Gene annotation
Transcriptome id Sobic.003G404500.1
Synonym Sb03g044010, ADL2, DRP3A
Functional annotation dynamin family protein, putative, expressed
UniProt C5XGA4
Pfam PF01926 PF02212 PF01031
Panther DB PTHR11566 PTHR11566:SF75
NCBI CDD -
KEGG Orthology K17065; dynamin 1-like protein
Gene Ontology GO:0005525; GTP binding GO:0003924GTPase activity


Orthologs (automatic annotation)
TAIR AT4G33650 : dynamin-related protein 3A
RAP-DB (Rice) LOC_Os01g69130.1 : dynamin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a039299 , Zm00025a026267
Brachypodium KQK11242 , PNT73477
Barley HORVU3Hr1G094260.10 , HORVU3Hr1G094260.11 , HORVU3Hr1G094260.8 , HORVU3Hr1G094260.9 , HORVU3Hr1G094260.1 , HORVU3Hr1G094260.2 , HORVU3Hr1G094260.3 , HORVU3Hr1G094260.4 , HORVU3Hr1G094260.5 , HORVU3Hr1G094260.6 , HORVU3Hr1G094260.7
Wheat TraesCS5D02G082000 , TraesCS5D02G082000 , TraesCS5D02G082000 , TraesCS3A02G428000 , TraesCS5D02G082000 , TraesCS3A02G428000 , TraesCS3D02G423500 , TraesCS3D02G423500 , TraesCS3D02G423500 , TraesCS3A02G428000 , TraesCS5D02G082000 , TraesCS3B02G465100 , TraesCS3B02G465100 , TraesCS3B02G465100
Populus -


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cDNA sequences
Sobic.003G404500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G451400 HEAT repeat family protein, putative, expressed K15305: VAC14, vacuole morphology and inheritance protein 14
2 Sobic.001G441400 transcription factor, putative, expressed K09060: plant G-box-binding factor
3 Sobic.009G245800 protein of unknown function DUF1296 domain containing protein, expressed -
4 Sobic.001G363500 DIRP family protein, putative, expressed -
5 Sobic.010G116600 FHA domain containing protein, putative, expressed -
6 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
7 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
8 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
9 Sobic.010G053800 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
10 Sobic.006G163800 diacylglycerol kinase, putative, expressed -
11 Sobic.006G252900 ubiquitin family protein, putative, expressed -
12 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
13 Sobic.002G299700 ATGRIP/GRIP, putative, expressed -
14 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
15 Sobic.007G132100 myrosinase precursor, putative, expressed -
16 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
17 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
18 Sobic.010G275500 EF hand family protein, putative, expressed -
19 Sobic.001G114000 expressed protein -
20 Sobic.003G444800 expressed protein -


