Gene annotation
Transcriptome id Sobic.007G110200.2,Sobic.007G110200.5,Sobic.007G110200.7,Sobic.007G110200.4,Sobic.007G110200.8,Sobic.007G110200.3,Sobic.007G110200.6
Synonym Sb07g015480
Functional annotation wound responsive protein, putative, expressed
UniProt A0A1B6PH39
Pfam PF02577
Panther DB PTHR15160 PTHR15160:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004518; nuclease activity


Orthologs (automatic annotation)
TAIR AT1G19660 : Wound-responsive family protein
RAP-DB (Rice) LOC_Os08g26870.3,LOC_Os08g26870.2 : wound responsive protein, putative, expressed
MaizeGDB (Corn) Zm00025a030671 , Zm00025a004059
Brachypodium KQJ96269 , KQJ96268 , KQJ96272 , KQJ96273 , KQJ96270 , KQJ96271 , KQJ96274
Barley HORVU7Hr1G065420.8 , HORVU7Hr1G065420.9 , HORVU7Hr1G065420.2 , HORVU7Hr1G065420.3 , HORVU7Hr1G065420.1 , HORVU7Hr1G065420.6 , HORVU7Hr1G065420.7 , HORVU7Hr1G065420.4 , HORVU7Hr1G065420.10 , HORVU7Hr1G065420.11 , HORVU7Hr1G065420.12 , HORVU7Hr1G065420.13 , HORVU7Hr1G065420.14
Wheat TraesCS7A02G293600 , TraesCS7A02G293600 , TraesCS7D02G288900
Populus -


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cDNA sequences
Sobic.007G110200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G258300 integral membrane protein, putative, expressed -
2 Sobic.008G073900 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
3 Sobic.010G000600 BBF1 - 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains with a F5/8 type C discoidin domain, expressed -
4 Sobic.007G205600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase
5 Sobic.003G222300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.001G031300 PPR repeat domain containing protein, putative, expressed -
7 Sobic.003G222600 similar to DEAD-box ATP-dependent RNA helicase 25(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
8 Sobic.009G154600 glycosyl hydrolases family 17, putative, expressed -
9 Sobic.006G220600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
10 Sobic.010G113000 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
11 Sobic.001G423100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein K09562: HSPBP1, hsp70-interacting protein
12 Sobic.006G153900 transporter, major facilitator family, putative, expressed -
13 Sobic.003G381200 KH domain containing protein, putative, expressed K14945: protein quaking
14 Sobic.001G384900 hypothetical protein K09250: cellular nucleic acid-binding protein
15 Sobic.001G090500 YT521-B-like family domain containing protein, expressed -
16 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
17 Sobic.002G125900 ORM1, putative, expressed -
18 Sobic.004G147200 - -
19 Sobic.008G148400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein DSP1, putative, expressed -
20 Sobic.007G065100 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2


