Gene annotation
Transcriptome id Sobic.009G148900.1,Sobic.009G148900.4,Sobic.009G148900.3,Sobic.009G148900.2,Sobic.009G148900.5
Synonym Sb09g021330
Functional annotation peptide transporter PTR2, putative, expressed
UniProt A0A1Z5R2R8 , A0A1Z5R3Q6 , A0A1Z5R2T0 , C5YYD3
Pfam PF07690
Panther DB PTHR11654 PTHR11654:SF94
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology K14638; SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G22540 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os05g35650.2,LOC_Os05g35650.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a043865 , Zm00025a037322 , Zm00025a033786 , Zm00025a026649 , Zm00025a043863 , Zm00025a039549 , Zm00025a005044
Brachypodium KQK10813 , KQK06086 , KQK06085 , KQK06084 , KQK10814 , KQK10821 , PNT73273 , KQK06087
Barley HORVU3Hr1G082460.1 , HORVU3Hr1G082490.1 , HORVU3Hr1G082490.2 , HORVU3Hr1G082460.2 , HORVU3Hr1G082490.4 , HORVU3Hr1G082490.5 , HORVU3Hr1G082460.7 , HORVU3Hr1G082490.7 , HORVU3Hr1G082460.9 , HORVU3Hr1G082460.8 , HORVU3Hr1G047780.1 , HORVU0Hr1G033190.1 , HORVU3Hr1G082580.10 , HORVU3Hr1G082580.11 , HORVU3Hr1G082580.12 , HORVU3Hr1G082580.13 , HORVU3Hr1G082580.8 , HORVU3Hr1G082580.9 , HORVU3Hr1G082580.2 , HORVU3Hr1G082580.3 , HORVU3Hr1G082580.1 , HORVU3Hr1G082580.6 , HORVU3Hr1G082580.7 , HORVU3Hr1G082580.4 , HORVU3Hr1G082580.5 , HORVU1Hr1G074550.6 , HORVU1Hr1G074550.7 , HORVU1Hr1G074550.4 , HORVU1Hr1G074550.5 , HORVU1Hr1G074550.2 , HORVU1Hr1G074550.3 , HORVU1Hr1G074550.1 , HORVU1Hr1G074550.8 , HORVU1Hr1G074550.9 , HORVU3Hr1G082460.10 , HORVU4Hr1G024090.1 , HORVU3Hr1G082360.6 , HORVU3Hr1G082360.7 , HORVU3Hr1G082360.4 , HORVU3Hr1G082360.5 , HORVU3Hr1G082360.2 , HORVU3Hr1G082360.3 , HORVU3Hr1G082360.8 , HORVU1Hr1G074490.3 , HORVU1Hr1G074490.2 , HORVU1Hr1G074490.1 , HORVU1Hr1G074490.7 , HORVU1Hr1G074490.6 , HORVU1Hr1G074490.5 , HORVU1Hr1G074490.4 , HORVU1Hr1G074490.9 , HORVU1Hr1G074490.8 , HORVU7Hr1G054040.1 , HORVU6Hr1G046920.1 , HORVU7Hr1G031040.1 , HORVU1Hr1G074550.10 , HORVU3Hr1G082460.3 , HORVU3Hr1G082490.3 , HORVU3Hr1G082460.5 , HORVU3Hr1G082460.4 , HORVU3Hr1G082460.6 , HORVU1Hr1G074450.7 , HORVU1Hr1G074450.6 , HORVU1Hr1G074450.5 , HORVU1Hr1G074450.4 , HORVU1Hr1G074450.3 , HORVU1Hr1G074450.2 , HORVU1Hr1G074450.1 , HORVU1Hr1G074450.8 , HORVU1Hr1G074490.10
Wheat TraesCS3A02G382200 , TraesCS3A02G382200 , TraesCS4B02G057000 , TraesCS7B02G040100 , TraesCS1B02G280000 , TraesCS1B02G267900 , TraesCS4B02G375800 , TraesCS5A02G537100 , TraesCS3A02G382300 , TraesCS1D02G269600 , TraesCS3B02G415000 , TraesCS1A02G269600 , TraesCS3B02G414800 , TraesCS1A02G269400 , TraesCS1A02G269400 , TraesCS7D02G139600 , TraesCS3D02G375900 , TraesCS1D02G269500 , TraesCS1B02G280100 , TraesCS1B02G279900 , TraesCS3B02G415200 , TraesCS3D02G375800 , TraesCS3A02G382900 , TraesCS3D02G375700 , TraesCS1A02G269500 , TraesCS2B02G248000 , TraesCS3B02G414800 , TraesCS3B02G304500 , TraesCS3A02G382100 , TraesCS4D02G361500 , TraesCS1D02G269700
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G148900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G113000 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
2 Sobic.003G222300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
3 Sobic.001G427500 B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
