Gene annotation
Transcriptome id Sobic.001G393900.3,Sobic.001G393900.1,Sobic.001G393900.2
Synonym EMB260, Sb01g037320, EMB2421
Functional annotation FAD binding domain containing protein, expressed
UniProt A0A1B6QNL7 , A0A1B6QNM0
Pfam PF01494
Panther DB PTHR13789 PTHR13789:SF90 PTHR13789:SF90 PTHR13789
NCBI CDD KOG3855; Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G24340 : FAD/NAD(P)-binding oxidoreductase family protein
RAP-DB (Rice) LOC_Os01g67550.1 : FAD binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002176
Brachypodium KQK11061 , KQK11062 , KQK11003
Barley HORVU3Hr1G088980.8 , HORVU3Hr1G088980.9 , HORVU3Hr1G088980.4 , HORVU3Hr1G088980.5 , HORVU3Hr1G088980.6 , HORVU3Hr1G088980.7 , HORVU3Hr1G088980.1 , HORVU3Hr1G088980.2 , HORVU3Hr1G088980.3 , HORVU3Hr1G088980.27 , HORVU3Hr1G088980.26 , HORVU3Hr1G088980.25 , HORVU3Hr1G088980.24 , HORVU3Hr1G088980.23 , HORVU3Hr1G088980.22 , HORVU3Hr1G088980.21 , HORVU3Hr1G088980.20 , HORVU3Hr1G088980.29 , HORVU3Hr1G088980.28 , HORVU3Hr1G088980.35 , HORVU3Hr1G088980.36 , HORVU3Hr1G088980.30 , HORVU3Hr1G088980.32 , HORVU3Hr1G088980.33 , HORVU3Hr1G088980.18 , HORVU3Hr1G088980.19 , HORVU3Hr1G088980.16 , HORVU3Hr1G088980.17 , HORVU3Hr1G088980.14 , HORVU3Hr1G088980.15 , HORVU3Hr1G088980.12 , HORVU3Hr1G088980.13 , HORVU3Hr1G088980.10 , HORVU3Hr1G088980.11 , HORVU3Hr1G088980.34 , HORVU3Hr1G088980.31
Wheat TraesCS3D02G387900 , TraesCS3A02G394100 , TraesCS3B02G426100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G321700 mitochondrial transcription termination factor family protein, putative, expressed K15032: mTERF domain-containing protein, mitochondrial
2 Sobic.006G267600 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
3 Sobic.001G089600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
4 Sobic.002G399800 PWWP domain containing protein, expressed -
5 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
6 Sobic.007G173500 growth regulator related protein, putative, expressed -
7 Sobic.006G269800 TFIIH basal transcription factor complex p52 subunit, putative, expressed K03144: TFIIH4, GTF2H4, transcription initiation factor TFIIH subunit 4
8 Sobic.003G309050 - -
9 Sobic.003G042400 - K12598: MTR4, ATP-dependent RNA helicase DOB1
10 Sobic.003G260400 ATP dependent DNA ligase family protein, putative, expressed K10747: DNA ligase 1
11 Sobic.003G095900 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
12 Sobic.010G094700 aberrant root formation protein 4, putative, expressed -
13 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
14 Sobic.002G043100 histone deacetylase, putative, expressed K11407: histone deacetylase 6
15 Sobic.010G174700 expressed protein -
16 Sobic.003G012000 GTPase of unknown function domain containing protein, putative, expressed -
17 Sobic.007G212300 RNA recognition motif containing protein, putative, expressed -
18 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
19 Sobic.003G188400 glutamate dehydrogenase protein, putative, expressed K00262: E1.4.1.4, glutamate dehydrogenase (NADP+)
20 Sobic.001G346900 RNA cap guanine-N2 methyltransferase domain containing protein, expressed K14292: trimethylguanosine synthase


Gene co-expression network
sample Sobic001G393900 Sobic001G393900 Sobic004G321700 Sobic004G321700 Sobic001G393900--Sobic004G321700 Sobic006G267600 Sobic006G267600 Sobic001G393900--Sobic006G267600 Sobic001G089600 Sobic001G089600 Sobic001G393900--Sobic001G089600 Sobic002G399800 Sobic002G399800 Sobic001G393900--Sobic002G399800 Sobic004G096400 Sobic004G096400 Sobic001G393900--Sobic004G096400 Sobic007G173500 Sobic007G173500 Sobic001G393900--Sobic007G173500 Sobic006G269800 Sobic006G269800 Sobic001G393900--Sobic006G269800 Sobic003G309050 Sobic003G309050 Sobic001G393900--Sobic003G309050 Sobic003G042400 Sobic003G042400 Sobic001G393900--Sobic003G042400 Sobic008G147200 Sobic008G147200 Sobic004G321700--Sobic008G147200 Sobic004G321700--Sobic001G393900 Sobic004G332400 Sobic004G332400 Sobic004G321700--Sobic004G332400 Sobic001G346900 Sobic001G346900 Sobic004G321700--Sobic001G346900 Sobic006G002800 Sobic006G002800 Sobic004G321700--Sobic006G002800 Sobic004G309900 Sobic004G309900 Sobic004G321700--Sobic004G309900 Sobic001G003500 Sobic001G003500 Sobic004G321700--Sobic001G003500 