Gene annotation
Transcriptome id Sobic.001G261900.2
Synonym
Functional annotation caffeine-induced death protein 1, putative, expressed
UniProt A0A1B6QLH3
Pfam PF03828
Panther DB PTHR12271 PTHR12271:SF58
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G45620 : Nucleotidyltransferase family protein
RAP-DB (Rice) LOC_Os02g02970.1 : expressed protein
MaizeGDB (Corn) Zm00025a017973
Brachypodium KQJ96403
Barley HORVU1Hr1G031950.5 , HORVU1Hr1G031950.6 , HORVU1Hr1G031950.1 , HORVU1Hr1G031950.4 , HORVU1Hr1G031950.2
Wheat TraesCS1B02G149800 , TraesCS1D02G133800 , TraesCS1A02G139400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G100800 alpha-mannosidase 2, putative, expressed K01231: alpha-mannosidase II
2 Sobic.007G212300 RNA recognition motif containing protein, putative, expressed -
3 Sobic.004G107200 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
4 Sobic.004G176000 "SDG725(Ortholog in rice:Sui et al., 2012)"(PubMedID : 31659884)@histone-lysine N-methyltransferase ASHH2, putative, expressed -
5 Sobic.006G119400 SWIM zinc finger family protein, putative, expressed -
6 Sobic.008G132900 expressed protein -
7 Sobic.004G351800 PPR repeat containing protein, expressed -
8 Sobic.007G000300 expressed protein -
9 Sobic.007G065100 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
10 Sobic.010G079500 PHD-finger domain containing protein, putative, expressed -
11 Sobic.001G529600 1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
12 Sobic.001G300100 - -
13 Sobic.007G173500 growth regulator related protein, putative, expressed -
14 Sobic.008G016300 expressed protein -
15 Sobic.007G210000 ribosomal L18p/L5e family protein, expressed -
16 Sobic.002G316600 expressed protein -
17 Sobic.001G275300 - K10899: ATP-dependent DNA helicase Q1
18 Sobic.001G393900 FAD binding domain containing protein, expressed -
19 Sobic.009G256300 DNA binding protein, putative, expressed -
20 Sobic.002G391600 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed K12854: SNRNP200, pre-mRNA-splicing helicase BRR2


Gene co-expression network
sample Sobic001G261900 Sobic001G261900 Sobic010G100800 Sobic010G100800 Sobic001G261900--Sobic010G100800 Sobic007G212300 Sobic007G212300 Sobic001G261900--Sobic007G212300 Sobic004G107200 Sobic004G107200 Sobic001G261900--Sobic004G107200 Sobic004G176000 Sobic004G176000 Sobic001G261900--Sobic004G176000 Sobic006G119400 Sobic006G119400 Sobic001G261900--Sobic006G119400 Sobic008G132900 Sobic008G132900 Sobic001G261900--Sobic008G132900 Sobic004G351800 Sobic004G351800 Sobic001G261900--Sobic004G351800 Sobic007G000300 Sobic007G000300 Sobic001G261900--Sobic007G000300 Sobic007G065100 Sobic007G065100 Sobic001G261900--Sobic007G065100 Sobic001G501300 Sobic001G501300 Sobic010G100800--Sobic001G501300 Sobic010G100800--Sobic001G261900 Sobic005G026000 Sobic005G026000 Sobic010G100800--Sobic005G026000 Sobic001G300100 Sobic001G300100 Sobic010G100800--Sobic001G300100 Sobic002G404200 Sobic002G404200 Sobic010G100800--Sobic002G404200 Sobic010G086900 Sobic010G086900 Sobic010G100800--Sobic010G086900 Sobic002G031700 Sobic002G031700 Sobic010G100800--Sobic002G031700 Sobic001G275300 Sobic001G275300 Sobic010G100800--Sobic001G275300 Sobic003G193200 Sobic003G193200 Sobic010G100800--Sobic003G193200 Sobic003G194500 Sobic003G194500 Sobic007G212300--Sobic003G194500 Sobic004G314000 Sobic004G314000 Sobic007G212300--Sobic004G314000 Sobic005G064000 Sobic005G064000 Sobic007G212300--Sobic005G064000 Sobic003G360400 Sobic003G360400 Sobic007G212300--Sobic003G360400 Sobic003G095900 Sobic003G095900 Sobic007G212300--Sobic003G095900 Sobic001G227400 Sobic001G227400 Sobic007G212300--Sobic001G227400 Sobic007G105100 Sobic007G105100 Sobic007G212300--Sobic007G105100 Sobic005G008800 Sobic005G008800 