Gene annotation
Transcriptome id Sobic.009G245800.1,Sobic.009G245800.2
Synonym Sb09g029670
Functional annotation protein of unknown function DUF1296 domain containing protein, expressed
UniProt C5YWG1 , A0A1B6PAB5
Pfam PF06972
Panther DB PTHR12758 PTHR12758:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G29350 : Kinase-related protein of unknown function (DUF1296)
RAP-DB (Rice) LOC_Os05g50480.1 : protein of unknown function DUF1296 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a017557 , Zm00025a036704 , Zm00025a044716 , Zm00025a056202
Brachypodium KQK04686 , KQK04685
Barley HORVU1Hr1G091730.3 , HORVU1Hr1G091730.2 , HORVU1Hr1G091730.1 , HORVU1Hr1G091730.7 , HORVU1Hr1G091730.6 , HORVU1Hr1G091730.5 , HORVU1Hr1G091730.4 , HORVU1Hr1G091730.9 , HORVU1Hr1G091730.8 , HORVU1Hr1G091730.13 , HORVU1Hr1G091730.12 , HORVU1Hr1G091730.11 , HORVU1Hr1G091730.10 , HORVU1Hr1G091730.17 , HORVU1Hr1G091730.16 , HORVU1Hr1G091730.15 , HORVU1Hr1G091730.14 , HORVU1Hr1G091730.19 , HORVU1Hr1G091730.18 , HORVU1Hr1G091730.22 , HORVU1Hr1G091730.20 , HORVU1Hr1G091730.21
Wheat TraesCS1D02G428100 , TraesCS1D02G428100 , TraesCS1B02G450700 , TraesCS1B02G450700 , TraesCS1A02G420300 , TraesCS1A02G420300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G053800 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
2 Sobic.003G404500 dynamin family protein, putative, expressed K17065: dynamin 1-like protein
3 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
4 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
5 Sobic.006G208500 proteasome/cyclosome repeat containing protein, expressed K03032: PSMD1, 26S proteasome regulatory subunit N2
6 Sobic.006G195700 WD domain, G-beta repeat domain containing protein, expressed K14962: WDR82, SWD2, COMPASS component SWD2
7 Sobic.002G310200 expressed protein -
8 Sobic.004G135400 expressed protein -
9 Sobic.003G443100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
10 Sobic.010G116600 FHA domain containing protein, putative, expressed -
11 Sobic.001G155000 DNA-directed RNA polymerase II subunit RPB2, putative, expressed K03010: RPB2, DNA-directed RNA polymerase II subunit RPB2
12 Sobic.007G217000 tetratricopeptide repeat domain containing protein, expressed K13342: PEX5, peroxin-5
13 Sobic.006G012500 protein transport protein Sec24-like, putative, expressed K14007: protein transport protein SEC24
14 Sobic.010G275500 EF hand family protein, putative, expressed -
15 Sobic.001G002000 protein kinase domain containing protein, expressed -
16 Sobic.001G222500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
17 Sobic.009G084900 expressed protein -
18 Sobic.001G114000 expressed protein -
19 Sobic.004G178200 ligatin, putative, expressed K15027: translation initiation factor 2D
20 Sobic.001G347500 expressed protein -


Gene co-expression network
sample Sobic009G245800 Sobic009G245800 Sobic010G053800 Sobic010G053800 Sobic009G245800--Sobic010G053800 Sobic003G404500 Sobic003G404500 Sobic009G245800--Sobic003G404500 Sobic004G072100 Sobic004G072100 Sobic009G245800--Sobic004G072100 Sobic008G047800 Sobic008G047800 Sobic009G245800--Sobic008G047800 Sobic006G208500 Sobic006G208500 Sobic009G245800--Sobic006G208500 Sobic006G195700 Sobic006G195700 Sobic009G245800--Sobic006G195700 Sobic002G310200 Sobic002G310200 Sobic009G245800--Sobic002G310200 Sobic004G135400 Sobic004G135400 Sobic009G245800--Sobic004G135400 Sobic003G443100 Sobic003G443100 Sobic009G245800--Sobic003G443100 Sobic006G012500 Sobic006G012500 Sobic010G053800--Sobic006G012500 Sobic010G275500 Sobic010G275500 Sobic010G053800--Sobic010G275500 Sobic010G053800--Sobic004G072100 Sobic001G155000 Sobic001G155000 Sobic010G053800--Sobic001G155000 Sobic003G187500 Sobic003G187500 Sobic010G053800--Sobic003G187500 Sobic010G053800--Sobic008G047800 Sobic010G116600 Sobic010G116600 Sobic010G053800--Sobic010G116600 Sobic006G163800 