Gene annotation
Transcriptome id Sobic.010G100800.1
Synonym GMII, ATGMII, Sb10g008770
Functional annotation alpha-mannosidase 2, putative, expressed
UniProt C5Z7K3
Pfam PF09261 PF07748 PF01074
Panther DB PTHR11607 PTHR11607:SF4
NCBI CDD -
KEGG Orthology K01231; alpha-mannosidase II
Gene Ontology GO:0008270; zinc ion binding GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds GO:0015923mannosidase activity GO:0006013mannose metabolic process GO:0005975carbohydrate metabolic process GO:0004559alpha-mannosidase activity


Orthologs (automatic annotation)
TAIR AT5G14950 : golgi alpha-mannosidase II
RAP-DB (Rice) LOC_Os06g13650.2 : alpha-mannosidase 2, putative, expressed
MaizeGDB (Corn) Zm00025a049403 , Zm00025a042652
Brachypodium KQK18760
Barley HORVU7Hr1G040290.4 , HORVU7Hr1G040290.5 , HORVU7Hr1G040290.1 , HORVU7Hr1G040290.2 , HORVU7Hr1G040290.3
Wheat TraesCS7A02G236900 , TraesCS7B02G103100 , TraesCS7B02G103100 , TraesCS7D02G199200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G501300 cell division control protein 48 homolog E, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
2 Sobic.001G261900 caffeine-induced death protein 1, putative, expressed -
3 Sobic.005G026000 expressed protein -
4 Sobic.001G300100 - -
5 Sobic.002G404200 F-box domain containing protein, expressed -
6 Sobic.010G086900 OsFBX187 - F-box domain containing protein, expressed -
7 Sobic.002G031700 - -
8 Sobic.001G275300 - K10899: ATP-dependent DNA helicase Q1
9 Sobic.003G193200 expressed protein -
10 Sobic.010G204900 formamidopyrimidine-DNA glycosylase, putative, expressed K10563: mutM, formamidopyrimidine-DNA glycosylase
11 Sobic.002G168500 NBS-LRR type disease resistance protein, putative, expressed -
12 Sobic.008G165900 similar to DEAD-box ATP-dependent RNA helicase 9(PubMedID : 29862293)@- -
13 Sobic.006G089400 cleft lip and palate transmembrane protein 1, putative, expressed -
14 Sobic.007G097400 sin-like protein conserved region containing protein, expressed K14721: RPC5, DNA-directed RNA polymerase III subunit RPC5
15 Sobic.005G140500 peptidase, M24 family protein, putative, expressed K01262: Xaa-Pro aminopeptidase
16 Sobic.001G120500 toc64, putative, expressed -
17 Sobic.009G005400 ABC transporter, ATP-binding protein, putative, expressed -
18 Sobic.008G157200 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
19 Sobic.004G144400 riboflavin biosynthesis protein ribD, putative, expressed K11752: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
20 Sobic.008G038600 pyridoxal-dependent decarboxylase protein, putative, expressed K01586: diaminopimelate decarboxylase


