Gene annotation
Transcriptome id Sobic.007G173500.1
Synonym Sb07g024570
Functional annotation growth regulator related protein, putative, expressed
UniProt C5YNB7 , A0A109NDF2 , A0A125QUH5 , Q9MUX3
Pfam PF10250
Panther DB PTHR31818 PTHR31818:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76270 : O-fucosyltransferase family protein
RAP-DB (Rice) LOC_Os08g44015.1 : growth regulator related protein, putative, expressed
MaizeGDB (Corn) Zm00025a031230 , Zm00025a047978
Brachypodium PNT68558
Barley HORVU2Hr1G096100.38 , HORVU2Hr1G096100.39 , HORVU2Hr1G096100.36 , HORVU2Hr1G096100.37 , HORVU2Hr1G096100.34 , HORVU2Hr1G096100.35 , HORVU2Hr1G096100.33 , HORVU2Hr1G096100.31 , HORVU2Hr1G096100.1 , HORVU7Hr1G058080.2 , HORVU2Hr1G096100.43 , HORVU2Hr1G096100.42 , HORVU2Hr1G096100.41 , HORVU2Hr1G096100.40 , HORVU2Hr1G096100.46 , HORVU2Hr1G096100.45 , HORVU2Hr1G096100.44 , HORVU2Hr1G096100.8 , HORVU2Hr1G096100.9 , HORVU2Hr1G096100.17 , HORVU2Hr1G096100.10 , HORVU2Hr1G096100.12 , HORVU2Hr1G096100.13 , HORVU2Hr1G096100.18 , HORVU2Hr1G096100.19 , HORVU2Hr1G096100.6 , HORVU2Hr1G096100.7 , HORVU2Hr1G096100.4 , HORVU2Hr1G096100.5 , HORVU2Hr1G096100.2 , HORVU2Hr1G096100.3 , HORVU7Hr1G058080.14 , HORVU7Hr1G058080.15 , HORVU7Hr1G058080.12 , HORVU7Hr1G058080.13 , HORVU7Hr1G058080.10 , HORVU7Hr1G058080.11 , HORVU7Hr1G058080.8 , HORVU7Hr1G058080.9 , HORVU7Hr1G058080.4 , HORVU7Hr1G058080.5 , HORVU7Hr1G058080.6 , HORVU7Hr1G058080.7 , HORVU7Hr1G058080.1 , HORVU2Hr1G096100.14 , HORVU2Hr1G096100.15 , HORVU2Hr1G096100.16 , HORVU2Hr1G096100.11 , HORVU7Hr1G058080.3 , HORVU2Hr1G096100.29 , HORVU2Hr1G096100.28 , HORVU2Hr1G096100.21 , HORVU2Hr1G096100.20 , HORVU2Hr1G096100.23 , HORVU2Hr1G096100.22 , HORVU2Hr1G096100.25 , HORVU2Hr1G096100.24 , HORVU2Hr1G096100.27 , HORVU2Hr1G096100.26
Wheat TraesCS7A02G276200 , TraesCS7D02G276100 , TraesCS7D02G276100 , TraesCS7A02G276200 , TraesCS7B02G174000 , TraesCS7B02G174000
Populus PNT47187


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cDNA sequences
Sobic.007G173500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G393900 FAD binding domain containing protein, expressed -
2 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
3 Sobic.007G212300 RNA recognition motif containing protein, putative, expressed -
4 Sobic.003G095900 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
5 Sobic.003G260400 ATP dependent DNA ligase family protein, putative, expressed K10747: DNA ligase 1
6 Sobic.004G309900 cold-induced protein, putative, expressed K13174: THO complex subunit 5
7 Sobic.003G016900 splicing factor 3B subunit 1, putative, expressed K12828: SF3B1, splicing factor 3B subunit 1
8 Sobic.004G124300 tesmin/TSO1-like CXC domain containing protein, expressed -
9 Sobic.006G096900 expressed protein -
10 Sobic.002G425500 ATPOT1, putative, expressed -
11 Sobic.006G088200 nonsense-mediated decay UPF3, putative, expressed K14328: UPF3, regulator of nonsense transcripts 3
