Gene annotation
Transcriptome id Sobic.K042000.1
Synonym
Functional annotation non-lysosomal glucosylceramidase, putative, expressed
UniProt A0A1W0VQV1 , A0A120GUN3 , C6JS65 , C6JS66
Pfam PF12215 PF04685
Panther DB PTHR12654 PTHR12654:SF5
NCBI CDD -
KEGG Orthology K17108; non-lysosomal glucosylceramidase
Gene Ontology GO:0016021; integral component of membrane GO:0006665sphingolipid metabolic process GO:0004348glucosylceramidase activity


Orthologs (automatic annotation)
TAIR AT3G24180 : Beta-glucosidase, GBA2 type family protein
RAP-DB (Rice) LOC_Os10g33420.1 : non-lysosomal glucosylceramidase, putative, expressed
MaizeGDB (Corn) Zm00025a013567
Brachypodium KQK16457
Barley HORVU1Hr1G049550.29 , HORVU1Hr1G049550.23 , HORVU1Hr1G049550.22 , HORVU1Hr1G049550.18 , HORVU1Hr1G049550.19 , HORVU1Hr1G049550.10 , HORVU1Hr1G049550.11 , HORVU1Hr1G049550.12 , HORVU1Hr1G049550.13 , HORVU1Hr1G049550.14 , HORVU1Hr1G049550.15 , HORVU1Hr1G049550.16 , HORVU1Hr1G049550.17 , HORVU1Hr1G049550.28 , HORVU1Hr1G049550.25 , HORVU1Hr1G049550.24 , HORVU1Hr1G049550.27 , HORVU1Hr1G049550.26 , HORVU1Hr1G049550.21 , HORVU1Hr1G049550.20 , HORVU1Hr1G049550.8 , HORVU1Hr1G049550.9 , HORVU1Hr1G049550.2 , HORVU1Hr1G049550.3 , HORVU1Hr1G049550.1 , HORVU1Hr1G049550.6 , HORVU1Hr1G049550.7 , HORVU1Hr1G049550.4 , HORVU1Hr1G049550.5 , HORVU1Hr1G049550.32 , HORVU1Hr1G049550.33 , HORVU1Hr1G049550.30 , HORVU1Hr1G049550.31 , HORVU1Hr1G049550.36 , HORVU1Hr1G049550.37 , HORVU1Hr1G049550.34 , HORVU1Hr1G049550.35 , HORVU1Hr1G049550.38 , HORVU1Hr1G049550.39 , HORVU1Hr1G049550.40
Wheat TraesCS1D02G192800 , TraesCS1D02G192800 , TraesCS1D02G192800 , TraesCS1D02G192800 , TraesCS1D02G192800 , TraesCS1A02G183900 , TraesCS1A02G183900 , TraesCS1A02G183900 , TraesCS1B02G205400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
2 Sobic.006G216800 AAA family ATPase, putative, expressed K13339: PEX6, peroxin-6
3 Sobic.006G209850 - -
4 Sobic.002G053000 expressed protein -
5 Sobic.001G071400 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
6 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
7 Sobic.002G006900 tetratricopeptide repeat domain containing protein, expressed -
8 Sobic.002G133400 CTR1-like protein kinase, putative, expressed K14510: serine/threonine-protein kinase CTR1
9 Sobic.009G126400 glycine-rich protein, putative, expressed K14845: RAI1, RAT1-interacting protein
10 Sobic.002G134200 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
11 Sobic.007G167500 expressed protein -
12 Sobic.002G309600 DNA-binding protein, putative, expressed K14326: UPF1, regulator of nonsense transcripts 1
13 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
14 Sobic.001G413500 expressed protein -
15 Sobic.001G474600 calmodulin-binding transcription activator, putative, expressed -
16 Sobic.002G143500 sulfate transporter 4.1, chloroplast precursor, putative, expressed K18059: sulfate transporter 4
17 Sobic.010G153700 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
18 Sobic.008G024600 expressed protein -
19 Sobic.001G241200 protein kinase domain containing protein, expressed -
20 Sobic.007G126600 RNA recognition motif containing protein, putative, expressed K12822: RBM25, RNA-binding protein 25