Gene co-expression network
sample Sobic003G404500 Sobic003G404500 Sobic001G451400 Sobic001G451400 Sobic003G404500--Sobic001G451400 Sobic001G441400 Sobic001G441400 Sobic003G404500--Sobic001G441400 Sobic009G245800 Sobic009G245800 Sobic003G404500--Sobic009G245800 Sobic001G363500 Sobic001G363500 Sobic003G404500--Sobic001G363500 Sobic010G116600 Sobic010G116600 Sobic003G404500--Sobic010G116600 Sobic007G218000 Sobic007G218000 Sobic003G404500--Sobic007G218000 Sobic004G072100 Sobic004G072100 Sobic003G404500--Sobic004G072100 Sobic009G044800 Sobic009G044800 Sobic003G404500--Sobic009G044800 Sobic010G053800 Sobic010G053800 Sobic003G404500--Sobic010G053800 Sobic007G008900 Sobic007G008900 Sobic001G451400--Sobic007G008900 Sobic009G165700 Sobic009G165700 Sobic001G451400--Sobic009G165700 Sobic001G451400--Sobic001G441400 Sobic001G389100 Sobic001G389100 Sobic001G451400--Sobic001G389100 Sobic010G247800 Sobic010G247800 Sobic001G451400--Sobic010G247800 Sobic001G451400--Sobic003G404500 Sobic010G226000 Sobic010G226000 Sobic001G451400--Sobic010G226000 Sobic005G027400 Sobic005G027400 Sobic001G451400--Sobic005G027400 Sobic003G422500 Sobic003G422500 Sobic001G451400--Sobic003G422500 Sobic001G441400--Sobic001G451400 Sobic001G441400--Sobic003G404500 Sobic006G252900 Sobic006G252900 Sobic001G441400--Sobic006G252900 Sobic001G441400--Sobic005G027400 Sobic001G441400--Sobic009G165700 Sobic001G441400--Sobic001G363500 Sobic003G102400 Sobic003G102400 Sobic001G441400--Sobic003G102400 Sobic002G299700 Sobic002G299700 Sobic001G441400--Sobic002G299700 Sobic004G351100 Sobic004G351100 Sobic001G441400--Sobic004G351100 Sobic009G245800--Sobic010G053800 Sobic009G245800--Sobic003G404500 Sobic009G245800--Sobic004G072100 Sobic008G047800 Sobic008G047800 Sobic009G245800--Sobic008G047800 Sobic006G208500 Sobic006G208500 Sobic009G245800--Sobic006G208500 Sobic006G195700 Sobic006G195700 Sobic009G245800--Sobic006G195700 Sobic002G310200 Sobic002G310200 Sobic009G245800--Sobic002G310200 Sobic004G135400 Sobic004G135400 Sobic009G245800--Sobic004G135400 Sobic003G443100 Sobic003G443100 Sobic009G245800--Sobic003G443100 Sobic005G112300 Sobic005G112300 Sobic001G363500--Sobic005G112300 Sobic007G062800 Sobic007G062800 Sobic001G363500--Sobic007G062800 Sobic001G363500--Sobic010G247800 Sobic001G363500--Sobic002G299700 Sobic010G112100 Sobic010G112100 Sobic001G363500--Sobic010G112100 Sobic004G242400 Sobic004G242400 Sobic001G363500--Sobic004G242400 Sobic001G433800 Sobic001G433800 Sobic001G363500--Sobic001G433800 Sobic010G279450 Sobic010G279450 Sobic001G363500--Sobic010G279450 Sobic010G139000 Sobic010G139000 Sobic001G363500--Sobic010G139000 Sobic002G071500 Sobic002G071500 Sobic010G116600--Sobic002G071500 Sobic010G116600--Sobic002G299700 Sobic003G093800 Sobic003G093800 Sobic010G116600--Sobic003G093800 Sobic010G116600--Sobic009G044800 Sobic010G116600--Sobic004G072100 Sobic010G236400 Sobic010G236400 Sobic010G116600--Sobic010G236400 Sobic010G275500 Sobic010G275500 Sobic010G116600--Sobic010G275500 Sobic003G408600 Sobic003G408600 Sobic010G116600--Sobic003G408600 Sobic010G116600--Sobic010G053800 Sobic007G132100 Sobic007G132100 Sobic007G218000--Sobic007G132100 Sobic007G218000--Sobic004G072100 Sobic002G112700 Sobic002G112700 Sobic007G218000--Sobic002G112700 Sobic006G131000 Sobic006G131000 Sobic007G218000--Sobic006G131000 Sobic007G218000--Sobic009G044800 Sobic010G204400 Sobic010G204400 Sobic007G218000--Sobic010G204400 Sobic006G012500 Sobic006G012500 Sobic007G218000--Sobic006G012500 Sobic009G249700 Sobic009G249700 Sobic007G218000--Sobic009G249700 Sobic009G092400 Sobic009G092400 Sobic007G218000--Sobic009G092400 Sobic004G072100--Sobic007G218000 Sobic004G072100--Sobic010G053800 Sobic004G072100--Sobic010G275500 Sobic004G072100--Sobic007G132100 Sobic004G072100--Sobic006G012500 Sobic010G069100 Sobic010G069100 Sobic004G072100--Sobic010G069100 Sobic004G072100--Sobic010G116600 Sobic004G072100--Sobic008G047800 Sobic001G155000 Sobic001G155000 Sobic004G072100--Sobic001G155000 Sobic003G360400 Sobic003G360400 Sobic009G044800--Sobic003G360400 Sobic003G352200 Sobic003G352200 Sobic009G044800--Sobic003G352200 Sobic001G227400 Sobic001G227400 Sobic009G044800--Sobic001G227400 Sobic002G045600 Sobic002G045600 Sobic009G044800--Sobic002G045600 Sobic009G044800--Sobic010G116600 Sobic009G044800--Sobic007G218000 Sobic001G025000 Sobic001G025000 Sobic009G044800--Sobic001G025000 Sobic009G044800--Sobic001G433800 Sobic007G183900 Sobic007G183900 Sobic009G044800--Sobic007G183900 Sobic010G053800--Sobic006G012500 Sobic010G053800--Sobic010G275500 Sobic010G053800--Sobic004G072100 Sobic010G053800--Sobic001G155000 Sobic003G187500 Sobic003G187500 Sobic010G053800--Sobic003G187500 Sobic010G053800--Sobic008G047800 Sobic010G053800--Sobic010G116600 Sobic006G163800 Sobic006G163800 Sobic010G053800--Sobic006G163800 Sobic004G039600 Sobic004G039600 Sobic010G053800--Sobic004G039600
Octagon: transcription factors


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