Gene annotation
Transcriptome id Sobic.005G140500.1
Synonym Sb05g020430, APP1, ATAPP1
Functional annotation peptidase, M24 family protein, putative, expressed
UniProt C5Y3S6
Pfam PF01321 PF16188 PF00557 PF16189
Panther DB PTHR10804 PTHR10804:SF87
NCBI CDD -
KEGG Orthology K01262; Xaa-Pro aminopeptidase
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT4G36760 : aminopeptidase P1
RAP-DB (Rice) LOC_Os06g45360.1 : peptidase, M24 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a015709
Brachypodium KQJ88315
Barley HORVU4Hr1G035450.9 , HORVU4Hr1G035450.8 , HORVU4Hr1G035450.1 , HORVU4Hr1G035450.3 , HORVU4Hr1G035450.2 , HORVU4Hr1G035450.5 , HORVU4Hr1G035450.4 , HORVU4Hr1G035450.7 , HORVU4Hr1G035450.6 , HORVU4Hr1G035450.11 , HORVU4Hr1G035450.10 , HORVU4Hr1G035450.12
Wheat TraesCS4A02G143700 , TraesCS4B02G152400 , TraesCS4D02G162600 , TraesCS4D02G162600 , TraesCS4B02G152400 , TraesCS4B02G152400 , TraesCS4B02G152400 , TraesCS4B02G152400 , TraesCS4B02G152400 , TraesCS4B02G152400
Populus -


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cDNA sequences
Sobic.005G140500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G262700 - -
2 Sobic.010G100800 alpha-mannosidase 2, putative, expressed K01231: alpha-mannosidase II
3 Sobic.002G428800 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
4 Sobic.010G013300 expressed protein -
5 Sobic.006G238700 C2 domain containing protein, expressed -
6 Sobic.003G194100 mitochondrial carrier protein, putative, expressed K15084: SLC25A16, GDA, solute carrier family 25 (mitochondrial carrier protein), member 16
7 Sobic.006G280000 transportin-2, putative, expressed K18752: TNPO1, IPO2, transportin-1
8 Sobic.001G396000 OsPOP7 - Putative Prolyl Oligopeptidase homologue, expressed -
9 Sobic.007G029500 expressed protein -
10 Sobic.002G131500 ABC transporter, ATP-binding protein, putative, expressed -
11 Sobic.001G501300 cell division control protein 48 homolog E, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
12 Sobic.004G290000 OsSub19 - Putative Subtilisin homologue, expressed K01280: tripeptidyl-peptidase II
13 Sobic.001G120500 toc64, putative, expressed -
14 Sobic.001G435400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
15 Sobic.002G291400 nicotinate-nucleotide pyrophosphorylase, putative, expressed K00767: nadC, nicotinate-nucleotide pyrophosphorylase (carboxylating)
16 Sobic.009G005400 ABC transporter, ATP-binding protein, putative, expressed -
17 Sobic.004G296400 amino acid permease, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
18 Sobic.008G157200 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
19 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
20 Sobic.005G026000 expressed protein -