Gene co-expression network
sample Sobic007G110200 Sobic007G110200 Sobic010G258300 Sobic010G258300 Sobic007G110200--Sobic010G258300 Sobic008G073900 Sobic008G073900 Sobic007G110200--Sobic008G073900 Sobic010G000600 Sobic010G000600 Sobic007G110200--Sobic010G000600 Sobic007G205600 Sobic007G205600 Sobic007G110200--Sobic007G205600 Sobic003G222300 Sobic003G222300 Sobic007G110200--Sobic003G222300 Sobic001G031300 Sobic001G031300 Sobic007G110200--Sobic001G031300 Sobic003G222600 Sobic003G222600 Sobic007G110200--Sobic003G222600 Sobic009G154600 Sobic009G154600 Sobic007G110200--Sobic009G154600 Sobic006G220600 Sobic006G220600 Sobic007G110200--Sobic006G220600 Sobic010G258300--Sobic003G222300 Sobic010G258300--Sobic007G110200 Sobic010G258300--Sobic001G031300 Sobic010G258300--Sobic003G222600 Sobic010G258300--Sobic007G205600 Sobic010G258300--Sobic009G154600 Sobic003G170200 Sobic003G170200 Sobic010G258300--Sobic003G170200 Sobic004G011566 Sobic004G011566 Sobic010G258300--Sobic004G011566 Sobic003G030400 Sobic003G030400 Sobic010G258300--Sobic003G030400 Sobic008G073900--Sobic007G110200 Sobic008G073900--Sobic010G258300 Sobic010G113000 Sobic010G113000 Sobic008G073900--Sobic010G113000 Sobic005G129400 Sobic005G129400 Sobic008G073900--Sobic005G129400 Sobic008G073900--Sobic001G031300 Sobic009G148900 Sobic009G148900 Sobic008G073900--Sobic009G148900 Sobic002G156200 Sobic002G156200 Sobic008G073900--Sobic002G156200 Sobic007G190333 Sobic007G190333 Sobic008G073900--Sobic007G190333 Sobic001G159400 Sobic001G159400 Sobic008G073900--Sobic001G159400 Sobic004G131040 Sobic004G131040 Sobic010G000600--Sobic004G131040 Sobic010G000600--Sobic007G110200 Sobic006G153900 Sobic006G153900 Sobic010G000600--Sobic006G153900 Sobic001G300100 Sobic001G300100 Sobic010G000600--Sobic001G300100 Sobic009G193500 Sobic009G193500 Sobic010G000600--Sobic009G193500 Sobic004G210900 Sobic004G210900 Sobic010G000600--Sobic004G210900 Sobic003G381200 Sobic003G381200 Sobic010G000600--Sobic003G381200 Sobic002G276100 Sobic002G276100 Sobic010G000600--Sobic002G276100 Sobic002G181300 Sobic002G181300 Sobic010G000600--Sobic002G181300 Sobic001G388400 Sobic001G388400 Sobic007G205600--Sobic001G388400 Sobic007G205600--Sobic003G170200 Sobic001G537700 Sobic001G537700 Sobic007G205600--Sobic001G537700 Sobic007G205600--Sobic010G258300 Sobic007G205600--Sobic006G220600 Sobic007G205600--Sobic003G222600 Sobic010G211500 Sobic010G211500 Sobic007G205600--Sobic010G211500 Sobic001G450600 Sobic001G450600 Sobic007G205600--Sobic001G450600 Sobic007G205600--Sobic001G031300 Sobic003G222300--Sobic010G258300 Sobic010G245100 Sobic010G245100 Sobic003G222300--Sobic010G245100 Sobic010G052500 Sobic010G052500 Sobic003G222300--Sobic010G052500 Sobic009G213400 Sobic009G213400 Sobic003G222300--Sobic009G213400 Sobic001G093600 Sobic001G093600 Sobic003G222300--Sobic001G093600 Sobic008G177850 Sobic008G177850 Sobic003G222300--Sobic008G177850 Sobic003G222300--Sobic009G154600 Sobic003G222300--Sobic001G031300 Sobic003G107300 Sobic003G107300 Sobic003G222300--Sobic003G107300 Sobic001G031300--Sobic010G258300 Sobic007G076700 Sobic007G076700 Sobic001G031300--Sobic007G076700 Sobic001G031300--Sobic007G205600 Sobic004G035000 Sobic004G035000 Sobic001G031300--Sobic004G035000 Sobic001G031300--Sobic009G154600 Sobic001G031300--Sobic003G222300 Sobic001G377000 Sobic001G377000 Sobic001G031300--Sobic001G377000 Sobic001G191200 Sobic001G191200 Sobic001G031300--Sobic001G191200 Sobic001G031300--Sobic007G110200 Sobic003G222600--Sobic003G030400 Sobic008G148400 Sobic008G148400 Sobic003G222600--Sobic008G148400 Sobic001G114400 Sobic001G114400 Sobic003G222600--Sobic001G114400 Sobic003G222600--Sobic010G258300 Sobic004G070200 Sobic004G070200 Sobic003G222600--Sobic004G070200 Sobic009G137000 Sobic009G137000 Sobic003G222600--Sobic009G137000 Sobic003G222600--Sobic007G205600 Sobic009G233800 Sobic009G233800 Sobic003G222600--Sobic009G233800 Sobic009G036300 Sobic009G036300 Sobic003G222600--Sobic009G036300 Sobic009G154600--Sobic001G191200 Sobic009G154600--Sobic003G107300 Sobic001G423100 Sobic001G423100 Sobic009G154600--Sobic001G423100 Sobic009G154600--Sobic008G148400 Sobic009G154600--Sobic010G258300 Sobic003G406700 Sobic003G406700 Sobic009G154600--Sobic003G406700 Sobic009G154600--Sobic003G222300 Sobic009G154600--Sobic001G031300 Sobic009G154600--Sobic009G213400 Sobic006G220600--Sobic007G205600 Sobic003G422800 Sobic003G422800 Sobic006G220600--Sobic003G422800 Sobic002G163700 Sobic002G163700 Sobic006G220600--Sobic002G163700 Sobic006G220600--Sobic007G110200 Sobic006G220600--Sobic004G210900 Sobic006G220600--Sobic001G450600 Sobic010G189200 Sobic010G189200 Sobic006G220600--Sobic010G189200 Sobic005G138600 Sobic005G138600 Sobic006G220600--Sobic005G138600 Sobic006G220600--Sobic003G222300
Octagon: transcription factors


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