Gene annotation
Transcriptome id Sobic.008G073900.1,Sobic.008G073900.2
Synonym Sb08g006600, scpl20
Functional annotation OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed
UniProt A0A1B6PC05 , A0A1B6PC52
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF62
NCBI CDD KOG1282; Serine carboxypeptidases (lysosomal cathepsin A)
KEGG Orthology K16296; serine carboxypeptidase-like clade I
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT4G12910 : serine carboxypeptidase-like 20
RAP-DB (Rice) LOC_Os12g15470.2 : OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a025628 , Zm00025a054458
Brachypodium KQJ91721 , KQJ91720
Barley HORVU3Hr1G096830.15 , HORVU3Hr1G096830.13 , HORVU3Hr1G096830.12 , HORVU3Hr1G096830.11 , HORVU3Hr1G096830.10 , HORVU3Hr1G096830.9 , HORVU3Hr1G096830.8 , HORVU3Hr1G096830.5 , HORVU3Hr1G096830.4 , HORVU3Hr1G096830.3 , HORVU3Hr1G096830.2 , HORVU3Hr1G096830.1
Wheat TraesCS3B02G481300 , TraesCS3D02G438800 , TraesCS3A02G446200
Populus -


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cDNA sequences
Sobic.008G073900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G110200 wound responsive protein, putative, expressed -
2 Sobic.010G258300 integral membrane protein, putative, expressed -
3 Sobic.010G113000 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
4 Sobic.005G129400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.001G031300 PPR repeat domain containing protein, putative, expressed -
6 Sobic.009G148900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
7 Sobic.002G156200 DUF565 domain containing protein, putative, expressed -
8 Sobic.007G190333 - -
9 Sobic.001G159400 protein kinase domain containing protein, expressed -
10 Sobic.001G090500 YT521-B-like family domain containing protein, expressed -
11 Sobic.009G178300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
12 Sobic.001G384900 hypothetical protein K09250: cellular nucleic acid-binding protein
13 Sobic.003G381200 KH domain containing protein, putative, expressed K14945: protein quaking
14 Sobic.009G154600 glycosyl hydrolases family 17, putative, expressed -
15 Sobic.003G222300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.010G075700 - -
17 Sobic.006G153900 transporter, major facilitator family, putative, expressed -
18 Sobic.004G225000 -(PubMedID : 27964718)@nitrilase, putative, expressed K01501: nitrilase
19 Sobic.009G017400 "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed -
20 Sobic.009G082200 TKL_IRAK_DUF26-lc22 - DUF26 kinases have homology to DUF26 containing loci, expressed -


