Gene annotation
Transcriptome id Sobic.001G427500.3,Sobic.001G427500.2
Synonym Sb01g040160
Functional annotation B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed
UniProt A0A1Z5SAC3 , A0A1Z5SAB8
Pfam -
Panther DB PTHR11145
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G09030 : BTB/POZ domain-containing protein
RAP-DB (Rice) LOC_Os03g15800.1 : B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed
MaizeGDB (Corn) Zm00025a052799
Brachypodium KQK22438
Barley HORVU4Hr1G061080.2 , HORVU4Hr1G061080.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G427500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G339500 diacylglycerol kinase, putative, expressed K04718: sphingosine kinase
2 Sobic.002G193400 lipase, putative, expressed K18875: enhanced disease susceptibility 1 protein
3 Sobic.004G227300 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
4 Sobic.006G004600 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
5 Sobic.007G062500 expressed protein -
6 Sobic.001G417900 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
7 Sobic.009G017400 "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed -
8 Sobic.001G261597 - K07904: Ras-related protein Rab-11A
9 Sobic.001G022600 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
10 Sobic.009G148900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
11 Sobic.009G094800 sugar porter, putative, expressed -
12 Sobic.001G387600 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
13 Sobic.001G364600 transmembrane protein 85, putative, expressed -
14 Sobic.001G258000 tyrosine protein kinase domain containing protein, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
15 Sobic.010G277100 regulator of ribonuclease, putative, expressed -
16 Sobic.005G072200 lipase, putative, expressed -
17 Sobic.002G174900 cysteine desulfurase 1, mitochondrial precursor, putative, expressed K04487: iscS, cysteine desulfurase
18 Sobic.006G054500 membrane-anchored ubiquitin-fold protein, putative, expressed -
19 Sobic.009G190800 thioredoxin, putative, expressed K03671: thioredoxin 1
20 Sobic.010G009400 G-protein alpha subunit, putative, expressed -


Gene co-expression network
sample Sobic001G427500 Sobic001G427500 Sobic002G339500 Sobic002G339500 Sobic001G427500--Sobic002G339500 Sobic002G193400 Sobic002G193400 Sobic001G427500--Sobic002G193400 Sobic004G227300 Sobic004G227300 Sobic001G427500--Sobic004G227300 Sobic006G004600 Sobic006G004600 Sobic001G427500--Sobic006G004600 Sobic007G062500 Sobic007G062500 Sobic001G427500--Sobic007G062500 Sobic001G417900 Sobic001G417900 Sobic001G427500--Sobic001G417900 Sobic009G017400 Sobic009G017400 Sobic001G427500--Sobic009G017400 Sobic001G261597 Sobic001G261597 Sobic001G427500--Sobic001G261597 Sobic001G022600 Sobic001G022600 Sobic001G427500--Sobic001G022600 Sobic002G339500--Sobic001G427500 Sobic001G120300 Sobic001G120300 Sobic002G339500--Sobic001G120300 Sobic002G092300 Sobic002G092300 Sobic002G339500--Sobic002G092300 Sobic002G339500--Sobic002G193400 Sobic001G057200 Sobic001G057200 Sobic002G339500--Sobic001G057200 Sobic004G202700 Sobic004G202700 Sobic002G339500--Sobic004G202700 Sobic010G123400 Sobic010G123400 Sobic002G339500--Sobic010G123400 Sobic006G244700 Sobic006G244700 Sobic002G339500--Sobic006G244700 Sobic010G084000 Sobic010G084000 Sobic002G339500--Sobic010G084000 Sobic002G193400--Sobic001G427500 Sobic002G193400--Sobic001G022600 Sobic002G193400--Sobic002G339500 Sobic003G402200 Sobic003G402200 Sobic002G193400--Sobic003G402200 Sobic006G127400 Sobic006G127400 Sobic002G193400--Sobic006G127400 Sobic009G190800 Sobic009G190800 Sobic002G193400--Sobic009G190800 Sobic005G072200 Sobic005G072200 Sobic002G193400--Sobic005G072200 