Gene annotation
Transcriptome id Sobic.004G028100.1
Synonym Sb04g002470
Functional annotation expressed protein
UniProt C5XTT0
Pfam -
Panther DB PTHR37761 PTHR37761:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G15880 : -
RAP-DB (Rice) LOC_Os09g02130.1 : expressed protein
MaizeGDB (Corn) Zm00025a034990
Brachypodium KQJ93209
Barley -
Wheat TraesCS6D02G091200 , TraesCS6B02G131000 , TraesCS6A02G102600
Populus -


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cDNA sequences
Sobic.004G028100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G303600 -(PubMedID : 29147737)@RIN3, putative, expressed K10636: AMFR, autocrine motility factor receptor
2 Sobic.009G092400 zinc finger, C3HC4 type family protein, expressed -
3 Sobic.006G180000 syntaxin-18, putative, expressed K08492: syntaxin 18
4 Sobic.009G249700 expressed protein -
5 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
6 Sobic.003G173600 mov34/MPN/PAD-1 family protein, expressed K11866: STAMBP, STAM-binding protein
7 Sobic.010G243400 expressed protein -
8 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
9 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
10 Sobic.004G252900 transcription factor IIA large subunit, putative, expressed K03122: TFIIA1, GTF2A1, transcription initiation factor TFIIA large subunit
11 Sobic.010G230600 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
12 Sobic.010G275400 expressed protein -
13 Sobic.003G202600 single myb histone, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.001G405600 basic helix-loop-helix, putative, expressed K10863: aprataxin
15 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
16 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
17 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
18 Sobic.004G209700 FAR1 family protein, expressed -
19 Sobic.010G020400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
20 Sobic.007G125000 OsAPRL4 adenosine 5\'-phosphosulfate reductase-like OsAPRL4, expressed -


