Gene annotation
Transcriptome id Sobic.003G443100.1,Sobic.003G443100.2
Synonym Sb03g047280
Functional annotation lysine ketoglutarate reductase trans-splicing related 1, putative, expressed
UniProt A0A1B6Q8G9 , C5XJD4
Pfam PF05212
Panther DB PTHR31210 PTHR31210:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67850 : Protein of unknown function (DUF707)
RAP-DB (Rice) LOC_Os01g73970.1 : lysine ketoglutarate reductase trans-splicing related 1, putative, expressed
MaizeGDB (Corn) Zm00025a025836
Brachypodium KQK11737 , KQK11738
Barley HORVU3Hr1G114290.2 , HORVU3Hr1G114290.1 , HORVU0Hr1G031960.1 , HORVU0Hr1G031960.3 , HORVU0Hr1G031960.2
Wheat TraesCS3D02G530200 , TraesCS3B02G592300 , TraesCS3A02G525000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G310200 expressed protein -
2 Sobic.003G184699 - -
3 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
4 Sobic.001G441400 transcription factor, putative, expressed K09060: plant G-box-binding factor
5 Sobic.009G245800 protein of unknown function DUF1296 domain containing protein, expressed -
6 Sobic.005G027400 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R
7 Sobic.003G141500 CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
8 Sobic.001G363500 DIRP family protein, putative, expressed -
9 Sobic.010G053800 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
10 Sobic.009G124700 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
11 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
12 Sobic.001G002000 protein kinase domain containing protein, expressed -
13 Sobic.001G219600 importin-beta N-terminal domain containing protein, expressed K15436: TRPO3, transportin-3
14 Sobic.001G114000 expressed protein -
15 Sobic.006G041600 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1
16 Sobic.010G140400 poor homologous synapsis 1 protein, putative, expressed -
17 Sobic.004G274200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
18 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
19 Sobic.002G143500 sulfate transporter 4.1, chloroplast precursor, putative, expressed K18059: sulfate transporter 4
20 Sobic.009G084900 expressed protein -


Gene co-expression network
sample Sobic003G443100 Sobic003G443100 Sobic002G310200 Sobic002G310200 Sobic003G443100--Sobic002G310200 Sobic003G184699 Sobic003G184699 Sobic003G443100--Sobic003G184699 Sobic008G047800 Sobic008G047800 Sobic003G443100--Sobic008G047800 Sobic001G441400 Sobic001G441400 Sobic003G443100--Sobic001G441400 Sobic009G245800 Sobic009G245800 Sobic003G443100--Sobic009G245800 Sobic005G027400 Sobic005G027400 Sobic003G443100--Sobic005G027400 Sobic003G141500 Sobic003G141500 Sobic003G443100--Sobic003G141500 Sobic001G363500 Sobic001G363500 Sobic003G443100--Sobic001G363500 Sobic010G053800 Sobic010G053800 Sobic003G443100--Sobic010G053800 Sobic001G222500 Sobic001G222500 Sobic002G310200--Sobic001G222500 Sobic002G310200--Sobic008G047800 Sobic007G217000 Sobic007G217000 Sobic002G310200--Sobic007G217000 Sobic004G084300 Sobic004G084300 Sobic002G310200--Sobic004G084300 Sobic007G096000 Sobic007G096000 Sobic002G310200--Sobic007G096000 Sobic010G101800 Sobic010G101800 Sobic002G310200--Sobic010G101800 Sobic002G310200--Sobic003G443100 Sobic008G067600 Sobic008G067600 Sobic002G310200--Sobic008G067600 Sobic004G067700 Sobic004G067700 Sobic002G310200--Sobic004G067700 Sobic008G162900 Sobic008G162900 Sobic003G184699--Sobic008G162900 Sobic003G184699--Sobic008G047800 Sobic003G184699--Sobic005G027400 Sobic009G126400 Sobic009G126400 Sobic003G184699--Sobic009G126400 Sobic003G184699--Sobic010G101800 Sobic007G167500 Sobic007G167500 Sobic003G184699--Sobic007G167500 Sobic003G184699--Sobic003G443100 