Gene co-expression network
sample Sobic008G073900 Sobic008G073900 Sobic007G110200 Sobic007G110200 Sobic008G073900--Sobic007G110200 Sobic010G258300 Sobic010G258300 Sobic008G073900--Sobic010G258300 Sobic010G113000 Sobic010G113000 Sobic008G073900--Sobic010G113000 Sobic005G129400 Sobic005G129400 Sobic008G073900--Sobic005G129400 Sobic001G031300 Sobic001G031300 Sobic008G073900--Sobic001G031300 Sobic009G148900 Sobic009G148900 Sobic008G073900--Sobic009G148900 Sobic002G156200 Sobic002G156200 Sobic008G073900--Sobic002G156200 Sobic007G190333 Sobic007G190333 Sobic008G073900--Sobic007G190333 Sobic001G159400 Sobic001G159400 Sobic008G073900--Sobic001G159400 Sobic007G110200--Sobic010G258300 Sobic007G110200--Sobic008G073900 Sobic010G000600 Sobic010G000600 Sobic007G110200--Sobic010G000600 Sobic007G205600 Sobic007G205600 Sobic007G110200--Sobic007G205600 Sobic003G222300 Sobic003G222300 Sobic007G110200--Sobic003G222300 Sobic007G110200--Sobic001G031300 Sobic003G222600 Sobic003G222600 Sobic007G110200--Sobic003G222600 Sobic009G154600 Sobic009G154600 Sobic007G110200--Sobic009G154600 Sobic006G220600 Sobic006G220600 Sobic007G110200--Sobic006G220600 Sobic010G258300--Sobic003G222300 Sobic010G258300--Sobic007G110200 Sobic010G258300--Sobic001G031300 Sobic010G258300--Sobic003G222600 Sobic010G258300--Sobic007G205600 Sobic010G258300--Sobic009G154600 Sobic003G170200 Sobic003G170200 Sobic010G258300--Sobic003G170200 Sobic004G011566 Sobic004G011566 Sobic010G258300--Sobic004G011566 Sobic003G030400 Sobic003G030400 Sobic010G258300--Sobic003G030400 Sobic010G113000--Sobic009G148900 Sobic007G029100 Sobic007G029100 Sobic010G113000--Sobic007G029100 Sobic010G113000--Sobic007G110200 Sobic010G113000--Sobic003G222300 Sobic009G029700 Sobic009G029700 Sobic010G113000--Sobic009G029700 Sobic009G017400 Sobic009G017400 Sobic010G113000--Sobic009G017400 Sobic008G001400 Sobic008G001400 Sobic010G113000--Sobic008G001400 Sobic006G153900 Sobic006G153900 Sobic010G113000--Sobic006G153900 Sobic001G380500 Sobic001G380500 Sobic010G113000--Sobic001G380500 Sobic006G152600 Sobic006G152600 Sobic005G129400--Sobic006G152600 Sobic004G275200 Sobic004G275200 Sobic005G129400--Sobic004G275200 Sobic001G123000 Sobic001G123000 Sobic005G129400--Sobic001G123000 Sobic002G130700 Sobic002G130700 Sobic005G129400--Sobic002G130700 Sobic005G129400--Sobic008G001400 Sobic009G245700 Sobic009G245700 Sobic005G129400--Sobic009G245700 Sobic007G148200 Sobic007G148200 Sobic005G129400--Sobic007G148200 Sobic001G427500 Sobic001G427500 Sobic005G129400--Sobic001G427500 Sobic010G084000 Sobic010G084000 Sobic005G129400--Sobic010G084000 Sobic001G031300--Sobic010G258300 Sobic007G076700 Sobic007G076700 Sobic001G031300--Sobic007G076700 Sobic001G031300--Sobic007G205600 Sobic004G035000 Sobic004G035000 Sobic001G031300--Sobic004G035000 Sobic001G031300--Sobic009G154600 Sobic001G031300--Sobic003G222300 Sobic001G377000 Sobic001G377000 Sobic001G031300--Sobic001G377000 Sobic001G191200 Sobic001G191200 Sobic001G031300--Sobic001G191200 Sobic001G031300--Sobic007G110200 Sobic009G148900--Sobic010G113000 Sobic009G148900--Sobic003G222300 Sobic009G148900--Sobic001G427500 Sobic009G148900--Sobic009G017400 Sobic004G147200 Sobic004G147200 Sobic009G148900--Sobic004G147200 Sobic010G265800 Sobic010G265800 Sobic009G148900--Sobic010G265800 Sobic001G324400 Sobic001G324400 Sobic009G148900--Sobic001G324400 Sobic009G148900--Sobic003G170200 Sobic009G148900--Sobic007G110200 Sobic002G351900 Sobic002G351900 Sobic002G156200--Sobic002G351900 Sobic009G070100 Sobic009G070100 Sobic002G156200--Sobic009G070100 Sobic006G076601 Sobic006G076601 Sobic002G156200--Sobic006G076601 Sobic010G056200 Sobic010G056200 Sobic002G156200--Sobic010G056200 Sobic007G095500 Sobic007G095500 Sobic002G156200--Sobic007G095500 Sobic004G083700 Sobic004G083700 Sobic002G156200--Sobic004G083700 Sobic001G384900 Sobic001G384900 Sobic002G156200--Sobic001G384900 Sobic001G514100 Sobic001G514100 Sobic002G156200--Sobic001G514100 Sobic002G309800 Sobic002G309800 Sobic002G156200--Sobic002G309800 Sobic003G001000 Sobic003G001000 Sobic007G190333--Sobic003G001000 Sobic001G253700 Sobic001G253700 Sobic007G190333--Sobic001G253700 Sobic003G113200 Sobic003G113200 Sobic007G190333--Sobic003G113200 Sobic007G190333--Sobic010G056200 Sobic003G176600 Sobic003G176600 Sobic007G190333--Sobic003G176600 Sobic001G048766 Sobic001G048766 Sobic007G190333--Sobic001G048766 Sobic001G292200 Sobic001G292200 Sobic007G190333--Sobic001G292200 Sobic007G190333--Sobic001G159400 Sobic004G153400 Sobic004G153400 Sobic007G190333--Sobic004G153400 Sobic003G381200 Sobic003G381200 Sobic001G159400--Sobic003G381200 Sobic003G138500 Sobic003G138500 Sobic001G159400--Sobic003G138500 Sobic001G090500 Sobic001G090500 Sobic001G159400--Sobic001G090500 Sobic010G256700 Sobic010G256700 Sobic001G159400--Sobic010G256700 Sobic007G193700 Sobic007G193700 Sobic001G159400--Sobic007G193700 Sobic002G276100 Sobic002G276100 Sobic001G159400--Sobic002G276100 Sobic003G396200 Sobic003G396200 Sobic001G159400--Sobic003G396200 Sobic004G181700 Sobic004G181700 Sobic001G159400--Sobic004G181700 Sobic004G317100 Sobic004G317100 Sobic001G159400--Sobic004G317100
Octagon: transcription factors


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