Gene annotation
Transcriptome id Sobic.010G275400.2
Synonym Sb10g030930
Functional annotation expressed protein
UniProt A0A1W0VV49
Pfam -
Panther DB PTHR35477 PTHR35477:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g51240.1 : expressed protein
MaizeGDB (Corn) Zm00025a018549
Brachypodium KQK16645
Barley HORVU6Hr1G094720.1 , HORVU6Hr1G094720.2 , HORVU6Hr1G094720.3 , HORVU6Hr1G094750.1
Wheat -
Populus -


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cDNA sequences
Sobic.010G275400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G441400 transcription factor, putative, expressed K09060: plant G-box-binding factor
2 Sobic.010G226000 expressed protein -
3 Sobic.009G068500 expressed protein -
4 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
5 Sobic.004G252900 transcription factor IIA large subunit, putative, expressed K03122: TFIIA1, GTF2A1, transcription initiation factor TFIIA large subunit
6 Sobic.004G028100 expressed protein -
7 Sobic.008G185800 translation initiation factor IF-3, putative, expressed K02520: infC, translation initiation factor IF-3
8 Sobic.006G174850 - K15193: SPTY2D1, protein SPT2
9 Sobic.004G321100 SAC domain containing protein, putative, expressed -
10 Sobic.006G180000 syntaxin-18, putative, expressed K08492: syntaxin 18
11 Sobic.003G379200 wound-responsive family protein, putative, expressed -
12 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
13 Sobic.002G306100 ubiquinol-cytochrome C chaperone family protein, putative, expressed K17662: CBP3, cytochrome b pre-mRNA-processing protein 3
14 Sobic.003G365100 hydrolase, alpha/beta fold family, putative, expressed -
15 Sobic.003G119700 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.001G227400 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.007G093800 expressed protein -
18 Sobic.005G138300 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
19 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
20 Sobic.006G184900 tetratricopeptide repeat domain containing protein, expressed K15176: RNA polymerase-associated protein CTR9


