Gene annotation
Transcriptome id Sobic.010G000600.1
Synonym Sb10g000240
Functional annotation BBF1 - 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains with a F5/8 type C discoidin domain, expressed
UniProt C5Z217
Pfam PF07707 PF00754 PF12248 PF00651
Panther DB PTHR24413 PTHR24413:SF79
NCBI CDD KOG4276; Predicted hormone receptor interactor
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G30600 : BTB/POZ domain-containing protein
RAP-DB (Rice) LOC_Os05g27880.2 : BBF1 - 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains with a F5/8 type C discoidin domain, expressed
MaizeGDB (Corn) Zm00025a050355
Brachypodium KQK20099
Barley HORVU3Hr1G105240.18 , HORVU3Hr1G105240.13 , HORVU3Hr1G105240.12 , HORVU3Hr1G105240.11 , HORVU3Hr1G105240.10 , HORVU3Hr1G105240.17 , HORVU3Hr1G105240.16 , HORVU3Hr1G105240.15 , HORVU3Hr1G105240.14 , HORVU3Hr1G105240.9 , HORVU3Hr1G105240.8 , HORVU3Hr1G105240.3 , HORVU3Hr1G105240.2 , HORVU3Hr1G105240.1 , HORVU3Hr1G105240.7 , HORVU3Hr1G105240.6 , HORVU3Hr1G105240.5 , HORVU3Hr1G105240.4
Wheat TraesCS3D02G475400 , TraesCS3D02G475400 , TraesCS3B02G525700 , TraesCS3A02G480600
Populus -


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cDNA sequences
Sobic.010G000600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G131040 - K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
2 Sobic.007G110200 wound responsive protein, putative, expressed -
3 Sobic.006G153900 transporter, major facilitator family, putative, expressed -
4 Sobic.001G300100 - -
5 Sobic.009G193500 AGAP007115-PA, putative, expressed -
6 Sobic.004G210900 auxin efflux carrier component, putative, expressed -
7 Sobic.003G381200 KH domain containing protein, putative, expressed K14945: protein quaking
8 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
9 Sobic.002G181300 expressed protein -
10 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
11 Sobic.006G030400 xa21, putative, expressed -
12 Sobic.002G159700 - -
13 Sobic.002G339300 myosin-Vb, putative, expressed K10357: myosin V
14 Sobic.010G258300 integral membrane protein, putative, expressed -
15 Sobic.001G146800 expressed protein -
16 Sobic.007G065100 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
17 Sobic.010G175500 expressed protein -
18 Sobic.007G029500 expressed protein -
19 Sobic.002G425700 ribonucleases P/MRP protein subunit POP1 containing protein, expressed K01164: ribonuclease P/MRP protein subunit POP1
20 Sobic.010G112000 expressed protein K17906: autophagy-related protein 2