Sobic006G163800 Sobic010G053800--Sobic006G163800 Sobic004G039600 Sobic004G039600 Sobic010G053800--Sobic004G039600 Sobic001G451400 Sobic001G451400 Sobic003G404500--Sobic001G451400 Sobic001G441400 Sobic001G441400 Sobic003G404500--Sobic001G441400 Sobic003G404500--Sobic009G245800 Sobic001G363500 Sobic001G363500 Sobic003G404500--Sobic001G363500 Sobic003G404500--Sobic010G116600 Sobic007G218000 Sobic007G218000 Sobic003G404500--Sobic007G218000 Sobic003G404500--Sobic004G072100 Sobic009G044800 Sobic009G044800 Sobic003G404500--Sobic009G044800 Sobic003G404500--Sobic010G053800 Sobic004G072100--Sobic007G218000 Sobic004G072100--Sobic010G053800 Sobic004G072100--Sobic010G275500 Sobic007G132100 Sobic007G132100 Sobic004G072100--Sobic007G132100 Sobic004G072100--Sobic006G012500 Sobic010G069100 Sobic010G069100 Sobic004G072100--Sobic010G069100 Sobic004G072100--Sobic010G116600 Sobic004G072100--Sobic008G047800 Sobic004G072100--Sobic001G155000 Sobic002G006900 Sobic002G006900 Sobic008G047800--Sobic002G006900 Sobic004G084300 Sobic004G084300 Sobic008G047800--Sobic004G084300 Sobic001G512700 Sobic001G512700 Sobic008G047800--Sobic001G512700 Sobic008G047800--Sobic001G155000 Sobic009G040600 Sobic009G040600 Sobic008G047800--Sobic009G040600 Sobic007G011300 Sobic007G011300 Sobic008G047800--Sobic007G011300 Sobic007G217000 Sobic007G217000 Sobic008G047800--Sobic007G217000 Sobic004G274200 Sobic004G274200 Sobic008G047800--Sobic004G274200 Sobic002G309600 Sobic002G309600 Sobic008G047800--Sobic002G309600 Sobic006G208500--Sobic004G135400 Sobic003G006400 Sobic003G006400 Sobic006G208500--Sobic003G006400 Sobic006G136400 Sobic006G136400 Sobic006G208500--Sobic006G136400 Sobic006G208500--Sobic009G245800 Sobic006G126100 Sobic006G126100 Sobic006G208500--Sobic006G126100 Sobic006G208500--Sobic004G039600 Sobic006G200700 Sobic006G200700 Sobic006G208500--Sobic006G200700 Sobic001G369000 Sobic001G369000 Sobic006G208500--Sobic001G369000 Sobic004G277200 Sobic004G277200 Sobic006G208500--Sobic004G277200 Sobic010G204400 Sobic010G204400 Sobic006G195700--Sobic010G204400 Sobic006G195700--Sobic009G245800 Sobic010G236400 Sobic010G236400 Sobic006G195700--Sobic010G236400 Sobic002G056701 Sobic002G056701 Sobic006G195700--Sobic002G056701 Sobic006G195700--Sobic002G310200 Sobic002G260400 Sobic002G260400 Sobic006G195700--Sobic002G260400 Sobic010G245000 Sobic010G245000 Sobic006G195700--Sobic010G245000 Sobic006G173100 Sobic006G173100 Sobic006G195700--Sobic006G173100 Sobic006G195700--Sobic003G187500 Sobic001G222500 Sobic001G222500 Sobic002G310200--Sobic001G222500 Sobic002G310200--Sobic008G047800 Sobic002G310200--Sobic007G217000 Sobic002G310200--Sobic004G084300 Sobic007G096000 Sobic007G096000 Sobic002G310200--Sobic007G096000 Sobic010G101800 Sobic010G101800 Sobic002G310200--Sobic010G101800 Sobic002G310200--Sobic003G443100 Sobic008G067600 Sobic008G067600 Sobic002G310200--Sobic008G067600 Sobic004G067700 Sobic004G067700 Sobic002G310200--Sobic004G067700 Sobic001G534800 Sobic001G534800 Sobic004G135400--Sobic001G534800 Sobic004G135400--Sobic006G208500 Sobic008G099800 Sobic008G099800 Sobic004G135400--Sobic008G099800 Sobic004G135400--Sobic004G277200 Sobic005G003300 Sobic005G003300 Sobic004G135400--Sobic005G003300 Sobic008G004600 Sobic008G004600 Sobic004G135400--Sobic008G004600 Sobic004G135400--Sobic006G126100 Sobic002G042600 Sobic002G042600 Sobic004G135400--Sobic002G042600 Sobic004G135400--Sobic009G245800 Sobic003G443100--Sobic002G310200 Sobic003G184699 Sobic003G184699 Sobic003G443100--Sobic003G184699 Sobic003G443100--Sobic008G047800 Sobic003G443100--Sobic001G441400 Sobic003G443100--Sobic009G245800 Sobic005G027400 Sobic005G027400 Sobic003G443100--Sobic005G027400 Sobic003G141500 Sobic003G141500 Sobic003G443100--Sobic003G141500 Sobic003G443100--Sobic001G363500 Sobic003G443100--Sobic010G053800
Octagon: transcription factors


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