Gene annotation
Transcriptome id Sobic.006G207200.1
Synonym MNS1, MANIB, Sb06g027810
Functional annotation glycosyl hydrolase family 47 domain contain protein, expressed
UniProt C5YFJ2
Pfam PF01532
Panther DB PTHR11742 PTHR11742:SF42
NCBI CDD -
KEGG Orthology K01230; MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
Gene Ontology GO:0016020; membrane GO:0005509calcium ion binding GO:0004571mannosyl-oligosaccharide 1,2-alpha-mannosidase activity


Orthologs (automatic annotation)
TAIR AT1G51590 : alpha-mannosidase 1
RAP-DB (Rice) LOC_Os04g51690.1 : glycosyl hydrolase family 47 domain contain protein, expressed
MaizeGDB (Corn) Zm00025a056965 , Zm00025a009875 , Zm00025a005377
Brachypodium KQJ84444
Barley HORVU2Hr1G100750.5 , HORVU2Hr1G100750.4 , HORVU2Hr1G100750.3 , HORVU2Hr1G100750.2 , HORVU2Hr1G100750.1
Wheat TraesCS2B02G453500 , TraesCS2D02G430000 , TraesCS2D02G430000 , TraesCS2D02G430000 , TraesCS2A02G432100 , TraesCS2A02G432100 , TraesCS2B02G453500 , TraesCS2B02G453500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G276200 ACI13, putative, expressed -
2 Sobic.003G057700 WD domain, G-beta repeat domain containing protein, expressed -
3 Sobic.005G160100 RFC1 - Putative clamp loader of PCNA, replication factor C subunit 1, expressed K10754: replication factor C subunit 1
4 Sobic.003G143200 expressed protein -
5 Sobic.007G162100 TENA/THI-4 family protein, putative, expressed -
6 Sobic.001G376100 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@OsFBX72 - F-box domain containing protein, expressed -
7 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
8 Sobic.001G431000 Sel1 repeat domain containing protein, putative, expressed K14026: SEL1, SEL1 protein
9 Sobic.004G337800 UDP-glucose glycoprotein glucosyltransferase 1 precursor, putative, expressed K11718: UDP-glucose:glycoprotein glucosyltransferase
10 Sobic.004G092500 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
11 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
12 Sobic.001G214600 expressed protein -
13 Sobic.005G138300 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
14 Sobic.003G443100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
15 Sobic.003G173600 mov34/MPN/PAD-1 family protein, expressed K11866: STAMBP, STAM-binding protein
16 Sobic.010G275400 expressed protein -
17 Sobic.009G084900 expressed protein -
18 Sobic.010G140400 poor homologous synapsis 1 protein, putative, expressed -
19 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
20 Sobic.001G384400 glucosyltransferase, putative, expressed K03848: alpha-1,3-glucosyltransferase