4 Sobic.009G017400 "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed -
5 Sobic.004G147200 - -
6 Sobic.010G265800 tyrosine protein kinase domain containing protein, putative, expressed -
7 Sobic.001G324400 thymidine kinase, putative, expressed K00857: tdk, thymidine kinase
8 Sobic.003G170200 OsClp2 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
9 Sobic.007G110200 wound responsive protein, putative, expressed -
10 Sobic.006G220600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
11 Sobic.008G073900 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
12 Sobic.010G175500 expressed protein -
13 Sobic.010G245100 lectin-like receptor kinase 1, putative, expressed -
14 Sobic.010G258300 integral membrane protein, putative, expressed -
15 Sobic.007G029100 ATPase BadF/BadG/BcrA/BcrD type, putative, expressed -
16 Sobic.001G291200 - -
17 Sobic.004G358600 cation efflux family protein, putative, expressed K14692: SLC30A5_7, ZNT5_7, MTP, solute carrier family 30 (zinc transporter), member 5/7
18 Sobic.003G404200 expressed protein -
19 Sobic.002G125900 ORM1, putative, expressed -
20 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -


Gene co-expression network
sample Sobic009G148900 Sobic009G148900 Sobic010G113000 Sobic010G113000 Sobic009G148900--Sobic010G113000 Sobic003G222300 Sobic003G222300 Sobic009G148900--Sobic003G222300 Sobic001G427500 Sobic001G427500 Sobic009G148900--Sobic001G427500 Sobic009G017400 Sobic009G017400 Sobic009G148900--Sobic009G017400 Sobic004G147200 Sobic004G147200 Sobic009G148900--Sobic004G147200 Sobic010G265800 Sobic010G265800 Sobic009G148900--Sobic010G265800 Sobic001G324400 Sobic001G324400 Sobic009G148900--Sobic001G324400 Sobic003G170200 Sobic003G170200 Sobic009G148900--Sobic003G170200 Sobic007G110200 Sobic007G110200 Sobic009G148900--Sobic007G110200 Sobic010G113000--Sobic009G148900 Sobic007G029100 Sobic007G029100 Sobic010G113000--Sobic007G029100 Sobic010G113000--Sobic007G110200 Sobic010G113000--Sobic003G222300 Sobic009G029700 Sobic009G029700 Sobic010G113000--Sobic009G029700 Sobic010G113000--Sobic009G017400 Sobic008G001400 Sobic008G001400 Sobic010G113000--Sobic008G001400 Sobic006G153900 Sobic006G153900 Sobic010G113000--Sobic006G153900 Sobic001G380500 Sobic001G380500 Sobic010G113000--Sobic001G380500 Sobic010G258300 Sobic010G258300 Sobic003G222300--Sobic010G258300 Sobic010G245100 Sobic010G245100 Sobic003G222300--Sobic010G245100 Sobic010G052500 Sobic010G052500 Sobic003G222300--Sobic010G052500 Sobic009G213400 Sobic009G213400 Sobic003G222300--Sobic009G213400 Sobic001G093600 Sobic001G093600 Sobic003G222300--Sobic001G093600 Sobic008G177850 Sobic008G177850 Sobic003G222300--Sobic008G177850 Sobic009G154600 Sobic009G154600 Sobic003G222300--Sobic009G154600 Sobic001G031300 Sobic001G031300 Sobic003G222300--Sobic001G031300 Sobic003G107300 Sobic003G107300 Sobic003G222300--Sobic003G107300 Sobic002G339500 Sobic002G339500 Sobic001G427500--Sobic002G339500 Sobic002G193400 Sobic002G193400 Sobic001G427500--Sobic002G193400 Sobic004G227300 Sobic004G227300 Sobic001G427500--Sobic004G227300 Sobic006G004600 Sobic006G004600 Sobic001G427500--Sobic006G004600 Sobic007G062500 Sobic007G062500 Sobic001G427500--Sobic007G062500 Sobic001G417900 