Sobic007G212300--Sobic005G008800 Sobic001G154900 Sobic001G154900 Sobic007G212300--Sobic001G154900 Sobic002G431400 Sobic002G431400 Sobic004G107200--Sobic002G431400 Sobic002G425500 Sobic002G425500 Sobic004G107200--Sobic002G425500 Sobic004G107200--Sobic006G119400 Sobic003G101500 Sobic003G101500 Sobic004G107200--Sobic003G101500 Sobic002G043100 Sobic002G043100 Sobic004G107200--Sobic002G043100 Sobic001G501800 Sobic001G501800 Sobic004G107200--Sobic001G501800 Sobic001G456900 Sobic001G456900 Sobic004G107200--Sobic001G456900 Sobic004G107200--Sobic001G261900 Sobic006G269800 Sobic006G269800 Sobic004G107200--Sobic006G269800 Sobic001G214600 Sobic001G214600 Sobic004G176000--Sobic001G214600 Sobic001G352900 Sobic001G352900 Sobic004G176000--Sobic001G352900 Sobic004G176000--Sobic001G261900 Sobic010G053600 Sobic010G053600 Sobic004G176000--Sobic010G053600 Sobic004G023100 Sobic004G023100 Sobic004G176000--Sobic004G023100 Sobic004G260100 Sobic004G260100 Sobic004G176000--Sobic004G260100 Sobic001G493200 Sobic001G493200 Sobic004G176000--Sobic001G493200 Sobic006G210000 Sobic006G210000 Sobic004G176000--Sobic006G210000 Sobic004G176000--Sobic007G212300 Sobic010G079500 Sobic010G079500 Sobic006G119400--Sobic010G079500 Sobic005G142800 Sobic005G142800 Sobic006G119400--Sobic005G142800 Sobic006G119400--Sobic004G107200 Sobic006G119400--Sobic010G053600 Sobic006G119400--Sobic002G043100 Sobic006G049900 Sobic006G049900 Sobic006G119400--Sobic006G049900 Sobic006G119400--Sobic008G132900 Sobic008G016300 Sobic008G016300 Sobic006G119400--Sobic008G016300 Sobic001G298900 Sobic001G298900 Sobic006G119400--Sobic001G298900 Sobic009G256300 Sobic009G256300 Sobic008G132900--Sobic009G256300 Sobic009G109200 Sobic009G109200 Sobic008G132900--Sobic009G109200 Sobic001G400500 Sobic001G400500 Sobic008G132900--Sobic001G400500 Sobic008G132900--Sobic010G079500 Sobic010G112100 Sobic010G112100 Sobic008G132900--Sobic010G112100 Sobic001G542400 Sobic001G542400 Sobic008G132900--Sobic001G542400 Sobic010G105200 Sobic010G105200 Sobic008G132900--Sobic010G105200 Sobic010G094700 Sobic010G094700 Sobic008G132900--Sobic010G094700 Sobic010G001100 Sobic010G001100 Sobic008G132900--Sobic010G001100 Sobic001G417500 Sobic001G417500 Sobic004G351800--Sobic001G417500 Sobic008G017100 Sobic008G017100 Sobic004G351800--Sobic008G017100 Sobic004G351800--Sobic001G261900 Sobic004G351800--Sobic006G269800 Sobic004G351800--Sobic004G107200 Sobic002G052400 Sobic002G052400 Sobic004G351800--Sobic002G052400 Sobic001G326300 Sobic001G326300 Sobic004G351800--Sobic001G326300 Sobic007G173500 Sobic007G173500 Sobic004G351800--Sobic007G173500 Sobic006G128400 Sobic006G128400 Sobic004G351800--Sobic006G128400 Sobic007G000300--Sobic001G275300 Sobic003G241700 Sobic003G241700 Sobic007G000300--Sobic003G241700 Sobic001G393900 Sobic001G393900 Sobic007G000300--Sobic001G393900 Sobic006G088200 Sobic006G088200 Sobic007G000300--Sobic006G088200 Sobic003G062300 Sobic003G062300 Sobic007G000300--Sobic003G062300 Sobic003G016900 Sobic003G016900 Sobic007G000300--Sobic003G016900 Sobic007G000300--Sobic001G261900 Sobic007G000300--Sobic007G212300 Sobic007G000300--Sobic007G173500 Sobic002G425700 Sobic002G425700 Sobic007G065100--Sobic002G425700 Sobic002G181300 Sobic002G181300 Sobic007G065100--Sobic002G181300 Sobic003G381200 Sobic003G381200 Sobic007G065100--Sobic003G381200 Sobic008G172300 Sobic008G172300 Sobic007G065100--Sobic008G172300 Sobic001G090500 Sobic001G090500 Sobic007G065100--Sobic001G090500 Sobic001G498600 Sobic001G498600 Sobic007G065100--Sobic001G498600 Sobic001G072500 Sobic001G072500 Sobic007G065100--Sobic001G072500 Sobic006G153900 Sobic006G153900 Sobic007G065100--Sobic006G153900 Sobic007G065100--Sobic006G119400
Octagon: transcription factors


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