Gene annotation
Transcriptome id Sobic.007G029500.1,Sobic.007G029500.2
Synonym Sb07g002570
Functional annotation expressed protein
UniProt A0A1Z5R8W8 , C5YMX7 , Q7FS91
Pfam PF01926
Panther DB PTHR14241 PTHR14241:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT4G13030 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os05g19280.1 : expressed protein
MaizeGDB (Corn) Zm00025a040400 , Zm00025a005084
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G029500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G501300 cell division control protein 48 homolog E, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
2 Sobic.002G168500 NBS-LRR type disease resistance protein, putative, expressed -
3 Sobic.005G140500 peptidase, M24 family protein, putative, expressed K01262: Xaa-Pro aminopeptidase
4 Sobic.009G193500 AGAP007115-PA, putative, expressed -
5 Sobic.006G089400 cleft lip and palate transmembrane protein 1, putative, expressed -
6 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
7 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
8 Sobic.010G000600 BBF1 - 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains with a F5/8 type C discoidin domain, expressed -
9 Sobic.010G100800 alpha-mannosidase 2, putative, expressed K01231: alpha-mannosidase II
10 Sobic.006G207200 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
11 Sobic.001G300100 - -
12 Sobic.002G167500 expressed protein -
13 Sobic.002G181300 expressed protein -
14 Sobic.007G065100 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
15 Sobic.001G207200 MEE12, putative, expressed -
16 Sobic.001G120500 toc64, putative, expressed -
17 Sobic.004G290000 OsSub19 - Putative Subtilisin homologue, expressed K01280: tripeptidyl-peptidase II
18 Sobic.003G103200 pex14, putative, expressed K13343: peroxin-14
19 Sobic.002G166300 peroxin-3 family protein, putative, expressed K13336: peroxin-3
20 Sobic.006G153900 transporter, major facilitator family, putative, expressed -


Gene co-expression network
sample Sobic007G029500 Sobic007G029500 Sobic001G501300 Sobic001G501300 Sobic007G029500--Sobic001G501300 Sobic002G168500 Sobic002G168500 Sobic007G029500--Sobic002G168500 Sobic005G140500 Sobic005G140500 Sobic007G029500--Sobic005G140500 Sobic009G193500 Sobic009G193500 Sobic007G029500--Sobic009G193500 Sobic006G089400 Sobic006G089400 Sobic007G029500--Sobic006G089400 Sobic002G276100 Sobic002G276100 Sobic007G029500--Sobic002G276100 Sobic008G172300 Sobic008G172300 Sobic007G029500--Sobic008G172300 Sobic010G000600 Sobic010G000600 Sobic007G029500--Sobic010G000600 Sobic010G100800 Sobic010G100800 Sobic007G029500--Sobic010G100800 Sobic001G501300--Sobic010G100800 Sobic001G207200 Sobic001G207200 Sobic001G501300--Sobic001G207200 Sobic004G262700 Sobic004G262700 Sobic001G501300--Sobic004G262700 Sobic010G176300 Sobic010G176300 Sobic001G501300--Sobic010G176300 Sobic008G165900 Sobic008G165900 Sobic001G501300--Sobic008G165900 Sobic002G167500 Sobic002G167500 Sobic001G501300--Sobic002G167500 Sobic005G026000 Sobic005G026000 Sobic001G501300--Sobic005G026000 Sobic003G193200 Sobic003G193200 Sobic001G501300--Sobic003G193200 Sobic002G031700 Sobic002G031700 Sobic001G501300--Sobic002G031700 Sobic002G168500--Sobic002G276100 Sobic001G124100 Sobic001G124100 Sobic002G168500--Sobic001G124100 Sobic004G026500 Sobic004G026500 Sobic002G168500--Sobic004G026500 Sobic002G168500--Sobic009G193500 Sobic002G168500--Sobic008G172300 Sobic002G339300 Sobic002G339300 