700--Sobic006G029100 Sobic002G160700--Sobic001G248100 Sobic006G265600 Sobic006G265600 Sobic002G160700--Sobic006G265600 Sobic002G199400 Sobic002G199400 Sobic002G160700--Sobic002G199400 Sobic002G408900 Sobic002G408900 Sobic002G160700--Sobic002G408900 Sobic004G030400 Sobic004G030400 Sobic002G160700--Sobic004G030400 Sobic002G160700--Sobic005G115500 Sobic006G014100 Sobic006G014100 Sobic004G155600--Sobic006G014100 Sobic006G270600 Sobic006G270600 Sobic004G155600--Sobic006G270600 Sobic006G080400 Sobic006G080400 Sobic004G155600--Sobic006G080400 Sobic004G355800 Sobic004G355800 Sobic004G155600--Sobic004G355800 Sobic002G425500 Sobic002G425500 Sobic004G155600--Sobic002G425500 Sobic006G118700 Sobic006G118700 Sobic004G155600--Sobic006G118700 Sobic006G210000 Sobic006G210000 Sobic004G155600--Sobic006G210000 Sobic004G155600--Sobic002G145800 Sobic001G002600 Sobic001G002600 Sobic004G155600--Sobic001G002600 Sobic003G405500--Sobic001G145400 Sobic008G124800 Sobic008G124800 Sobic003G405500--Sobic008G124800 Sobic003G405500--Sobic002G430300 Sobic009G084900 Sobic009G084900 Sobic003G405500--Sobic009G084900 Sobic006G166200 Sobic006G166200 Sobic003G405500--Sobic006G166200 Sobic004G141800 Sobic004G141800 Sobic003G405500--Sobic004G141800 Sobic003G405500--Sobic006G077200 Sobic010G059500 Sobic010G059500 Sobic003G405500--Sobic010G059500 Sobic003G405500--Sobic003G314700
Octagon: transcription factors


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