Sobic003G362900 Sobic003G362900 Sobic004G321700--Sobic003G362900 Sobic002G052700 Sobic002G052700 Sobic004G321700--Sobic002G052700 Sobic006G261400 Sobic006G261400 Sobic006G267600--Sobic006G261400 Sobic001G051700 Sobic001G051700 Sobic006G267600--Sobic001G051700 Sobic006G267600--Sobic001G393900 Sobic002G154000 Sobic002G154000 Sobic006G267600--Sobic002G154000 Sobic007G063000 Sobic007G063000 Sobic006G267600--Sobic007G063000 Sobic002G048700 Sobic002G048700 Sobic006G267600--Sobic002G048700 Sobic009G158100 Sobic009G158100 Sobic006G267600--Sobic009G158100 Sobic004G322400 Sobic004G322400 Sobic006G267600--Sobic004G322400 Sobic003G416700 Sobic003G416700 Sobic006G267600--Sobic003G416700 Sobic003G095900 Sobic003G095900 Sobic001G089600--Sobic003G095900 Sobic006G086600 Sobic006G086600 Sobic001G089600--Sobic006G086600 Sobic010G115400 Sobic010G115400 Sobic001G089600--Sobic010G115400 Sobic001G493700 Sobic001G493700 Sobic001G089600--Sobic001G493700 Sobic002G397500 Sobic002G397500 Sobic001G089600--Sobic002G397500 Sobic004G260100 Sobic004G260100 Sobic001G089600--Sobic004G260100 Sobic004G248600 Sobic004G248600 Sobic001G089600--Sobic004G248600 Sobic001G089600--Sobic004G322400 Sobic009G084900 Sobic009G084900 Sobic001G089600--Sobic009G084900 Sobic002G399800--Sobic003G095900 Sobic003G260400 Sobic003G260400 Sobic002G399800--Sobic003G260400 Sobic010G079500 Sobic010G079500 Sobic002G399800--Sobic010G079500 Sobic002G399800--Sobic004G248600 Sobic002G179400 Sobic002G179400 Sobic002G399800--Sobic002G179400 Sobic002G133300 Sobic002G133300 Sobic002G399800--Sobic002G133300 Sobic002G399800--Sobic001G089600 Sobic002G399800--Sobic001G393900 Sobic009G109200 Sobic009G109200 Sobic002G399800--Sobic009G109200 Sobic006G234700 Sobic006G234700 Sobic004G096400--Sobic006G234700 Sobic009G192300 Sobic009G192300 Sobic004G096400--Sobic009G192300 Sobic010G059500 Sobic010G059500 Sobic004G096400--Sobic010G059500 Sobic001G493200 Sobic001G493200 Sobic004G096400--Sobic001G493200 Sobic004G096400--Sobic009G084900 Sobic001G433800 Sobic001G433800 Sobic004G096400--Sobic001G433800 Sobic003G249600 Sobic003G249600 Sobic004G096400--Sobic003G249600 Sobic006G077200 Sobic006G077200 Sobic004G096400--Sobic006G077200 Sobic007G132100 Sobic007G132100 Sobic004G096400--Sobic007G132100 Sobic007G173500--Sobic001G393900 Sobic001G020000 Sobic001G020000 Sobic007G173500--Sobic001G020000 Sobic007G212300 Sobic007G212300 Sobic007G173500--Sobic007G212300 Sobic007G173500--Sobic003G095900 Sobic007G173500--Sobic003G260400 Sobic007G173500--Sobic004G309900 Sobic003G016900 Sobic003G016900 Sobic007G173500--Sobic003G016900 Sobic004G124300 Sobic004G124300 Sobic007G173500--Sobic004G124300 Sobic006G096900 Sobic006G096900 Sobic007G173500--Sobic006G096900 Sobic002G145800 Sobic002G145800 Sobic006G269800--Sobic002G145800 Sobic003G052800 Sobic003G052800 Sobic006G269800--Sobic003G052800 Sobic006G269800--Sobic008G147200 Sobic008G017100 Sobic008G017100 Sobic006G269800--Sobic008G017100 Sobic006G269800--Sobic001G393900 Sobic002G043100 Sobic002G043100 Sobic006G269800--Sobic002G043100 Sobic001G417500 Sobic001G417500 Sobic006G269800--Sobic001G417500 Sobic004G107200 Sobic004G107200 Sobic006G269800--Sobic004G107200 Sobic002G425500 Sobic002G425500 Sobic006G269800--Sobic002G425500 Sobic001G451300 Sobic001G451300 Sobic003G309050--Sobic001G451300 Sobic003G309050--Sobic001G393900 Sobic003G309050--Sobic002G043100 Sobic003G309050--Sobic002G399800 Sobic002G371600 Sobic002G371600 Sobic003G309050--Sobic002G371600 Sobic006G245900 Sobic006G245900 Sobic003G309050--Sobic006G245900 Sobic003G309050--Sobic001G417500 Sobic003G309050--Sobic003G260400 Sobic010G262100 Sobic010G262100 Sobic003G309050--Sobic010G262100 Sobic007G168300 Sobic007G168300 Sobic003G042400--Sobic007G168300 Sobic001G376900 Sobic001G376900 Sobic003G042400--Sobic001G376900 Sobic003G042400--Sobic001G346900 Sobic003G042400--Sobic009G158100 Sobic001G145400 Sobic001G145400 Sobic003G042400--Sobic001G145400 Sobic001G052400 Sobic001G052400 Sobic003G042400--Sobic001G052400 Sobic003G042400--Sobic008G147200 Sobic009G255600 Sobic009G255600 Sobic003G042400--Sobic009G255600 Sobic007G126500 Sobic007G126500 Sobic003G042400--Sobic007G126500
Octagon: transcription factors


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