Gene annotation
Transcriptome id Sobic.002G143500.3,Sobic.002G143500.6,Sobic.002G143500.4,Sobic.002G143500.5
Synonym 1, Sb02g013390, SULTR4
Functional annotation sulfate transporter 4.1, chloroplast precursor, putative, expressed
UniProt A0A1W0W403 , A0A1W0W413 , A0A1W0W407 , A0A1W0W3U2
Pfam PF01740 PF00916 PF00916
Panther DB PTHR11814 PTHR11814:SF55
NCBI CDD KOG0236; Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family)
KEGG Orthology K18059; sulfate transporter 4
Gene Ontology GO:0016021; integral component of membrane GO:0015116sulfate transmembrane transporter activity GO:0008272sulfate transport GO:0016020membrane GO:0008271secondary active sulfate transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT5G13550 : sulfate transporter 4.1,sulfate transporter 4;2
RAP-DB (Rice) LOC_Os09g06499.1 : sulfate transporter 4.1, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a013421
Brachypodium KQJ86926 , KQJ86925
Barley HORVU5Hr1G051290.26 , HORVU5Hr1G051290.25 , HORVU5Hr1G051290.24 , HORVU5Hr1G051290.23 , HORVU5Hr1G051290.22 , HORVU5Hr1G051290.21 , HORVU5Hr1G051290.20 , HORVU5Hr1G051290.17 , HORVU5Hr1G051290.14 , HORVU5Hr1G051290.15 , HORVU5Hr1G051290.12 , HORVU5Hr1G051290.10 , HORVU5Hr1G051290.11 , HORVU5Hr1G051290.19 , HORVU5Hr1G051290.4 , HORVU5Hr1G051290.5 , HORVU5Hr1G051290.6 , HORVU5Hr1G051290.7 , HORVU5Hr1G051290.1 , HORVU5Hr1G051290.3 , HORVU5Hr1G051290.8 , HORVU5Hr1G051290.9
Wheat TraesCS5B02G163700 , TraesCS5A02G166400 , TraesCS5A02G166400 , TraesCS5D02G170900
Populus -


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cDNA sequences
Sobic.002G143500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G166600 semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed K00145: N-acetyl-gamma-glutamyl-phosphate reductase
2 Sobic.006G216800 AAA family ATPase, putative, expressed K13339: PEX6, peroxin-6
3 Sobic.001G219600 importin-beta N-terminal domain containing protein, expressed K15436: TRPO3, transportin-3
4 Sobic.006G058100 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
5 Sobic.001G071400 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
6 Sobic.007G116200 expressed protein K13217: PRPF39, pre-mRNA-processing factor 39
7 Sobic.003G141500 CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
8 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
9 Sobic.009G126400 glycine-rich protein, putative, expressed K14845: RAI1, RAT1-interacting protein
10 Sobic.K042000 non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
11 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
12 Sobic.002G134200 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
13 Sobic.009G260500 tetratricopeptide repeat containing protein, putative, expressed K14408: CSTF3, cleavage stimulation factor subunit 3
14 Sobic.001G407200 SacI homology domain containing protein, expressed -
15 Sobic.008G162900 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
16 Sobic.010G129200 - -
17 Sobic.003G443100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
18 Sobic.002G309600 DNA-binding protein, putative, expressed K14326: UPF1, regulator of nonsense transcripts 1
19 Sobic.009G047200 protein kinase domain containing protein, expressed -
20 Sobic.001G002000 protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic002G143500 Sobic002G143500 Sobic001G166600 Sobic001G166600 Sobic002G143500--Sobic001G166600 Sobic006G216800 Sobic006G216800 Sobic002G143500--Sobic006G216800 Sobic001G219600 Sobic001G219600 Sobic002G143500--Sobic001G219600 Sobic006G058100 Sobic006G058100 Sobic002G143500--Sobic006G058100 Sobic001G071400 Sobic001G071400 Sobic002G143500--Sobic001G071400 Sobic007G116200 Sobic007G116200 Sobic002G143500--Sobic007G116200 Sobic003G141500 Sobic003G141500 Sobic002G143500--Sobic003G141500 Sobic003G280800 Sobic003G280800 Sobic002G143500--Sobic003G280800 Sobic009G126400 Sobic009G126400 Sobic002G143500--Sobic009G126400 Sobic007G207200 Sobic007G207200 Sobic001G166600--Sobic007G207200 Sobic001G166600--Sobic002G143500 Sobic001G166600--Sobic006G058100 Sobic009G084900 Sobic009G084900 Sobic001G166600--Sobic009G084900 