Gene co-expression network
sample Sobic006G207200 Sobic006G207200 Sobic001G276200 Sobic001G276200 Sobic006G207200--Sobic001G276200 Sobic003G057700 Sobic003G057700 Sobic006G207200--Sobic003G057700 Sobic005G160100 Sobic005G160100 Sobic006G207200--Sobic005G160100 Sobic003G143200 Sobic003G143200 Sobic006G207200--Sobic003G143200 Sobic007G162100 Sobic007G162100 Sobic006G207200--Sobic007G162100 Sobic001G376100 Sobic001G376100 Sobic006G207200--Sobic001G376100 Sobic010G059500 Sobic010G059500 Sobic006G207200--Sobic010G059500 Sobic001G431000 Sobic001G431000 Sobic006G207200--Sobic001G431000 Sobic004G337800 Sobic004G337800 Sobic006G207200--Sobic004G337800 Sobic006G077200 Sobic006G077200 Sobic001G276200--Sobic006G077200 Sobic001G449900 Sobic001G449900 Sobic001G276200--Sobic001G449900 Sobic001G493200 Sobic001G493200 Sobic001G276200--Sobic001G493200 Sobic003G249600 Sobic003G249600 Sobic001G276200--Sobic003G249600 Sobic004G096400 Sobic004G096400 Sobic001G276200--Sobic004G096400 Sobic001G276200--Sobic006G207200 Sobic003G405500 Sobic003G405500 Sobic001G276200--Sobic003G405500 Sobic001G276200--Sobic003G057700 Sobic007G097400 Sobic007G097400 Sobic001G276200--Sobic007G097400 Sobic007G120500 Sobic007G120500 Sobic003G057700--Sobic007G120500 Sobic010G147833 Sobic010G147833 Sobic003G057700--Sobic010G147833 Sobic003G057700--Sobic003G249600 Sobic001G145400 Sobic001G145400 Sobic003G057700--Sobic001G145400 Sobic003G057700--Sobic006G077200 Sobic007G132100 Sobic007G132100 Sobic003G057700--Sobic007G132100 Sobic003G057700--Sobic001G276200 Sobic001G515100 Sobic001G515100 Sobic003G057700--Sobic001G515100 Sobic003G057700--Sobic001G493200 Sobic002G275600 Sobic002G275600 Sobic005G160100--Sobic002G275600 Sobic001G214600 Sobic001G214600 Sobic005G160100--Sobic001G214600 Sobic001G089600 Sobic001G089600 Sobic005G160100--Sobic001G089600 Sobic004G260100 Sobic004G260100 Sobic005G160100--Sobic004G260100 Sobic003G171500 Sobic003G171500 Sobic005G160100--Sobic003G171500 Sobic005G160100--Sobic004G096400 Sobic005G160100--Sobic010G059500 Sobic009G251200 Sobic009G251200 Sobic005G160100--Sobic009G251200 Sobic003G260400 Sobic003G260400 Sobic005G160100--Sobic003G260400 Sobic004G092500 Sobic004G092500 Sobic003G143200--Sobic004G092500 Sobic001G405600 Sobic001G405600 Sobic003G143200--Sobic001G405600 Sobic007G017800 Sobic007G017800 Sobic003G143200--Sobic007G017800 Sobic002G347000 Sobic002G347000 Sobic003G143200--Sobic002G347000 Sobic003G143200--Sobic007G132100 Sobic003G443100 Sobic003G443100 Sobic003G143200--Sobic003G443100 Sobic005G138300 Sobic005G138300 Sobic003G143200--Sobic005G138300 Sobic007G125000 Sobic007G125000 Sobic003G143200--Sobic007G125000 Sobic002G260400 Sobic002G260400 Sobic003G143200--Sobic002G260400 Sobic006G127600 Sobic006G127600 Sobic007G162100--Sobic006G127600 Sobic001G283600 Sobic001G283600 Sobic007G162100--Sobic001G283600 Sobic009G084900 Sobic009G084900 Sobic007G162100--Sobic009G084900 Sobic001G435400 Sobic001G435400 Sobic007G162100--Sobic001G435400 Sobic003G189600 Sobic003G189600 Sobic007G162100--Sobic003G189600 Sobic010G020400 Sobic010G020400 Sobic007G162100--Sobic010G020400 Sobic003G264100 Sobic003G264100 Sobic007G162100--Sobic003G264100 Sobic007G162100--Sobic007G132100 Sobic009G192300 Sobic009G192300 Sobic007G162100--Sobic009G192300 Sobic003G444800 Sobic003G444800 Sobic001G376100--Sobic003G444800 Sobic002G103600 Sobic002G103600 Sobic001G376100--Sobic002G103600 Sobic002G112700 Sobic002G112700 Sobic001G376100--Sobic002G112700 Sobic006G234700 Sobic006G234700 Sobic001G376100--Sobic006G234700 Sobic007G008900 Sobic007G008900 Sobic001G376100--Sobic007G008900 Sobic009G247400 Sobic009G247400 Sobic001G376100--Sobic009G247400 Sobic001G114000 Sobic001G114000 Sobic001G376100--Sobic001G114000 Sobic010G247800 Sobic010G247800 Sobic001G376100--Sobic010G247800 Sobic002G408200 Sobic002G408200 Sobic001G376100--Sobic002G408200 Sobic010G059500--Sobic009G084900 Sobic009G131300 Sobic009G131300 Sobic010G059500--Sobic009G131300 Sobic001G035200 Sobic001G035200 Sobic010G059500--Sobic001G035200 Sobic010G059500--Sobic004G096400 Sobic010G059500--Sobic006G234700 Sobic010G059500--Sobic001G145400 Sobic010G034100 Sobic010G034100 Sobic010G059500--Sobic010G034100 Sobic010G059500--Sobic006G077200 Sobic010G059500--Sobic001G493200 Sobic006G126100 Sobic006G126100 Sobic001G431000--Sobic006G126100 Sobic006G073200 Sobic006G073200 Sobic001G431000--Sobic006G073200 Sobic001G227400 Sobic001G227400 Sobic001G431000--Sobic001G227400 Sobic001G431000--Sobic006G077200 Sobic001G404600 Sobic001G404600 Sobic001G431000--Sobic001G404600 Sobic004G257100 Sobic004G257100 Sobic001G431000--Sobic004G257100 Sobic008G157200 Sobic008G157200 Sobic001G431000--Sobic008G157200 Sobic004G241900 Sobic004G241900 Sobic001G431000--Sobic004G241900 Sobic001G431000--Sobic001G449900 Sobic001G301200 Sobic001G301200 Sobic004G337800--Sobic001G301200 Sobic004G337800--Sobic010G059500 Sobic004G337800--Sobic009G084900 Sobic004G337800--Sobic003G405500 Sobic004G337800--Sobic009G131300 Sobic004G337800--Sobic001G214600 Sobic002G227500 Sobic002G227500 Sobic004G337800--Sobic002G227500 Sobic006G021700 Sobic006G021700 Sobic004G337800--Sobic006G021700 Sobic008G124800 Sobic008G124800 Sobic004G337800--Sobic008G124800
Octagon: transcription factors


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