Gene annotation
Transcriptome id Sobic.001G364600.1
Synonym Sb01g034760
Functional annotation transmembrane protein 85, putative, expressed
UniProt C5WZL2
Pfam PF06417
Panther DB PTHR19315 PTHR19315:SF9
NCBI CDD KOG3318; Predicted membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G10780 : -
RAP-DB (Rice) LOC_Os03g24580.1 : transmembrane protein 85, putative, expressed
MaizeGDB (Corn) Zm00025a052325
Brachypodium -
Barley HORVU4Hr1G047340.1 , HORVU4Hr1G047340.2 , HORVU4Hr1G047340.3 , HORVU4Hr1G047340.4 , HORVU4Hr1G047340.5
Wheat TraesCS4B02G155900 , TraesCS4A02G138400 , TraesCS4A02G138400 , TraesCS4D02G156600
Populus -


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cDNA sequences
Sobic.001G364600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G277100 regulator of ribonuclease, putative, expressed -
2 Sobic.007G168600 vesicle-associated membrane protein 727, putative, expressed K08511: vesicle-associated membrane protein 72
3 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC
4 Sobic.003G077900 vacuolar protein sorting-associating protein 4B, putative, expressed K12196: vacuolar protein-sorting-associated protein 4
5 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
6 Sobic.003G050600 expressed protein -
7 Sobic.003G127300 expressed protein -
8 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
9 Sobic.001G314500 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
10 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
11 Sobic.006G054500 membrane-anchored ubiquitin-fold protein, putative, expressed -
12 Sobic.009G199700 expressed protein -
13 Sobic.004G001400 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
14 Sobic.002G273900 expressed protein -
15 Sobic.006G262900 expressed protein -
16 Sobic.004G272300 expressed protein -
17 Sobic.007G079700 pentatricopeptide, putative, expressed -
18 Sobic.004G232800 expressed protein -
19 Sobic.003G217400 zinc finger, C3HC4 type family protein, expressed -
20 Sobic.007G166100 no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic001G364600 Sobic001G364600 Sobic010G277100 Sobic010G277100 Sobic001G364600--Sobic010G277100 Sobic007G168600 Sobic007G168600 Sobic001G364600--Sobic007G168600 Sobic004G060600 Sobic004G060600 Sobic001G364600--Sobic004G060600 Sobic003G077900 Sobic003G077900 Sobic001G364600--Sobic003G077900 Sobic002G400000 Sobic002G400000 Sobic001G364600--Sobic002G400000 Sobic003G050600 Sobic003G050600 Sobic001G364600--Sobic003G050600 Sobic003G127300 Sobic003G127300 Sobic001G364600--Sobic003G127300 Sobic009G004600 Sobic009G004600 Sobic001G364600--Sobic009G004600 Sobic001G314500 Sobic001G314500 Sobic001G364600--Sobic001G314500 Sobic010G277100--Sobic001G364600 Sobic005G168600 Sobic005G168600 Sobic010G277100--Sobic005G168600 Sobic010G277100--Sobic003G077900 Sobic001G417900 Sobic001G417900 Sobic010G277100--Sobic001G417900 Sobic001G053000 Sobic001G053000 Sobic010G277100--Sobic001G053000 Sobic002G111200 Sobic002G111200 Sobic010G277100--Sobic002G111200 Sobic010G049100 Sobic010G049100 Sobic010G277100--Sobic010G049100 Sobic001G014800 Sobic001G014800 Sobic010G277100--Sobic001G014800 Sobic007G188300 Sobic007G188300 Sobic010G277100--Sobic007G188300 Sobic007G168600--Sobic002G400000 Sobic009G198500 Sobic009G198500 Sobic007G168600--Sobic009G198500 Sobic004G086600 Sobic004G086600 Sobic007G168600--Sobic004G086600 Sobic001G502200 Sobic001G502200 Sobic007G168600--Sobic001G502200 Sobic007G168600--Sobic003G077900 Sobic010G205300 Sobic010G205300 Sobic007G168600--Sobic010G205300 