Sobic001G075000 Sobic001G075000 Sobic002G193400--Sobic001G075000 Sobic006G052200 Sobic006G052200 Sobic002G193400--Sobic006G052200 Sobic004G227300--Sobic001G427500 Sobic004G227300--Sobic001G261597 Sobic006G171700 Sobic006G171700 Sobic004G227300--Sobic006G171700 Sobic003G359900 Sobic003G359900 Sobic004G227300--Sobic003G359900 Sobic003G299000 Sobic003G299000 Sobic004G227300--Sobic003G299000 Sobic004G214100 Sobic004G214100 Sobic004G227300--Sobic004G214100 Sobic002G259400 Sobic002G259400 Sobic004G227300--Sobic002G259400 Sobic004G227300--Sobic007G062500 Sobic006G119800 Sobic006G119800 Sobic004G227300--Sobic006G119800 Sobic006G004600--Sobic001G427500 Sobic010G265800 Sobic010G265800 Sobic006G004600--Sobic010G265800 Sobic007G007000 Sobic007G007000 Sobic006G004600--Sobic007G007000 Sobic002G251700 Sobic002G251700 Sobic006G004600--Sobic002G251700 Sobic003G314500 Sobic003G314500 Sobic006G004600--Sobic003G314500 Sobic006G269000 Sobic006G269000 Sobic006G004600--Sobic006G269000 Sobic001G004700 Sobic001G004700 Sobic006G004600--Sobic001G004700 Sobic001G387600 Sobic001G387600 Sobic006G004600--Sobic001G387600 Sobic004G210900 Sobic004G210900 Sobic006G004600--Sobic004G210900 Sobic001G043800 Sobic001G043800 Sobic007G062500--Sobic001G043800 Sobic007G062500--Sobic001G427500 Sobic007G062500--Sobic004G227300 Sobic004G086700 Sobic004G086700 Sobic007G062500--Sobic004G086700 Sobic010G184600 Sobic010G184600 Sobic007G062500--Sobic010G184600 Sobic009G094800 Sobic009G094800 Sobic007G062500--Sobic009G094800 Sobic001G053000 Sobic001G053000 Sobic007G062500--Sobic001G053000 Sobic004G174400 Sobic004G174400 Sobic007G062500--Sobic004G174400 Sobic007G062500--Sobic009G190800 Sobic003G077900 Sobic003G077900 Sobic001G417900--Sobic003G077900 Sobic002G431600 Sobic002G431600 Sobic001G417900--Sobic002G431600 Sobic003G122500 Sobic003G122500 Sobic001G417900--Sobic003G122500 Sobic010G277100 Sobic010G277100 Sobic001G417900--Sobic010G277100 Sobic002G071000 Sobic002G071000 Sobic001G417900--Sobic002G071000 Sobic001G417900--Sobic003G299000 Sobic001G049500 Sobic001G049500 Sobic001G417900--Sobic001G049500 Sobic001G417900--Sobic001G427500 Sobic001G414500 Sobic001G414500 Sobic001G417900--Sobic001G414500 Sobic006G199200 Sobic006G199200 Sobic009G017400--Sobic006G199200 Sobic001G493200 Sobic001G493200 Sobic009G017400--Sobic001G493200 Sobic004G021200 Sobic004G021200 Sobic009G017400--Sobic004G021200 Sobic002G276100 Sobic002G276100 Sobic009G017400--Sobic002G276100 Sobic001G281600 Sobic001G281600 Sobic009G017400--Sobic001G281600 Sobic003G266001 Sobic003G266001 Sobic009G017400--Sobic003G266001 Sobic002G313400 Sobic002G313400 Sobic009G017400--Sobic002G313400 Sobic002G122600 Sobic002G122600 Sobic009G017400--Sobic002G122600 Sobic010G205800 Sobic010G205800 Sobic009G017400--Sobic010G205800 Sobic001G261597--Sobic004G227300 Sobic003G000150 Sobic003G000150 Sobic001G261597--Sobic003G000150 Sobic001G261597--Sobic004G214100 Sobic002G073900 Sobic002G073900 Sobic001G261597--Sobic002G073900 Sobic001G261597--Sobic003G359900 Sobic001G261597--Sobic001G427500 Sobic001G261597--Sobic005G072200 Sobic002G040800 Sobic002G040800 Sobic001G261597--Sobic002G040800 Sobic001G261597--Sobic009G190800 Sobic001G022600--Sobic009G190800 Sobic001G022600--Sobic004G214100 Sobic001G022600--Sobic002G193400 Sobic008G142600 Sobic008G142600 Sobic001G022600--Sobic008G142600 Sobic002G117200 Sobic002G117200 Sobic001G022600--Sobic002G117200 Sobic001G022600--Sobic001G427500 Sobic004G174100 Sobic004G174100 Sobic001G022600--Sobic004G174100 Sobic001G427700 Sobic001G427700 Sobic001G022600--Sobic001G427700 Sobic001G022600--Sobic003G359900
Octagon: transcription factors


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