Gene co-expression network
sample Sobic010G275400 Sobic010G275400 Sobic001G441400 Sobic001G441400 Sobic010G275400--Sobic001G441400 Sobic010G226000 Sobic010G226000 Sobic010G275400--Sobic010G226000 Sobic009G068500 Sobic009G068500 Sobic010G275400--Sobic009G068500 Sobic003G264100 Sobic003G264100 Sobic010G275400--Sobic003G264100 Sobic004G252900 Sobic004G252900 Sobic010G275400--Sobic004G252900 Sobic004G028100 Sobic004G028100 Sobic010G275400--Sobic004G028100 Sobic008G185800 Sobic008G185800 Sobic010G275400--Sobic008G185800 Sobic006G174850 Sobic006G174850 Sobic010G275400--Sobic006G174850 Sobic004G321100 Sobic004G321100 Sobic010G275400--Sobic004G321100 Sobic001G451400 Sobic001G451400 Sobic001G441400--Sobic001G451400 Sobic003G404500 Sobic003G404500 Sobic001G441400--Sobic003G404500 Sobic006G252900 Sobic006G252900 Sobic001G441400--Sobic006G252900 Sobic005G027400 Sobic005G027400 Sobic001G441400--Sobic005G027400 Sobic009G165700 Sobic009G165700 Sobic001G441400--Sobic009G165700 Sobic001G363500 Sobic001G363500 Sobic001G441400--Sobic001G363500 Sobic003G102400 Sobic003G102400 Sobic001G441400--Sobic003G102400 Sobic002G299700 Sobic002G299700 Sobic001G441400--Sobic002G299700 Sobic004G351100 Sobic004G351100 Sobic001G441400--Sobic004G351100 Sobic010G226000--Sobic001G451400 Sobic009G256400 Sobic009G256400 Sobic010G226000--Sobic009G256400 Sobic004G209700 Sobic004G209700 Sobic010G226000--Sobic004G209700 Sobic010G226000--Sobic009G165700 Sobic003G166750 Sobic003G166750 Sobic010G226000--Sobic003G166750 Sobic010G226000--Sobic001G441400 Sobic001G457800 Sobic001G457800 Sobic010G226000--Sobic001G457800 Sobic001G111850 Sobic001G111850 Sobic010G226000--Sobic001G111850 Sobic003G444800 Sobic003G444800 Sobic010G226000--Sobic003G444800 Sobic001G007000 Sobic001G007000 Sobic009G068500--Sobic001G007000 Sobic001G193300 Sobic001G193300 Sobic009G068500--Sobic001G193300 Sobic009G068500--Sobic003G264100 Sobic007G093800 Sobic007G093800 Sobic009G068500--Sobic007G093800 Sobic003G006300 Sobic003G006300 Sobic009G068500--Sobic003G006300 Sobic003G365300 Sobic003G365300 Sobic009G068500--Sobic003G365300 Sobic002G359400 Sobic002G359400 Sobic009G068500--Sobic002G359400 Sobic010G020400 Sobic010G020400 Sobic009G068500--Sobic010G020400 Sobic010G251000 Sobic010G251000 Sobic009G068500--Sobic010G251000 Sobic001G333100 Sobic001G333100 Sobic003G264100--Sobic001G333100 Sobic009G109925 Sobic009G109925 Sobic003G264100--Sobic009G109925 Sobic006G196300 Sobic006G196300 Sobic003G264100--Sobic006G196300 Sobic002G311100 Sobic002G311100 Sobic003G264100--Sobic002G311100 Sobic006G180000 Sobic006G180000 Sobic003G264100--Sobic006G180000 Sobic003G264100--Sobic009G068500 Sobic001G227400 Sobic001G227400 Sobic003G264100--Sobic001G227400 Sobic001G192000 Sobic001G192000 Sobic003G264100--Sobic001G192000 Sobic003G195000 Sobic003G195000 Sobic003G264100--Sobic003G195000 Sobic004G252900--Sobic006G196300 Sobic002G185900 Sobic002G185900 Sobic004G252900--Sobic002G185900 Sobic004G252900--Sobic003G264100 Sobic002G117400 Sobic002G117400 Sobic004G252900--Sobic002G117400 Sobic003G379200 Sobic003G379200 Sobic004G252900--Sobic003G379200 Sobic004G252900--Sobic010G275400 Sobic006G039400 Sobic006G039400 Sobic004G252900--Sobic006G039400 Sobic004G252900--Sobic004G028100 Sobic001G019800 Sobic001G019800 Sobic004G252900--Sobic001G019800 Sobic002G303600 Sobic002G303600 Sobic004G028100--Sobic002G303600 Sobic009G092400 Sobic009G092400 Sobic004G028100--Sobic009G092400 Sobic004G028100--Sobic006G180000 Sobic009G249700 Sobic009G249700 Sobic004G028100--Sobic009G249700 Sobic007G218000 Sobic007G218000 Sobic004G028100--Sobic007G218000 Sobic003G173600 Sobic003G173600 Sobic004G028100--Sobic003G173600 Sobic010G243400 Sobic010G243400 Sobic004G028100--Sobic010G243400 Sobic001G449900 Sobic001G449900 Sobic004G028100--Sobic001G449900 Sobic004G028100--Sobic003G264100 Sobic006G093300 Sobic006G093300 Sobic008G185800--Sobic006G093300 Sobic009G192300 Sobic009G192300 Sobic008G185800--Sobic009G192300 Sobic003G241700 Sobic003G241700 Sobic008G185800--Sobic003G241700 Sobic006G184900 Sobic006G184900 Sobic008G185800--Sobic006G184900 Sobic001G030000 Sobic001G030000 Sobic008G185800--Sobic001G030000 Sobic008G185800--Sobic010G226000 Sobic008G185800--Sobic010G275400 Sobic001G503900 Sobic001G503900 Sobic008G185800--Sobic001G503900 Sobic010G169900 Sobic010G169900 Sobic008G185800--Sobic010G169900 Sobic006G174850--Sobic007G218000 Sobic006G131000 Sobic006G131000 Sobic006G174850--Sobic006G131000 Sobic009G044800 Sobic009G044800 Sobic006G174850--Sobic009G044800 Sobic001G273700 Sobic001G273700 Sobic006G174850--Sobic001G273700 Sobic006G174850--Sobic003G379200 Sobic005G062200 Sobic005G062200 Sobic006G174850--Sobic005G062200 Sobic001G263600 Sobic001G263600 Sobic006G174850--Sobic001G263600 Sobic007G132100 Sobic007G132100 Sobic006G174850--Sobic007G132100 Sobic006G240100 Sobic006G240100 Sobic006G174850--Sobic006G240100 Sobic004G321100--Sobic001G441400 Sobic009G041700 Sobic009G041700 Sobic004G321100--Sobic009G041700 Sobic004G321100--Sobic003G404500 Sobic007G008900 Sobic007G008900 Sobic004G321100--Sobic007G008900 Sobic001G114000 Sobic001G114000 Sobic004G321100--Sobic001G114000 Sobic004G321100--Sobic001G451400 Sobic005G177700 Sobic005G177700 Sobic004G321100--Sobic005G177700 Sobic007G172200 Sobic007G172200 Sobic004G321100--Sobic007G172200 Sobic003G118200 Sobic003G118200 Sobic004G321100--Sobic003G118200
Octagon: transcription factors


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