Sobic003G124800 Sobic003G124800 Sobic007G168600--Sobic003G124800 Sobic001G461900 Sobic001G461900 Sobic007G168600--Sobic001G461900 Sobic007G168600--Sobic001G314500 Sobic004G060600--Sobic003G077900 Sobic004G060600--Sobic002G400000 Sobic009G131100 Sobic009G131100 Sobic004G060600--Sobic009G131100 Sobic001G428100 Sobic001G428100 Sobic004G060600--Sobic001G428100 Sobic007G203700 Sobic007G203700 Sobic004G060600--Sobic007G203700 Sobic004G060600--Sobic009G198500 Sobic004G060600--Sobic007G168600 Sobic003G117300 Sobic003G117300 Sobic004G060600--Sobic003G117300 Sobic004G060600--Sobic001G364600 Sobic003G077900--Sobic002G400000 Sobic003G077900--Sobic007G168600 Sobic003G217400 Sobic003G217400 Sobic003G077900--Sobic003G217400 Sobic010G188100 Sobic010G188100 Sobic003G077900--Sobic010G188100 Sobic003G077900--Sobic004G060600 Sobic001G220400 Sobic001G220400 Sobic003G077900--Sobic001G220400 Sobic004G348900 Sobic004G348900 Sobic003G077900--Sobic004G348900 Sobic009G219900 Sobic009G219900 Sobic003G077900--Sobic009G219900 Sobic004G130900 Sobic004G130900 Sobic003G077900--Sobic004G130900 Sobic002G400000--Sobic007G168600 Sobic002G400000--Sobic003G077900 Sobic002G400000--Sobic009G198500 Sobic002G400000--Sobic004G130900 Sobic001G433400 Sobic001G433400 Sobic002G400000--Sobic001G433400 Sobic001G395400 Sobic001G395400 Sobic002G400000--Sobic001G395400 Sobic004G327300 Sobic004G327300 Sobic002G400000--Sobic004G327300 Sobic002G400000--Sobic009G004600 Sobic010G000900 Sobic010G000900 Sobic002G400000--Sobic010G000900 Sobic004G253000 Sobic004G253000 Sobic003G050600--Sobic004G253000 Sobic002G256300 Sobic002G256300 Sobic003G050600--Sobic002G256300 Sobic002G273900 Sobic002G273900 Sobic003G050600--Sobic002G273900 Sobic010G083700 Sobic010G083700 Sobic003G050600--Sobic010G083700 Sobic004G001400 Sobic004G001400 Sobic003G050600--Sobic004G001400 Sobic003G050600--Sobic001G364600 Sobic001G098200 Sobic001G098200 Sobic003G050600--Sobic001G098200 Sobic003G015900 Sobic003G015900 Sobic003G050600--Sobic003G015900 Sobic004G059000 Sobic004G059000 Sobic003G050600--Sobic004G059000 Sobic009G199700 Sobic009G199700 Sobic003G127300--Sobic009G199700 Sobic003G127300--Sobic001G364600 Sobic002G298300 Sobic002G298300 Sobic003G127300--Sobic002G298300 Sobic001G341500 Sobic001G341500 Sobic003G127300--Sobic001G341500 Sobic003G127300--Sobic004G060600 Sobic004G074300 Sobic004G074300 Sobic003G127300--Sobic004G074300 Sobic002G242200 Sobic002G242200 Sobic003G127300--Sobic002G242200 Sobic003G405900 Sobic003G405900 Sobic003G127300--Sobic003G405900 Sobic008G137600 Sobic008G137600 Sobic003G127300--Sobic008G137600 Sobic009G004600--Sobic002G400000 Sobic004G356900 Sobic004G356900 Sobic009G004600--Sobic004G356900 Sobic009G004600--Sobic003G217400 Sobic009G004600--Sobic009G198500 Sobic001G263000 Sobic001G263000 Sobic009G004600--Sobic001G263000 Sobic009G004600--Sobic001G314500 Sobic002G113900 Sobic002G113900 Sobic009G004600--Sobic002G113900 Sobic009G004600--Sobic010G205300 Sobic009G004600--Sobic007G168600 Sobic006G212100 Sobic006G212100 Sobic001G314500--Sobic006G212100 Sobic001G314500--Sobic009G198500 Sobic001G314500--Sobic007G168600 Sobic001G388200 Sobic001G388200 Sobic001G314500--Sobic001G388200 Sobic006G232200 Sobic006G232200 Sobic001G314500--Sobic006G232200 Sobic001G054200 Sobic001G054200 Sobic001G314500--Sobic001G054200 Sobic001G314500--Sobic009G004600 Sobic001G314500--Sobic010G205300 Sobic001G314500--Sobic003G217400
Octagon: transcription factors


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