12 Sobic.006G210000 zinc finger domain, LSD1 subclass family protein, expressed -
13 Sobic.001G398800 FHA domain containing protein, putative, expressed -
14 Sobic.007G000300 expressed protein -
15 Sobic.006G077200 ubiquitin interaction motif-containing protein, putative, expressed -
16 Sobic.001G352900 intron-binding protein aquarius, putative, expressed K12874: intron-binding protein aquarius
17 Sobic.002G317200 uncharacterized ACR, COG1590 family protein, expressed K15450: tRNA wybutosine-synthesizing protein 3
18 Sobic.001G261900 caffeine-induced death protein 1, putative, expressed -
19 Sobic.003G133900 exonuclease, putative, expressed K18417: ERI1 exoribonuclease 2
20 Sobic.003G309050 - -


Gene co-expression network
sample Sobic007G173500 Sobic007G173500 Sobic001G393900 Sobic001G393900 Sobic007G173500--Sobic001G393900 Sobic001G020000 Sobic001G020000 Sobic007G173500--Sobic001G020000 Sobic007G212300 Sobic007G212300 Sobic007G173500--Sobic007G212300 Sobic003G095900 Sobic003G095900 Sobic007G173500--Sobic003G095900 Sobic003G260400 Sobic003G260400 Sobic007G173500--Sobic003G260400 Sobic004G309900 Sobic004G309900 Sobic007G173500--Sobic004G309900 Sobic003G016900 Sobic003G016900 Sobic007G173500--Sobic003G016900 Sobic004G124300 Sobic004G124300 Sobic007G173500--Sobic004G124300 Sobic006G096900 Sobic006G096900 Sobic007G173500--Sobic006G096900 Sobic004G321700 Sobic004G321700 Sobic001G393900--Sobic004G321700 Sobic006G267600 Sobic006G267600 Sobic001G393900--Sobic006G267600 Sobic001G089600 Sobic001G089600 Sobic001G393900--Sobic001G089600 Sobic002G399800 Sobic002G399800 Sobic001G393900--Sobic002G399800 Sobic004G096400 Sobic004G096400 Sobic001G393900--Sobic004G096400 Sobic001G393900--Sobic007G173500 Sobic006G269800 Sobic006G269800 Sobic001G393900--Sobic006G269800 Sobic003G309050 Sobic003G309050 Sobic001G393900--Sobic003G309050 Sobic003G042400 Sobic003G042400 Sobic001G393900--Sobic003G042400 Sobic001G219600 Sobic001G219600 Sobic001G020000--Sobic001G219600 Sobic001G433800 Sobic001G433800 Sobic001G020000--Sobic001G433800 Sobic002G317200 Sobic002G317200 Sobic001G020000--Sobic002G317200 Sobic001G354600 Sobic001G354600 Sobic001G020000--Sobic001G354600 Sobic001G087600 Sobic001G087600 Sobic001G020000--Sobic001G087600 Sobic002G425500 Sobic002G425500 Sobic001G020000--Sobic002G425500 Sobic001G020000--Sobic003G095900 Sobic001G352900 Sobic001G352900 Sobic001G020000--Sobic001G352900 Sobic001G020000--Sobic004G124300 Sobic003G194500 Sobic003G194500 Sobic007G212300--Sobic003G194500 Sobic004G314000 Sobic004G314000 Sobic007G212300--Sobic004G314000 Sobic005G064000 Sobic005G064000 Sobic007G212300--Sobic005G064000 Sobic003G360400 Sobic003G360400 Sobic007G212300--Sobic003G360400 Sobic007G212300--Sobic003G095900 Sobic001G227400 Sobic001G227400 Sobic007G212300--Sobic001G227400 Sobic007G105100 Sobic007G105100 Sobic007G212300--Sobic007G105100 Sobic005G008800 Sobic005G008800 Sobic007G212300--Sobic005G008800 Sobic001G154900 Sobic001G154900 