Gene co-expression network
sample Sobic010G100800 Sobic010G100800 Sobic001G501300 Sobic001G501300 Sobic010G100800--Sobic001G501300 Sobic001G261900 Sobic001G261900 Sobic010G100800--Sobic001G261900 Sobic005G026000 Sobic005G026000 Sobic010G100800--Sobic005G026000 Sobic001G300100 Sobic001G300100 Sobic010G100800--Sobic001G300100 Sobic002G404200 Sobic002G404200 Sobic010G100800--Sobic002G404200 Sobic010G086900 Sobic010G086900 Sobic010G100800--Sobic010G086900 Sobic002G031700 Sobic002G031700 Sobic010G100800--Sobic002G031700 Sobic001G275300 Sobic001G275300 Sobic010G100800--Sobic001G275300 Sobic003G193200 Sobic003G193200 Sobic010G100800--Sobic003G193200 Sobic001G501300--Sobic010G100800 Sobic001G207200 Sobic001G207200 Sobic001G501300--Sobic001G207200 Sobic004G262700 Sobic004G262700 Sobic001G501300--Sobic004G262700 Sobic010G176300 Sobic010G176300 Sobic001G501300--Sobic010G176300 Sobic008G165900 Sobic008G165900 Sobic001G501300--Sobic008G165900 Sobic002G167500 Sobic002G167500 Sobic001G501300--Sobic002G167500 Sobic001G501300--Sobic005G026000 Sobic001G501300--Sobic003G193200 Sobic001G501300--Sobic002G031700 Sobic001G261900--Sobic010G100800 Sobic007G212300 Sobic007G212300 Sobic001G261900--Sobic007G212300 Sobic004G107200 Sobic004G107200 Sobic001G261900--Sobic004G107200 Sobic004G176000 Sobic004G176000 Sobic001G261900--Sobic004G176000 Sobic006G119400 Sobic006G119400 Sobic001G261900--Sobic006G119400 Sobic008G132900 Sobic008G132900 Sobic001G261900--Sobic008G132900 Sobic004G351800 Sobic004G351800 Sobic001G261900--Sobic004G351800 Sobic007G000300 Sobic007G000300 Sobic001G261900--Sobic007G000300 Sobic007G065100 Sobic007G065100 Sobic001G261900--Sobic007G065100 Sobic005G026000--Sobic010G100800 Sobic003G311900 Sobic003G311900 Sobic005G026000--Sobic003G311900 Sobic005G026000--Sobic004G262700 Sobic005G026000--Sobic002G167500 Sobic004G344000 Sobic004G344000 Sobic005G026000--Sobic004G344000 Sobic001G124100 Sobic001G124100 Sobic005G026000--Sobic001G124100 Sobic003G264800 Sobic003G264800 Sobic005G026000--Sobic003G264800 Sobic001G049500 Sobic001G049500 Sobic005G026000--Sobic001G049500 Sobic003G107500 Sobic003G107500 Sobic005G026000--Sobic003G107500 Sobic008G172300 Sobic008G172300 Sobic001G300100--Sobic008G172300 Sobic007G110700 Sobic007G110700 Sobic001G300100--Sobic007G110700 Sobic001G300100--Sobic010G100800 Sobic002G339300 Sobic002G339300 Sobic001G300100--Sobic002G339300 Sobic001G300100--Sobic002G404200 Sobic009G193500 Sobic009G193500 Sobic001G300100--Sobic009G193500 Sobic001G300100--Sobic010G086900 Sobic001G300100--Sobic001G261900 Sobic001G300100--Sobic004G262700 Sobic002G404200--Sobic001G300100 Sobic002G142066 Sobic002G142066 Sobic002G404200--Sobic002G142066 Sobic002G404200--Sobic010G100800 Sobic007G029100 Sobic007G029100 Sobic002G404200--Sobic007G029100 Sobic008G193300 Sobic008G193300 Sobic002G404200--Sobic008G193300 Sobic002G404200--Sobic010G086900 Sobic001G341800 Sobic001G341800 Sobic002G404200--Sobic001G341800 Sobic001G279900 Sobic001G279900 Sobic002G404200--Sobic001G279900 Sobic009G004800 Sobic009G004800 Sobic002G404200--Sobic009G004800 Sobic001G249400 Sobic001G249400 Sobic010G086900--Sobic001G249400 Sobic009G046800 Sobic009G046800 Sobic010G086900--Sobic009G046800 Sobic010G086900--Sobic010G100800 Sobic002G378000 Sobic002G378000 Sobic010G086900--Sobic002G378000 Sobic010G086900--Sobic001G300100 Sobic004G003900 Sobic004G003900 Sobic010G086900--Sobic004G003900 Sobic010G086900--Sobic002G404200 Sobic008G067100 Sobic008G067100 Sobic010G086900--Sobic008G067100 Sobic004G019500 Sobic004G019500 Sobic010G086900--Sobic004G019500 Sobic007G075800 Sobic007G075800 Sobic002G031700--Sobic007G075800 Sobic002G155000 Sobic002G155000 Sobic002G031700--Sobic002G155000 Sobic002G031700--Sobic010G100800 Sobic002G031700--Sobic008G165900 Sobic003G134000 Sobic003G134000 Sobic002G031700--Sobic003G134000 Sobic002G031700--Sobic001G501300 Sobic007G097400 Sobic007G097400 Sobic002G031700--Sobic007G097400 Sobic002G031700--Sobic003G193200 Sobic002G031700--Sobic001G207200 Sobic006G088200 Sobic006G088200 Sobic001G275300--Sobic006G088200 Sobic003G214600 Sobic003G214600 Sobic001G275300--Sobic003G214600 Sobic001G275300--Sobic007G000300 Sobic003G095900 Sobic003G095900 Sobic001G275300--Sobic003G095900 Sobic006G056700 Sobic006G056700 Sobic001G275300--Sobic006G056700 Sobic004G158400 Sobic004G158400 Sobic001G275300--Sobic004G158400 Sobic001G058200 Sobic001G058200 Sobic001G275300--Sobic001G058200 Sobic007G159900 Sobic007G159900 Sobic001G275300--Sobic007G159900 Sobic005G167700 Sobic005G167700 Sobic001G275300--Sobic005G167700 Sobic003G193200--Sobic002G339300 Sobic002G418600 Sobic002G418600 Sobic003G193200--Sobic002G418600 Sobic003G193200--Sobic006G119400 Sobic003G193200--Sobic010G100800 Sobic009G052700 Sobic009G052700 Sobic003G193200--Sobic009G052700 Sobic003G193200--Sobic001G501300 Sobic003G193200--Sobic005G026000 Sobic003G193200--Sobic001G124100 Sobic003G193200--Sobic002G031700
Octagon: transcription factors


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