Sobic001G083400 Sobic001G083400 Sobic003G184699--Sobic001G083400 Sobic002G309600 Sobic002G309600 Sobic003G184699--Sobic002G309600 Sobic002G006900 Sobic002G006900 Sobic008G047800--Sobic002G006900 Sobic008G047800--Sobic004G084300 Sobic001G512700 Sobic001G512700 Sobic008G047800--Sobic001G512700 Sobic001G155000 Sobic001G155000 Sobic008G047800--Sobic001G155000 Sobic009G040600 Sobic009G040600 Sobic008G047800--Sobic009G040600 Sobic007G011300 Sobic007G011300 Sobic008G047800--Sobic007G011300 Sobic008G047800--Sobic007G217000 Sobic004G274200 Sobic004G274200 Sobic008G047800--Sobic004G274200 Sobic008G047800--Sobic002G309600 Sobic001G451400 Sobic001G451400 Sobic001G441400--Sobic001G451400 Sobic003G404500 Sobic003G404500 Sobic001G441400--Sobic003G404500 Sobic006G252900 Sobic006G252900 Sobic001G441400--Sobic006G252900 Sobic001G441400--Sobic005G027400 Sobic009G165700 Sobic009G165700 Sobic001G441400--Sobic009G165700 Sobic001G441400--Sobic001G363500 Sobic003G102400 Sobic003G102400 Sobic001G441400--Sobic003G102400 Sobic002G299700 Sobic002G299700 Sobic001G441400--Sobic002G299700 Sobic004G351100 Sobic004G351100 Sobic001G441400--Sobic004G351100 Sobic009G245800--Sobic010G053800 Sobic009G245800--Sobic003G404500 Sobic004G072100 Sobic004G072100 Sobic009G245800--Sobic004G072100 Sobic009G245800--Sobic008G047800 Sobic006G208500 Sobic006G208500 Sobic009G245800--Sobic006G208500 Sobic006G195700 Sobic006G195700 Sobic009G245800--Sobic006G195700 Sobic009G245800--Sobic002G310200 Sobic004G135400 Sobic004G135400 Sobic009G245800--Sobic004G135400 Sobic009G245800--Sobic003G443100 Sobic005G027400--Sobic002G309600 Sobic004G065100 Sobic004G065100 Sobic005G027400--Sobic004G065100 Sobic005G027400--Sobic001G451400 Sobic009G132700 Sobic009G132700 Sobic005G027400--Sobic009G132700 Sobic007G117400 Sobic007G117400 Sobic005G027400--Sobic007G117400 Sobic001G219600 Sobic001G219600 Sobic005G027400--Sobic001G219600 Sobic001G289800 Sobic001G289800 Sobic005G027400--Sobic001G289800 Sobic005G027400--Sobic008G047800 Sobic004G006900 Sobic004G006900 Sobic005G027400--Sobic004G006900 Sobic003G141500--Sobic001G219600 Sobic003G141500--Sobic008G047800 Sobic009G050900 Sobic009G050900 Sobic003G141500--Sobic009G050900 Sobic001G493200 Sobic001G493200 Sobic003G141500--Sobic001G493200 Sobic002G143500 Sobic002G143500 Sobic003G141500--Sobic002G143500 Sobic003G141500--Sobic003G443100 Sobic003G141500--Sobic009G126400 Sobic001G071400 Sobic001G071400 Sobic003G141500--Sobic001G071400 Sobic006G200600 Sobic006G200600 Sobic003G141500--Sobic006G200600 Sobic005G112300 Sobic005G112300 Sobic001G363500--Sobic005G112300 Sobic007G062800 Sobic007G062800 Sobic001G363500--Sobic007G062800 Sobic010G247800 Sobic010G247800 Sobic001G363500--Sobic010G247800 Sobic001G363500--Sobic002G299700 Sobic010G112100 Sobic010G112100 Sobic001G363500--Sobic010G112100 Sobic004G242400 Sobic004G242400 Sobic001G363500--Sobic004G242400 Sobic001G433800 Sobic001G433800 Sobic001G363500--Sobic001G433800 Sobic010G279450 Sobic010G279450 Sobic001G363500--Sobic010G279450 Sobic010G139000 Sobic010G139000 Sobic001G363500--Sobic010G139000 Sobic006G012500 Sobic006G012500 Sobic010G053800--Sobic006G012500 Sobic010G275500 Sobic010G275500 Sobic010G053800--Sobic010G275500 Sobic010G053800--Sobic004G072100 Sobic010G053800--Sobic001G155000 Sobic003G187500 Sobic003G187500 Sobic010G053800--Sobic003G187500 Sobic010G053800--Sobic008G047800 Sobic010G116600 Sobic010G116600 Sobic010G053800--Sobic010G116600 Sobic006G163800 Sobic006G163800 Sobic010G053800--Sobic006G163800 Sobic004G039600 Sobic004G039600 Sobic010G053800--Sobic004G039600
Octagon: transcription factors


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