Sobic007G212300--Sobic001G154900 Sobic004G242400 Sobic004G242400 Sobic003G095900--Sobic004G242400 Sobic003G095900--Sobic001G433800 Sobic002G133300 Sobic002G133300 Sobic003G095900--Sobic002G133300 Sobic003G095900--Sobic001G089600 Sobic006G088200 Sobic006G088200 Sobic003G095900--Sobic006G088200 Sobic003G095900--Sobic003G360400 Sobic009G256400 Sobic009G256400 Sobic003G095900--Sobic009G256400 Sobic004G276400 Sobic004G276400 Sobic003G095900--Sobic004G276400 Sobic001G289800 Sobic001G289800 Sobic003G095900--Sobic001G289800 Sobic010G079500 Sobic010G079500 Sobic003G260400--Sobic010G079500 Sobic003G260400--Sobic003G095900 Sobic003G260400--Sobic002G399800 Sobic003G101700 Sobic003G101700 Sobic003G260400--Sobic003G101700 Sobic002G316600 Sobic002G316600 Sobic003G260400--Sobic002G316600 Sobic010G003400 Sobic010G003400 Sobic003G260400--Sobic010G003400 Sobic003G260400--Sobic001G089600 Sobic001G453400 Sobic001G453400 Sobic003G260400--Sobic001G453400 Sobic003G260400--Sobic001G393900 Sobic003G133900 Sobic003G133900 Sobic004G309900--Sobic003G133900 Sobic007G183900 Sobic007G183900 Sobic004G309900--Sobic007G183900 Sobic003G062300 Sobic003G062300 Sobic004G309900--Sobic003G062300 Sobic006G077200 Sobic006G077200 Sobic004G309900--Sobic006G077200 Sobic004G309900--Sobic004G096400 Sobic002G366400 Sobic002G366400 Sobic004G309900--Sobic002G366400 Sobic006G210000 Sobic006G210000 Sobic004G309900--Sobic006G210000 Sobic003G416700 Sobic003G416700 Sobic004G309900--Sobic003G416700 Sobic001G008200 Sobic001G008200 Sobic004G309900--Sobic001G008200 Sobic003G016900--Sobic007G173500 Sobic003G016900--Sobic004G309900 Sobic007G000300 Sobic007G000300 Sobic003G016900--Sobic007G000300 Sobic003G016900--Sobic006G088200 Sobic003G016900--Sobic003G062300 Sobic010G094700 Sobic010G094700 Sobic003G016900--Sobic010G094700 Sobic003G016900--Sobic001G393900 Sobic003G016900--Sobic003G133900 Sobic009G228000 Sobic009G228000 Sobic003G016900--Sobic009G228000 Sobic004G124300--Sobic001G020000 Sobic001G035200 Sobic001G035200 Sobic004G124300--Sobic001G035200 Sobic006G261400 Sobic006G261400 Sobic004G124300--Sobic006G261400 Sobic010G059500 Sobic010G059500 Sobic004G124300--Sobic010G059500 Sobic003G363700 Sobic003G363700 Sobic004G124300--Sobic003G363700 Sobic004G124300--Sobic007G173500 Sobic004G124300--Sobic001G087600 Sobic004G124300--Sobic009G228000 Sobic001G145400 Sobic001G145400 Sobic004G124300--Sobic001G145400 Sobic008G063300 Sobic008G063300 Sobic006G096900--Sobic008G063300 Sobic009G177500 Sobic009G177500 Sobic006G096900--Sobic009G177500 Sobic006G252900 Sobic006G252900 Sobic006G096900--Sobic006G252900 Sobic006G096900--Sobic003G360400 Sobic006G096900--Sobic003G095900 Sobic006G056700 Sobic006G056700 Sobic006G096900--Sobic006G056700 Sobic006G096900--Sobic001G433800 Sobic001G384300 Sobic001G384300 Sobic006G096900--Sobic001G384300 Sobic009G044800 Sobic009G044800 Sobic006G096900--Sobic009G044800
Octagon: transcription factors


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