Sobic004G236400 Sobic004G236400 Sobic001G166600--Sobic004G236400 Sobic009G245800 Sobic009G245800 Sobic001G166600--Sobic009G245800 Sobic001G166600--Sobic001G219600 Sobic001G166600--Sobic003G141500 Sobic002G359400 Sobic002G359400 Sobic001G166600--Sobic002G359400 Sobic002G133400 Sobic002G133400 Sobic006G216800--Sobic002G133400 Sobic006G216800--Sobic007G116200 Sobic002G309600 Sobic002G309600 Sobic006G216800--Sobic002G309600 Sobic002G134200 Sobic002G134200 Sobic006G216800--Sobic002G134200 Sobic003G332800 Sobic003G332800 Sobic006G216800--Sobic003G332800 Sobic005G112300 Sobic005G112300 Sobic006G216800--Sobic005G112300 Sobic006G216800--Sobic003G280800 Sobic010G139000 Sobic010G139000 Sobic006G216800--Sobic010G139000 Sobic010G277500 Sobic010G277500 Sobic006G216800--Sobic010G277500 Sobic009G260500 Sobic009G260500 Sobic001G219600--Sobic009G260500 Sobic001G219600--Sobic002G309600 Sobic002G317200 Sobic002G317200 Sobic001G219600--Sobic002G317200 Sobic009G047200 Sobic009G047200 Sobic001G219600--Sobic009G047200 Sobic001G219600--Sobic003G141500 Sobic001G219600--Sobic010G139000 Sobic001G219600--Sobic001G071400 Sobic002G397500 Sobic002G397500 Sobic001G219600--Sobic002G397500 Sobic001G020000 Sobic001G020000 Sobic001G219600--Sobic001G020000 Sobic006G058100--Sobic002G143500 Sobic003G067100 Sobic003G067100 Sobic006G058100--Sobic003G067100 Sobic003G040000 Sobic003G040000 Sobic006G058100--Sobic003G040000 Sobic006G058100--Sobic001G166600 Sobic006G058100--Sobic004G236400 Sobic001G261573 Sobic001G261573 Sobic006G058100--Sobic001G261573 Sobic010G176550 Sobic010G176550 Sobic006G058100--Sobic010G176550 Sobic004G225600 Sobic004G225600 Sobic006G058100--Sobic004G225600 Sobic009G094900 Sobic009G094900 Sobic006G058100--Sobic009G094900 Sobic001G071400--Sobic002G134200 Sobic001G071400--Sobic002G309600 Sobic001G071400--Sobic003G280800 Sobic008G047800 Sobic008G047800 Sobic001G071400--Sobic008G047800 Sobic009G191000 Sobic009G191000 Sobic001G071400--Sobic009G191000 Sobic001G071400--Sobic001G219600 Sobic001G071400--Sobic005G112300 Sobic002G315200 Sobic002G315200 Sobic001G071400--Sobic002G315200 Sobic002G008900 Sobic002G008900 Sobic001G071400--Sobic002G008900 Sobic007G116200--Sobic006G216800 Sobic010G010700 Sobic010G010700 Sobic007G116200--Sobic010G010700 Sobic007G116200--Sobic002G134200 Sobic006G182900 Sobic006G182900 Sobic007G116200--Sobic006G182900 Sobic004G359800 Sobic004G359800 Sobic007G116200--Sobic004G359800 Sobic007G116200--Sobic010G139000 Sobic010G256700 Sobic010G256700 Sobic007G116200--Sobic010G256700 Sobic004G209600 Sobic004G209600 Sobic007G116200--Sobic004G209600 Sobic007G116200--Sobic003G280800 Sobic003G141500--Sobic001G219600 Sobic003G141500--Sobic008G047800 Sobic009G050900 Sobic009G050900 Sobic003G141500--Sobic009G050900 Sobic001G493200 Sobic001G493200 Sobic003G141500--Sobic001G493200 Sobic003G141500--Sobic002G143500 Sobic003G443100 Sobic003G443100 Sobic003G141500--Sobic003G443100 Sobic003G141500--Sobic009G126400 Sobic003G141500--Sobic001G071400 Sobic006G200600 Sobic006G200600 Sobic003G141500--Sobic006G200600 Sobic003G280800--Sobic002G309600 Sobic003G280800--Sobic001G071400 Sobic003G280800--Sobic002G134200 Sobic006G209850 Sobic006G209850 Sobic003G280800--Sobic006G209850 Sobic003G119000 Sobic003G119000 Sobic003G280800--Sobic003G119000 Sobic001G474600 Sobic001G474600 Sobic003G280800--Sobic001G474600 Sobic007G117400 Sobic007G117400 Sobic003G280800--Sobic007G117400 Sobic003G280800--Sobic006G216800 Sobic003G372700 Sobic003G372700 Sobic003G280800--Sobic003G372700 Sobic003G052200 Sobic003G052200 Sobic009G126400--Sobic003G052200 Sobic009G040600 Sobic009G040600 Sobic009G126400--Sobic009G040600 Sobic009G126400--Sobic008G047800 Sobic009G126400--Sobic003G280800 Sobic001G222500 Sobic001G222500 Sobic009G126400--Sobic001G222500 Sobic008G162900 Sobic008G162900 Sobic009G126400--Sobic008G162900 Sobic007G096000 Sobic007G096000 Sobic009G126400--Sobic007G096000 Sobic004G208900 Sobic004G208900 Sobic009G126400--Sobic004G208900 Sobic009G126400--Sobic002G309600
Octagon: transcription factors


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