Gene co-expression network
sample SobicK042000 SobicK042000 Sobic003G280800 Sobic003G280800 SobicK042000--Sobic003G280800 Sobic006G216800 Sobic006G216800 SobicK042000--Sobic006G216800 Sobic006G209850 Sobic006G209850 SobicK042000--Sobic006G209850 Sobic002G053000 Sobic002G053000 SobicK042000--Sobic002G053000 Sobic001G071400 Sobic001G071400 SobicK042000--Sobic001G071400 Sobic008G047800 Sobic008G047800 SobicK042000--Sobic008G047800 Sobic002G006900 Sobic002G006900 SobicK042000--Sobic002G006900 Sobic002G133400 Sobic002G133400 SobicK042000--Sobic002G133400 Sobic009G126400 Sobic009G126400 SobicK042000--Sobic009G126400 Sobic002G309600 Sobic002G309600 Sobic003G280800--Sobic002G309600 Sobic003G280800--Sobic001G071400 Sobic002G134200 Sobic002G134200 Sobic003G280800--Sobic002G134200 Sobic003G280800--Sobic006G209850 Sobic003G119000 Sobic003G119000 Sobic003G280800--Sobic003G119000 Sobic001G474600 Sobic001G474600 Sobic003G280800--Sobic001G474600 Sobic007G117400 Sobic007G117400 Sobic003G280800--Sobic007G117400 Sobic003G280800--Sobic006G216800 Sobic003G372700 Sobic003G372700 Sobic003G280800--Sobic003G372700 Sobic006G216800--Sobic002G133400 Sobic007G116200 Sobic007G116200 Sobic006G216800--Sobic007G116200 Sobic006G216800--Sobic002G309600 Sobic006G216800--Sobic002G134200 Sobic003G332800 Sobic003G332800 Sobic006G216800--Sobic003G332800 Sobic005G112300 Sobic005G112300 Sobic006G216800--Sobic005G112300 Sobic006G216800--Sobic003G280800 Sobic010G139000 Sobic010G139000 Sobic006G216800--Sobic010G139000 Sobic010G277500 Sobic010G277500 Sobic006G216800--Sobic010G277500 Sobic006G128900 Sobic006G128900 Sobic006G209850--Sobic006G128900 Sobic001G511500 Sobic001G511500 Sobic006G209850--Sobic001G511500 Sobic006G209850--Sobic003G280800 Sobic006G209850--Sobic010G277500 Sobic008G024600 Sobic008G024600 Sobic006G209850--Sobic008G024600 Sobic006G209850--Sobic002G053000 Sobic010G129200 Sobic010G129200 Sobic006G209850--Sobic010G129200 Sobic004G145500 Sobic004G145500 Sobic006G209850--Sobic004G145500 Sobic002G243900 Sobic002G243900 Sobic006G209850--Sobic002G243900 Sobic002G053000--Sobic008G024600 Sobic002G053000--Sobic003G280800 Sobic002G053000--Sobic006G209850 Sobic002G053000--Sobic006G128900 Sobic009G210500 Sobic009G210500 Sobic002G053000--Sobic009G210500 Sobic002G053000--Sobic010G129200 Sobic003G445400 Sobic003G445400 Sobic002G053000--Sobic003G445400 Sobic007G167500 Sobic007G167500 Sobic002G053000--Sobic007G167500 Sobic005G045300 Sobic005G045300 Sobic002G053000--Sobic005G045300 Sobic001G071400--Sobic002G134200 Sobic001G071400--Sobic002G309600 Sobic001G071400--Sobic003G280800 Sobic001G071400--Sobic008G047800 Sobic009G191000 Sobic009G191000 Sobic001G071400--Sobic009G191000 Sobic001G219600 Sobic001G219600 Sobic001G071400--Sobic001G219600 Sobic001G071400--Sobic005G112300 Sobic002G315200 Sobic002G315200 Sobic001G071400--Sobic002G315200 Sobic002G008900 Sobic002G008900 Sobic001G071400--Sobic002G008900 Sobic008G047800--Sobic002G006900 Sobic004G084300 Sobic004G084300 Sobic008G047800--Sobic004G084300 Sobic001G512700 Sobic001G512700 Sobic008G047800--Sobic001G512700 Sobic001G155000 Sobic001G155000 Sobic008G047800--Sobic001G155000 Sobic009G040600 Sobic009G040600 Sobic008G047800--Sobic009G040600 Sobic007G011300 Sobic007G011300 Sobic008G047800--Sobic007G011300 Sobic007G217000 Sobic007G217000 Sobic008G047800--Sobic007G217000 Sobic004G274200 Sobic004G274200 Sobic008G047800--Sobic004G274200 Sobic008G047800--Sobic002G309600 Sobic002G006900--Sobic008G047800 Sobic007G065400 Sobic007G065400 Sobic002G006900--Sobic007G065400 Sobic003G200200 Sobic003G200200 Sobic002G006900--Sobic003G200200 Sobic002G006900--Sobic003G372700 Sobic002G006900--Sobic009G040600 Sobic002G006900--Sobic001G155000 Sobic002G006900--Sobic002G309600 Sobic001G214300 Sobic001G214300 Sobic002G006900--Sobic001G214300 Sobic002G006900--Sobic001G512700 Sobic002G133400--Sobic006G216800 Sobic002G133400--Sobic002G134200 Sobic002G133400--Sobic002G006900 Sobic002G133400--Sobic008G047800 Sobic002G133400--Sobic007G065400 Sobic002G133400--Sobic002G309600 Sobic002G133400--Sobic010G139000 Sobic001G036050 Sobic001G036050 Sobic002G133400--Sobic001G036050 Sobic006G048500 Sobic006G048500 Sobic002G133400--Sobic006G048500 Sobic003G052200 Sobic003G052200 Sobic009G126400--Sobic003G052200 Sobic009G126400--Sobic009G040600 Sobic009G126400--Sobic008G047800 Sobic009G126400--Sobic003G280800 Sobic001G222500 Sobic001G222500 Sobic009G126400--Sobic001G222500 Sobic008G162900 Sobic008G162900 Sobic009G126400--Sobic008G162900 Sobic007G096000 Sobic007G096000 Sobic009G126400--Sobic007G096000 Sobic004G208900 Sobic004G208900 Sobic009G126400--Sobic004G208900 Sobic009G126400--Sobic002G309600
Octagon: transcription factors


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