Gene co-expression network
sample Sobic004G028100 Sobic004G028100 Sobic002G303600 Sobic002G303600 Sobic004G028100--Sobic002G303600 Sobic009G092400 Sobic009G092400 Sobic004G028100--Sobic009G092400 Sobic006G180000 Sobic006G180000 Sobic004G028100--Sobic006G180000 Sobic009G249700 Sobic009G249700 Sobic004G028100--Sobic009G249700 Sobic007G218000 Sobic007G218000 Sobic004G028100--Sobic007G218000 Sobic003G173600 Sobic003G173600 Sobic004G028100--Sobic003G173600 Sobic010G243400 Sobic010G243400 Sobic004G028100--Sobic010G243400 Sobic001G449900 Sobic001G449900 Sobic004G028100--Sobic001G449900 Sobic003G264100 Sobic003G264100 Sobic004G028100--Sobic003G264100 Sobic010G261600 Sobic010G261600 Sobic002G303600--Sobic010G261600 Sobic004G323700 Sobic004G323700 Sobic002G303600--Sobic004G323700 Sobic004G178200 Sobic004G178200 Sobic002G303600--Sobic004G178200 Sobic002G303600--Sobic006G180000 Sobic002G303600--Sobic007G218000 Sobic002G303600--Sobic004G028100 Sobic003G422900 Sobic003G422900 Sobic002G303600--Sobic003G422900 Sobic002G303600--Sobic009G092400 Sobic004G003401 Sobic004G003401 Sobic002G303600--Sobic004G003401 Sobic009G092400--Sobic007G218000 Sobic005G160400 Sobic005G160400 Sobic009G092400--Sobic005G160400 Sobic009G044800 Sobic009G044800 Sobic009G092400--Sobic009G044800 Sobic009G092400--Sobic009G249700 Sobic007G125000 Sobic007G125000 Sobic009G092400--Sobic007G125000 Sobic004G209700 Sobic004G209700 Sobic009G092400--Sobic004G209700 Sobic009G092400--Sobic002G303600 Sobic009G092400--Sobic006G180000 Sobic007G132100 Sobic007G132100 Sobic009G092400--Sobic007G132100 Sobic006G180000--Sobic002G303600 Sobic002G047700 Sobic002G047700 Sobic006G180000--Sobic002G047700 Sobic006G180000--Sobic003G264100 Sobic010G223300 Sobic010G223300 Sobic006G180000--Sobic010G223300 Sobic006G180000--Sobic009G092400 Sobic001G007000 Sobic001G007000 Sobic006G180000--Sobic001G007000 Sobic010G020400 Sobic010G020400 Sobic006G180000--Sobic010G020400 Sobic004G092500 Sobic004G092500 Sobic006G180000--Sobic004G092500 Sobic006G180000--Sobic004G028100 Sobic009G249700--Sobic007G218000 Sobic003G093800 Sobic003G093800 Sobic009G249700--Sobic003G093800 Sobic003G189600 Sobic003G189600 Sobic009G249700--Sobic003G189600 Sobic003G394200 Sobic003G394200 Sobic009G249700--Sobic003G394200 Sobic005G034700 Sobic005G034700 Sobic009G249700--Sobic005G034700 Sobic004G345400 Sobic004G345400 Sobic009G249700--Sobic004G345400 Sobic010G169900 Sobic010G169900 Sobic009G249700--Sobic010G169900 Sobic003G444800 Sobic003G444800 Sobic009G249700--Sobic003G444800 Sobic007G042900 Sobic007G042900 Sobic009G249700--Sobic007G042900 Sobic007G218000--Sobic007G132100 Sobic004G072100 Sobic004G072100 Sobic007G218000--Sobic004G072100 Sobic002G112700 Sobic002G112700 Sobic007G218000--Sobic002G112700 Sobic006G131000 Sobic006G131000 Sobic007G218000--Sobic006G131000 Sobic007G218000--Sobic009G044800 Sobic010G204400 Sobic010G204400 Sobic007G218000--Sobic010G204400 Sobic006G012500 Sobic006G012500 Sobic007G218000--Sobic006G012500 Sobic007G218000--Sobic009G249700 Sobic007G218000--Sobic009G092400 Sobic007G162100 Sobic007G162100 Sobic003G173600--Sobic007G162100 Sobic003G173600--Sobic003G264100 Sobic003G173600--Sobic006G180000 Sobic002G262900 Sobic002G262900 Sobic003G173600--Sobic002G262900 Sobic003G173600--Sobic004G028100 Sobic003G173600--Sobic010G020400 Sobic003G173600--Sobic010G223300 Sobic003G173600--Sobic002G303600 Sobic003G243700 Sobic003G243700 Sobic003G173600--Sobic003G243700 Sobic008G165000 Sobic008G165000 Sobic010G243400--Sobic008G165000 Sobic007G056100 Sobic007G056100 Sobic010G243400--Sobic007G056100 Sobic010G243400--Sobic010G261600 Sobic010G243400--Sobic003G243700 Sobic009G041700 Sobic009G041700 Sobic010G243400--Sobic009G041700 Sobic009G224000 Sobic009G224000 Sobic010G243400--Sobic009G224000 Sobic010G243400--Sobic004G003401 Sobic008G173400 Sobic008G173400 Sobic010G243400--Sobic008G173400 Sobic001G421400 Sobic001G421400 Sobic010G243400--Sobic001G421400 Sobic001G449900--Sobic010G223300 Sobic002G020700 Sobic002G020700 Sobic001G449900--Sobic002G020700 Sobic008G085700 Sobic008G085700 Sobic001G449900--Sobic008G085700 Sobic001G301200 Sobic001G301200 Sobic001G449900--Sobic001G301200 Sobic001G449900--Sobic003G189600 Sobic001G428800 Sobic001G428800 Sobic001G449900--Sobic001G428800 Sobic003G029600 Sobic003G029600 Sobic001G449900--Sobic003G029600 Sobic001G449900--Sobic010G020400 Sobic007G005500 Sobic007G005500 Sobic001G449900--Sobic007G005500 Sobic001G333100 Sobic001G333100 Sobic003G264100--Sobic001G333100 Sobic009G109925 Sobic009G109925 Sobic003G264100--Sobic009G109925 Sobic006G196300 Sobic006G196300 Sobic003G264100--Sobic006G196300 Sobic002G311100 Sobic002G311100 Sobic003G264100--Sobic002G311100 Sobic003G264100--Sobic006G180000 Sobic009G068500 Sobic009G068500 Sobic003G264100--Sobic009G068500 Sobic001G227400 Sobic001G227400 Sobic003G264100--Sobic001G227400 Sobic001G192000 Sobic001G192000 Sobic003G264100--Sobic001G192000 Sobic003G195000 Sobic003G195000 Sobic003G264100--Sobic003G195000
Octagon: transcription factors


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