Gene co-expression network
sample Sobic010G000600 Sobic010G000600 Sobic004G131040 Sobic004G131040 Sobic010G000600--Sobic004G131040 Sobic007G110200 Sobic007G110200 Sobic010G000600--Sobic007G110200 Sobic006G153900 Sobic006G153900 Sobic010G000600--Sobic006G153900 Sobic001G300100 Sobic001G300100 Sobic010G000600--Sobic001G300100 Sobic009G193500 Sobic009G193500 Sobic010G000600--Sobic009G193500 Sobic004G210900 Sobic004G210900 Sobic010G000600--Sobic004G210900 Sobic003G381200 Sobic003G381200 Sobic010G000600--Sobic003G381200 Sobic002G276100 Sobic002G276100 Sobic010G000600--Sobic002G276100 Sobic002G181300 Sobic002G181300 Sobic010G000600--Sobic002G181300 Sobic004G131040--Sobic010G000600 Sobic004G265800 Sobic004G265800 Sobic004G131040--Sobic004G265800 Sobic004G131040--Sobic002G181300 Sobic001G146800 Sobic001G146800 Sobic004G131040--Sobic001G146800 Sobic002G315800 Sobic002G315800 Sobic004G131040--Sobic002G315800 Sobic006G030600 Sobic006G030600 Sobic004G131040--Sobic006G030600 Sobic007G004500 Sobic007G004500 Sobic004G131040--Sobic007G004500 Sobic002G193100 Sobic002G193100 Sobic004G131040--Sobic002G193100 Sobic003G110000 Sobic003G110000 Sobic004G131040--Sobic003G110000 Sobic010G258300 Sobic010G258300 Sobic007G110200--Sobic010G258300 Sobic008G073900 Sobic008G073900 Sobic007G110200--Sobic008G073900 Sobic007G110200--Sobic010G000600 Sobic007G205600 Sobic007G205600 Sobic007G110200--Sobic007G205600 Sobic003G222300 Sobic003G222300 Sobic007G110200--Sobic003G222300 Sobic001G031300 Sobic001G031300 Sobic007G110200--Sobic001G031300 Sobic003G222600 Sobic003G222600 Sobic007G110200--Sobic003G222600 Sobic009G154600 Sobic009G154600 Sobic007G110200--Sobic009G154600 Sobic006G220600 Sobic006G220600 Sobic007G110200--Sobic006G220600 Sobic001G498600 Sobic001G498600 Sobic006G153900--Sobic001G498600 Sobic007G065100 Sobic007G065100 Sobic006G153900--Sobic007G065100 Sobic002G425700 Sobic002G425700 Sobic006G153900--Sobic002G425700 Sobic001G178700 Sobic001G178700 Sobic006G153900--Sobic001G178700 Sobic010G112000 Sobic010G112000 Sobic006G153900--Sobic010G112000 Sobic006G131500 Sobic006G131500 Sobic006G153900--Sobic006G131500 Sobic001G291000 Sobic001G291000 Sobic006G153900--Sobic001G291000 Sobic006G153900--Sobic010G000600 Sobic001G384900 Sobic001G384900 Sobic006G153900--Sobic001G384900 Sobic008G172300 Sobic008G172300 Sobic001G300100--Sobic008G172300 Sobic007G110700 Sobic007G110700 Sobic001G300100--Sobic007G110700 Sobic010G100800 Sobic010G100800 Sobic001G300100--Sobic010G100800 Sobic002G339300 Sobic002G339300 Sobic001G300100--Sobic002G339300 Sobic002G404200 Sobic002G404200 Sobic001G300100--Sobic002G404200 Sobic001G300100--Sobic009G193500 Sobic010G086900 Sobic010G086900 Sobic001G300100--Sobic010G086900 Sobic001G261900 Sobic001G261900 Sobic001G300100--Sobic001G261900 Sobic004G262700 Sobic004G262700 Sobic001G300100--Sobic004G262700 Sobic004G026500 Sobic004G026500 Sobic009G193500--Sobic004G026500 Sobic009G193500--Sobic002G339300 Sobic009G193500--Sobic002G276100 Sobic001G124100 Sobic001G124100 Sobic009G193500--Sobic001G124100 Sobic007G103100 Sobic007G103100 Sobic009G193500--Sobic007G103100 Sobic002G168500 Sobic002G168500 Sobic009G193500--Sobic002G168500 Sobic009G193500--Sobic008G172300 Sobic001G219700 Sobic001G219700 Sobic009G193500--Sobic001G219700 Sobic006G186600 Sobic006G186600 Sobic009G193500--Sobic006G186600 Sobic004G183800 Sobic004G183800 Sobic004G210900--Sobic004G183800 Sobic005G175500 Sobic005G175500 Sobic004G210900--Sobic005G175500 Sobic004G210900--Sobic010G000600 Sobic006G060601 Sobic006G060601 Sobic004G210900--Sobic006G060601 Sobic010G030300 Sobic010G030300 Sobic004G210900--Sobic010G030300 Sobic008G146900 Sobic008G146900 Sobic004G210900--Sobic008G146900 Sobic009G213800 Sobic009G213800 Sobic004G210900--Sobic009G213800 Sobic004G181700 Sobic004G181700 Sobic004G210900--Sobic004G181700 Sobic003G014300 Sobic003G014300 Sobic004G210900--Sobic003G014300 Sobic001G090500 Sobic001G090500 Sobic003G381200--Sobic001G090500 Sobic001G159400 Sobic001G159400 Sobic003G381200--Sobic001G159400 Sobic003G381200--Sobic002G276100 Sobic002G168300 Sobic002G168300 Sobic003G381200--Sobic002G168300 Sobic001G102500 Sobic001G102500 Sobic003G381200--Sobic001G102500 Sobic003G381200--Sobic007G065100 Sobic003G381200--Sobic008G172300 Sobic003G138500 Sobic003G138500 Sobic003G381200--Sobic003G138500 Sobic003G381200--Sobic004G026500 Sobic002G276100--Sobic003G381200 Sobic002G276100--Sobic004G026500 Sobic002G276100--Sobic004G181700 Sobic002G276100--Sobic001G159400 Sobic010G138000 Sobic010G138000 Sobic002G276100--Sobic010G138000 Sobic002G276100--Sobic002G168500 Sobic002G276100--Sobic009G193500 Sobic002G276100--Sobic008G172300 Sobic001G268200 Sobic001G268200 Sobic002G276100--Sobic001G268200 Sobic002G181300--Sobic007G065100 Sobic004G317100 Sobic004G317100 Sobic002G181300--Sobic004G317100 Sobic002G181300--Sobic004G131040 Sobic002G181300--Sobic004G181700 Sobic002G181300--Sobic002G425700 Sobic002G181300--Sobic002G276100 Sobic002G181300--Sobic010G000600 Sobic002G181300--Sobic001G498600 Sobic005G044400 Sobic005G044400 Sobic002G181300--Sobic005G044400
Octagon: transcription factors


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