Gene co-expression network
sample Sobic005G140500 Sobic005G140500 Sobic004G262700 Sobic004G262700 Sobic005G140500--Sobic004G262700 Sobic010G100800 Sobic010G100800 Sobic005G140500--Sobic010G100800 Sobic002G428800 Sobic002G428800 Sobic005G140500--Sobic002G428800 Sobic010G013300 Sobic010G013300 Sobic005G140500--Sobic010G013300 Sobic006G238700 Sobic006G238700 Sobic005G140500--Sobic006G238700 Sobic003G194100 Sobic003G194100 Sobic005G140500--Sobic003G194100 Sobic006G280000 Sobic006G280000 Sobic005G140500--Sobic006G280000 Sobic001G396000 Sobic001G396000 Sobic005G140500--Sobic001G396000 Sobic007G029500 Sobic007G029500 Sobic005G140500--Sobic007G029500 Sobic002G339300 Sobic002G339300 Sobic004G262700--Sobic002G339300 Sobic004G262700--Sobic001G396000 Sobic001G501300 Sobic001G501300 Sobic004G262700--Sobic001G501300 Sobic005G026000 Sobic005G026000 Sobic004G262700--Sobic005G026000 Sobic004G026500 Sobic004G026500 Sobic004G262700--Sobic004G026500 Sobic009G193500 Sobic009G193500 Sobic004G262700--Sobic009G193500 Sobic001G124100 Sobic001G124100 Sobic004G262700--Sobic001G124100 Sobic008G172300 Sobic008G172300 Sobic004G262700--Sobic008G172300 Sobic002G345700 Sobic002G345700 Sobic004G262700--Sobic002G345700 Sobic010G100800--Sobic001G501300 Sobic001G261900 Sobic001G261900 Sobic010G100800--Sobic001G261900 Sobic010G100800--Sobic005G026000 Sobic001G300100 Sobic001G300100 Sobic010G100800--Sobic001G300100 Sobic002G404200 Sobic002G404200 Sobic010G100800--Sobic002G404200 Sobic010G086900 Sobic010G086900 Sobic010G100800--Sobic010G086900 Sobic002G031700 Sobic002G031700 Sobic010G100800--Sobic002G031700 Sobic001G275300 Sobic001G275300 Sobic010G100800--Sobic001G275300 Sobic003G193200 Sobic003G193200 Sobic010G100800--Sobic003G193200 Sobic002G428800--Sobic005G140500 Sobic002G428800--Sobic004G262700 Sobic007G200900 Sobic007G200900 Sobic002G428800--Sobic007G200900 Sobic002G428800--Sobic001G501300 Sobic003G134000 Sobic003G134000 Sobic002G428800--Sobic003G134000 Sobic003G378400 Sobic003G378400 Sobic002G428800--Sobic003G378400 Sobic010G176300 Sobic010G176300 Sobic002G428800--Sobic010G176300 Sobic004G290000 Sobic004G290000 Sobic002G428800--Sobic004G290000 Sobic002G428800--Sobic010G100800 Sobic008G157200 Sobic008G157200 Sobic010G013300--Sobic008G157200 Sobic006G127600 Sobic006G127600 Sobic010G013300--Sobic006G127600 Sobic010G013300--Sobic006G280000 Sobic001G333100 Sobic001G333100 Sobic010G013300--Sobic001G333100 Sobic010G013300--Sobic005G140500 Sobic001G192000 Sobic001G192000 Sobic010G013300--Sobic001G192000 Sobic003G296900 Sobic003G296900 Sobic010G013300--Sobic003G296900 Sobic009G131300 Sobic009G131300 Sobic010G013300--Sobic009G131300 Sobic003G264100 Sobic003G264100 Sobic010G013300--Sobic003G264100 Sobic006G238700--Sobic005G140500 Sobic001G067300 Sobic001G067300 Sobic006G238700--Sobic001G067300 Sobic006G238700--Sobic006G280000 Sobic006G073200 Sobic006G073200 Sobic006G238700--Sobic006G073200 Sobic001G279900 Sobic001G279900 Sobic006G238700--Sobic001G279900 Sobic002G350600 Sobic002G350600 Sobic006G238700--Sobic002G350600 Sobic009G094700 Sobic009G094700 Sobic006G238700--Sobic009G094700 Sobic008G135200 Sobic008G135200 Sobic006G238700--Sobic008G135200 Sobic001G120500 Sobic001G120500 Sobic006G238700--Sobic001G120500 Sobic003G194100--Sobic006G280000 Sobic003G104000 Sobic003G104000 Sobic003G194100--Sobic003G104000 Sobic007G005500 Sobic007G005500 Sobic003G194100--Sobic007G005500 Sobic004G145000 Sobic004G145000 Sobic003G194100--Sobic004G145000 Sobic004G261600 Sobic004G261600 Sobic003G194100--Sobic004G261600 Sobic002G256700 Sobic002G256700 Sobic003G194100--Sobic002G256700 Sobic004G322400 Sobic004G322400 Sobic003G194100--Sobic004G322400 Sobic003G209200 Sobic003G209200 Sobic003G194100--Sobic003G209200 Sobic003G337300 Sobic003G337300 Sobic003G194100--Sobic003G337300 Sobic007G054800 Sobic007G054800 Sobic006G280000--Sobic007G054800 Sobic001G542500 Sobic001G542500 Sobic006G280000--Sobic001G542500 Sobic004G004300 Sobic004G004300 Sobic006G280000--Sobic004G004300 Sobic006G280000--Sobic002G256700 Sobic006G280000--Sobic003G337300 Sobic001G089600 Sobic001G089600 Sobic006G280000--Sobic001G089600 Sobic006G280000--Sobic003G104000 Sobic001G287500 Sobic001G287500 Sobic006G280000--Sobic001G287500 Sobic001G117200 Sobic001G117200 Sobic006G280000--Sobic001G117200 Sobic001G396000--Sobic001G124100 Sobic001G396000--Sobic004G262700 Sobic001G396000--Sobic002G345700 Sobic001G396000--Sobic002G339300 Sobic010G013200 Sobic010G013200 Sobic001G396000--Sobic010G013200 Sobic002G146300 Sobic002G146300 Sobic001G396000--Sobic002G146300 Sobic007G103100 Sobic007G103100 Sobic001G396000--Sobic007G103100 Sobic001G219700 Sobic001G219700 Sobic001G396000--Sobic001G219700 Sobic002G193100 Sobic002G193100 Sobic001G396000--Sobic002G193100 Sobic007G029500--Sobic001G501300 Sobic002G168500 Sobic002G168500 Sobic007G029500--Sobic002G168500 Sobic007G029500--Sobic005G140500 Sobic007G029500--Sobic009G193500 Sobic006G089400 Sobic006G089400 Sobic007G029500--Sobic006G089400 Sobic002G276100 Sobic002G276100 Sobic007G029500--Sobic002G276100 Sobic007G029500--Sobic008G172300 Sobic010G000600 Sobic010G000600 Sobic007G029500--Sobic010G000600 Sobic007G029500--Sobic010G100800
Octagon: transcription factors


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