Sobic001G417900 Sobic001G427500--Sobic001G417900 Sobic001G427500--Sobic009G017400 Sobic001G261597 Sobic001G261597 Sobic001G427500--Sobic001G261597 Sobic001G022600 Sobic001G022600 Sobic001G427500--Sobic001G022600 Sobic006G199200 Sobic006G199200 Sobic009G017400--Sobic006G199200 Sobic001G493200 Sobic001G493200 Sobic009G017400--Sobic001G493200 Sobic004G021200 Sobic004G021200 Sobic009G017400--Sobic004G021200 Sobic002G276100 Sobic002G276100 Sobic009G017400--Sobic002G276100 Sobic001G281600 Sobic001G281600 Sobic009G017400--Sobic001G281600 Sobic003G266001 Sobic003G266001 Sobic009G017400--Sobic003G266001 Sobic002G313400 Sobic002G313400 Sobic009G017400--Sobic002G313400 Sobic002G122600 Sobic002G122600 Sobic009G017400--Sobic002G122600 Sobic010G205800 Sobic010G205800 Sobic009G017400--Sobic010G205800 Sobic006G214400 Sobic006G214400 Sobic004G147200--Sobic006G214400 Sobic004G147200--Sobic003G170200 Sobic004G147200--Sobic010G052500 Sobic004G147200--Sobic003G222300 Sobic004G147200--Sobic010G258300 Sobic007G205600 Sobic007G205600 Sobic004G147200--Sobic007G205600 Sobic004G147200--Sobic001G031300 Sobic002G114700 Sobic002G114700 Sobic004G147200--Sobic002G114700 Sobic003G368800 Sobic003G368800 Sobic004G147200--Sobic003G368800 Sobic010G265800--Sobic006G004600 Sobic003G413500 Sobic003G413500 Sobic010G265800--Sobic003G413500 Sobic003G314500 Sobic003G314500 Sobic010G265800--Sobic003G314500 Sobic003G308700 Sobic003G308700 Sobic010G265800--Sobic003G308700 Sobic010G265800--Sobic009G148900 Sobic001G387600 Sobic001G387600 Sobic010G265800--Sobic001G387600 Sobic009G057700 Sobic009G057700 Sobic010G265800--Sobic009G057700 Sobic010G265800--Sobic001G427500 Sobic010G265800--Sobic010G245100 Sobic001G324400--Sobic003G170200 Sobic010G189200 Sobic010G189200 Sobic001G324400--Sobic010G189200 Sobic004G152100 Sobic004G152100 Sobic001G324400--Sobic004G152100 Sobic001G341800 Sobic001G341800 Sobic001G324400--Sobic001G341800 Sobic001G437200 Sobic001G437200 Sobic001G324400--Sobic001G437200 Sobic002G281800 Sobic002G281800 Sobic001G324400--Sobic002G281800 Sobic004G287300 Sobic004G287300 Sobic001G324400--Sobic004G287300 Sobic009G094800 Sobic009G094800 Sobic001G324400--Sobic009G094800 Sobic001G324400--Sobic009G148900 Sobic001G102500 Sobic001G102500 Sobic003G170200--Sobic001G102500 Sobic003G170200--Sobic007G205600 Sobic008G078900 Sobic008G078900 Sobic003G170200--Sobic008G078900 Sobic003G162800 Sobic003G162800 Sobic003G170200--Sobic003G162800 Sobic003G286300 Sobic003G286300 Sobic003G170200--Sobic003G286300 Sobic001G514100 Sobic001G514100 Sobic003G170200--Sobic001G514100 Sobic001G375000 Sobic001G375000 Sobic003G170200--Sobic001G375000 Sobic001G450600 Sobic001G450600 Sobic003G170200--Sobic001G450600 Sobic003G128400 Sobic003G128400 Sobic003G170200--Sobic003G128400 Sobic007G110200--Sobic010G258300 Sobic008G073900 Sobic008G073900 Sobic007G110200--Sobic008G073900 Sobic010G000600 Sobic010G000600 Sobic007G110200--Sobic010G000600 Sobic007G110200--Sobic007G205600 Sobic007G110200--Sobic003G222300 Sobic007G110200--Sobic001G031300 Sobic003G222600 Sobic003G222600 Sobic007G110200--Sobic003G222600 Sobic007G110200--Sobic009G154600 Sobic006G220600 Sobic006G220600 Sobic007G110200--Sobic006G220600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.