Sobic002G168500--Sobic002G339300 Sobic005G014700 Sobic005G014700 Sobic002G168500--Sobic005G014700 Sobic002G168300 Sobic002G168300 Sobic002G168500--Sobic002G168300 Sobic003G381200 Sobic003G381200 Sobic002G168500--Sobic003G381200 Sobic005G140500--Sobic004G262700 Sobic005G140500--Sobic010G100800 Sobic002G428800 Sobic002G428800 Sobic005G140500--Sobic002G428800 Sobic010G013300 Sobic010G013300 Sobic005G140500--Sobic010G013300 Sobic006G238700 Sobic006G238700 Sobic005G140500--Sobic006G238700 Sobic003G194100 Sobic003G194100 Sobic005G140500--Sobic003G194100 Sobic006G280000 Sobic006G280000 Sobic005G140500--Sobic006G280000 Sobic001G396000 Sobic001G396000 Sobic005G140500--Sobic001G396000 Sobic005G140500--Sobic007G029500 Sobic009G193500--Sobic004G026500 Sobic009G193500--Sobic002G339300 Sobic009G193500--Sobic002G276100 Sobic009G193500--Sobic001G124100 Sobic007G103100 Sobic007G103100 Sobic009G193500--Sobic007G103100 Sobic009G193500--Sobic002G168500 Sobic009G193500--Sobic008G172300 Sobic001G219700 Sobic001G219700 Sobic009G193500--Sobic001G219700 Sobic006G186600 Sobic006G186600 Sobic009G193500--Sobic006G186600 Sobic006G089400--Sobic010G100800 Sobic006G058800 Sobic006G058800 Sobic006G089400--Sobic006G058800 Sobic006G089400--Sobic001G501300 Sobic010G143500 Sobic010G143500 Sobic006G089400--Sobic010G143500 Sobic006G089400--Sobic007G029500 Sobic003G134000 Sobic003G134000 Sobic006G089400--Sobic003G134000 Sobic004G176000 Sobic004G176000 Sobic006G089400--Sobic004G176000 Sobic006G089400--Sobic001G207200 Sobic002G191100 Sobic002G191100 Sobic006G089400--Sobic002G191100 Sobic002G276100--Sobic003G381200 Sobic002G276100--Sobic004G026500 Sobic004G181700 Sobic004G181700 Sobic002G276100--Sobic004G181700 Sobic001G159400 Sobic001G159400 Sobic002G276100--Sobic001G159400 Sobic010G138000 Sobic010G138000 Sobic002G276100--Sobic010G138000 Sobic002G276100--Sobic002G168500 Sobic002G276100--Sobic009G193500 Sobic002G276100--Sobic008G172300 Sobic001G268200 Sobic001G268200 Sobic002G276100--Sobic001G268200 Sobic008G172300--Sobic004G026500 Sobic009G014100 Sobic009G014100 Sobic008G172300--Sobic009G014100 Sobic003G340600 Sobic003G340600 Sobic008G172300--Sobic003G340600 Sobic002G345700 Sobic002G345700 Sobic008G172300--Sobic002G345700 Sobic008G172300--Sobic001G124100 Sobic010G197000 Sobic010G197000 Sobic008G172300--Sobic010G197000 Sobic005G142800 Sobic005G142800 Sobic008G172300--Sobic005G142800 Sobic008G172300--Sobic002G168300 Sobic008G172300--Sobic002G167500 Sobic004G131040 Sobic004G131040 Sobic010G000600--Sobic004G131040 Sobic007G110200 Sobic007G110200 Sobic010G000600--Sobic007G110200 Sobic006G153900 Sobic006G153900 Sobic010G000600--Sobic006G153900 Sobic001G300100 Sobic001G300100 Sobic010G000600--Sobic001G300100 Sobic010G000600--Sobic009G193500 Sobic004G210900 Sobic004G210900 Sobic010G000600--Sobic004G210900 Sobic010G000600--Sobic003G381200 Sobic010G000600--Sobic002G276100 Sobic002G181300 Sobic002G181300 Sobic010G000600--Sobic002G181300 Sobic010G100800--Sobic001G501300 Sobic001G261900 Sobic001G261900 Sobic010G100800--Sobic001G261900 Sobic010G100800--Sobic005G026000 Sobic010G100800--Sobic001G300100 Sobic002G404200 Sobic002G404200 Sobic010G100800--Sobic002G404200 Sobic010G086900 Sobic010G086900 Sobic010G100800--Sobic010G086900 Sobic010G100800--Sobic002G031700 Sobic001G275300 Sobic001G275300 Sobic010G100800--Sobic001G275300 Sobic010G100800--Sobic003G193200
Octagon: transcription factors


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