Gene annotation
Transcriptome id Sobic.001G002000.1
Synonym Sb01g000310
Functional annotation protein kinase domain containing protein, expressed
UniProt C5WRU5
Pfam PF00564 PF07714
Panther DB PTHR31066 PTHR31066:SF7
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G35050 : Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
RAP-DB (Rice) LOC_Os07g25680.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a041071
Brachypodium KQK11948
Barley HORVU5Hr1G125710.2 , HORVU5Hr1G125710.5 , HORVU5Hr1G125710.7 , HORVU5Hr1G125710.6 , HORVU5Hr1G125710.1 , HORVU5Hr1G125710.3 , HORVU5Hr1G125710.4 , HORVU5Hr1G125710.8
Wheat TraesCS7B02G003200 , TraesCS5B02G568400 , TraesCS5D02G560600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
2 Sobic.001G289800 BAH domain containing protein, putative, expressed -
3 Sobic.004G291900 ESP4, putative, expressed K06100: symplekin
4 Sobic.003G422500 expressed protein -
5 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
6 Sobic.010G010700 PHD-finger family protein, expressed -
7 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
8 Sobic.001G289600 BAH domain containing protein, putative, expressed -
9 Sobic.002G411600 CW-type Zinc Finger, putative, expressed -
10 Sobic.006G041600 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1
11 Sobic.009G191000 MATH domain containing protein, expressed -
12 Sobic.001G363500 DIRP family protein, putative, expressed -
13 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
14 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
15 Sobic.003G072200 zinc finger protein, putative, expressed K11978: E3 ubiquitin-protein ligase UBR3
16 Sobic.003G196300 DNA binding protein, putative, expressed -
17 Sobic.006G055200 RNA-binding motif protein, putative, expressed K13192: RNA-binding protein 26
18 Sobic.009G256400 ATP binding protein, putative, expressed K15192: BTAF1, TATA-binding protein-associated factor
19 Sobic.002G309600 DNA-binding protein, putative, expressed K14326: UPF1, regulator of nonsense transcripts 1
20 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4


Gene co-expression network
sample Sobic001G002000 Sobic001G002000 Sobic001G194200 Sobic001G194200 Sobic001G002000--Sobic001G194200 Sobic001G289800 Sobic001G289800 Sobic001G002000--Sobic001G289800 Sobic004G291900 Sobic004G291900 Sobic001G002000--Sobic004G291900 Sobic003G422500 Sobic003G422500 Sobic001G002000--Sobic003G422500 Sobic010G247800 Sobic010G247800 Sobic001G002000--Sobic010G247800 Sobic010G010700 Sobic010G010700 Sobic001G002000--Sobic010G010700 Sobic004G034900 Sobic004G034900 Sobic001G002000--Sobic004G034900 Sobic001G289600 Sobic001G289600 Sobic001G002000--Sobic001G289600 Sobic002G411600 Sobic002G411600 Sobic001G002000--Sobic002G411600 Sobic001G194200--Sobic004G291900 Sobic006G055200 Sobic006G055200 Sobic001G194200--Sobic006G055200 Sobic005G001000 Sobic005G001000 Sobic001G194200--Sobic005G001000 Sobic001G194200--Sobic010G010700 Sobic004G276400 Sobic004G276400 Sobic001G194200--Sobic004G276400 Sobic001G194200--Sobic001G289800 Sobic008G001200 Sobic008G001200 Sobic001G194200--Sobic008G001200 Sobic010G206900 Sobic010G206900 Sobic001G194200--Sobic010G206900 Sobic001G194200--Sobic004G034900 Sobic001G289800--Sobic001G289600 Sobic001G289800--Sobic003G422500 Sobic001G289800--Sobic001G194200 Sobic001G289800--Sobic004G291900 Sobic001G289800--Sobic004G034900 Sobic001G289800--Sobic001G002000 Sobic001G289800--Sobic010G010700 Sobic007G062800 Sobic007G062800 Sobic001G289800--Sobic007G062800 Sobic001G289800--Sobic005G001000 Sobic004G291900--Sobic001G194200 Sobic004G291900--Sobic001G289800 Sobic004G174200 Sobic004G174200 Sobic004G291900--Sobic004G174200 Sobic004G291900--Sobic004G276400 Sobic004G291900--Sobic005G001000 Sobic004G291900--Sobic004G034900 Sobic009G256400 Sobic009G256400 Sobic004G291900--Sobic009G256400 Sobic004G291900--Sobic001G002000 Sobic004G291900--Sobic010G010700 Sobic003G422500--Sobic002G411600 Sobic009G191000 Sobic009G191000 Sobic003G422500--Sobic009G191000 Sobic003G422500--Sobic001G289600 Sobic009G165700 Sobic009G165700 Sobic003G422500--Sobic009G165700 Sobic002G008900 Sobic002G008900 Sobic003G422500--Sobic002G008900 Sobic003G422500--Sobic004G034900 Sobic003G422500--Sobic001G289800 Sobic001G540400 Sobic001G540400 Sobic003G422500--Sobic001G540400 Sobic008G132600 Sobic008G132600 Sobic003G422500--Sobic008G132600 Sobic010G247800--Sobic010G206900 Sobic010G247800--Sobic009G165700 Sobic010G247800--Sobic002G411600 Sobic010G247800--Sobic003G422500 Sobic010G247800--Sobic009G191000 Sobic010G247800--Sobic001G002000 Sobic001G363500 Sobic001G363500 Sobic010G247800--Sobic001G363500 Sobic010G247800--Sobic004G291900 Sobic002G405800 Sobic002G405800 Sobic010G247800--Sobic002G405800 Sobic010G010700--Sobic010G206900 Sobic010G010700--Sobic004G034900 Sobic010G010700--Sobic004G276400 Sobic010G010700--Sobic001G194200 Sobic010G010700--Sobic007G062800 Sobic010G010700--Sobic002G008900 Sobic005G112300 Sobic005G112300 Sobic010G010700--Sobic005G112300 Sobic010G010700--Sobic008G001200 Sobic003G186000 Sobic003G186000 Sobic010G010700--Sobic003G186000 Sobic004G034900--Sobic001G289600 Sobic004G034900--Sobic010G206900 Sobic004G034900--Sobic010G010700 Sobic004G034900--Sobic002G411600 Sobic004G034900--Sobic001G540400 Sobic004G034900--Sobic003G422500 Sobic004G034900--Sobic004G276400 Sobic004G034900--Sobic002G008900 Sobic004G034900--Sobic007G062800 Sobic001G289600--Sobic001G540400 Sobic001G289600--Sobic004G034900 Sobic001G289600--Sobic001G289800 Sobic001G289600--Sobic003G422500 Sobic001G365900 Sobic001G365900 Sobic001G289600--Sobic001G365900 Sobic001G289600--Sobic009G191000 Sobic005G008800 Sobic005G008800 Sobic001G289600--Sobic005G008800 Sobic007G105100 Sobic007G105100 Sobic001G289600--Sobic007G105100 Sobic001G289600--Sobic010G010700 Sobic002G411600--Sobic009G191000 Sobic002G411600--Sobic003G422500 Sobic002G411600--Sobic010G206900 Sobic002G411600--Sobic002G008900 Sobic002G411600--Sobic004G034900 Sobic002G411600--Sobic004G174200 Sobic002G411600--Sobic010G247800 Sobic001G534700 Sobic001G534700 Sobic002G411600--Sobic001G534700 Sobic003G101400 Sobic003G101400 Sobic002G411600--Sobic003G101400
Octagon: transcription factors


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