Gene annotation
Transcriptome id Sobic.002G273900.1
Synonym Sb02g030750
Functional annotation expressed protein
UniProt A0A1B6QDS5
Pfam -
Panther DB PTHR34566 PTHR34566:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G51100 : -
RAP-DB (Rice) LOC_Os09g36100.2 : expressed protein
MaizeGDB (Corn) Zm00025a014423 , Zm00025a047774
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G059000 serine/threonine-protein kinase HT1, putative, expressed -
2 Sobic.004G253000 AGAP000425-PA, putative, expressed K13120: protein FAM32A
3 Sobic.003G050600 expressed protein -
4 Sobic.007G079700 pentatricopeptide, putative, expressed -
5 Sobic.006G054500 membrane-anchored ubiquitin-fold protein, putative, expressed -
6 Sobic.001G364600 transmembrane protein 85, putative, expressed -
7 Sobic.007G097900 OsFBL45 - F-box domain and LRR containing protein, expressed -
8 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
9 Sobic.008G128600 miro, putative, expressed K07953: GTP-binding protein SAR1
10 Sobic.002G132300 Ser/Thr protein phosphatase family protein, putative, expressed K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
11 Sobic.007G115200 hydrolase, NUDIX family, domain containing protein, expressed -
12 Sobic.001G136900 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
13 Sobic.002G365100 RNA recognition motif containing protein, putative, expressed -
14 Sobic.004G119000 OsFBK6 - F-box domain and kelch repeat containing protein, expressed -
15 Sobic.001G512900 heat shock protein DnaJ, putative, expressed K09537: DnaJ homolog subfamily C member 17
16 Sobic.001G098200 magnesium-dependent phosphatase 1, putative, expressed K17619: magnesium-dependent phosphatase 1
17 Sobic.004G305600 SKIP/SNW domain containing protein, expressed K06063: SNW1, SKIIP, SNW domain-containing protein 1
18 Sobic.002G187801 - K03134: transcription initiation factor TFIID subunit 10
19 Sobic.001G119300 mRNA cap guanine-N7 methyltransferase 1, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
20 Sobic.004G074300 phytoene dehydrogenase-like, putative, expressed K16750: biogenesis of lysosome-related organelles complex 1 subunit 2


Gene co-expression network
sample Sobic002G273900 Sobic002G273900 Sobic004G059000 Sobic004G059000 Sobic002G273900--Sobic004G059000 Sobic004G253000 Sobic004G253000 Sobic002G273900--Sobic004G253000 Sobic003G050600 Sobic003G050600 Sobic002G273900--Sobic003G050600 Sobic007G079700 Sobic007G079700 Sobic002G273900--Sobic007G079700 Sobic006G054500 Sobic006G054500 Sobic002G273900--Sobic006G054500 Sobic001G364600 Sobic001G364600 Sobic002G273900--Sobic001G364600 Sobic007G097900 Sobic007G097900 Sobic002G273900--Sobic007G097900 Sobic003G250500 Sobic003G250500 Sobic002G273900--Sobic003G250500 Sobic008G128600 Sobic008G128600 Sobic002G273900--Sobic008G128600 Sobic004G305600 Sobic004G305600 Sobic004G059000--Sobic004G305600 Sobic001G061700 Sobic001G061700 Sobic004G059000--Sobic001G061700 Sobic004G059000--Sobic003G250500 Sobic007G019800 Sobic007G019800 Sobic004G059000--Sobic007G019800 Sobic004G059000--Sobic004G253000 Sobic001G131800 Sobic001G131800 Sobic004G059000--Sobic001G131800 Sobic002G256300 Sobic002G256300 Sobic004G059000--Sobic002G256300 Sobic002G365100 Sobic002G365100 Sobic004G059000--Sobic002G365100 Sobic003G405700 Sobic003G405700 Sobic004G059000--Sobic003G405700 Sobic004G253000--Sobic003G050600 Sobic010G083700 Sobic010G083700 Sobic004G253000--Sobic010G083700 Sobic001G098200 Sobic001G098200 Sobic004G253000--Sobic001G098200 Sobic003G015900 Sobic003G015900 Sobic004G253000--Sobic003G015900 Sobic004G253000--Sobic003G250500 Sobic004G253000--Sobic004G059000 Sobic001G051200 Sobic001G051200 Sobic004G253000--Sobic001G051200 Sobic009G246950 Sobic009G246950 Sobic004G253000--Sobic009G246950 Sobic003G000800 Sobic003G000800 Sobic004G253000--Sobic003G000800 Sobic003G050600--Sobic004G253000 Sobic003G050600--Sobic002G256300 Sobic003G050600--Sobic002G273900 Sobic003G050600--Sobic010G083700 Sobic004G001400 Sobic004G001400 Sobic003G050600--Sobic004G001400 Sobic003G050600--Sobic001G364600 Sobic003G050600--Sobic001G098200 Sobic003G050600--Sobic003G015900 Sobic003G050600--Sobic004G059000 Sobic009G114800 Sobic009G114800 Sobic007G079700--Sobic009G114800 Sobic007G079700--Sobic006G054500 Sobic006G262900 Sobic006G262900 Sobic007G079700--Sobic006G262900 Sobic007G079700--Sobic002G273900 Sobic009G199700 Sobic009G199700 Sobic007G079700--Sobic009G199700 Sobic003G116700 Sobic003G116700 Sobic007G079700--Sobic003G116700 Sobic004G301900 Sobic004G301900 Sobic007G079700--Sobic004G301900 Sobic007G079700--Sobic004G253000 Sobic004G272300 Sobic004G272300 Sobic007G079700--Sobic004G272300 Sobic006G054500--Sobic007G079700 Sobic009G004600 Sobic009G004600 Sobic006G054500--Sobic009G004600 Sobic004G060600 Sobic004G060600 Sobic006G054500--Sobic004G060600 Sobic006G054500--Sobic004G301900 Sobic002G113900 Sobic002G113900 Sobic006G054500--Sobic002G113900 Sobic004G074300 Sobic004G074300 Sobic006G054500--Sobic004G074300 Sobic006G054500--Sobic001G364600 Sobic006G054500--Sobic002G273900 Sobic010G090900 Sobic010G090900 Sobic006G054500--Sobic010G090900 Sobic010G277100 Sobic010G277100 Sobic001G364600--Sobic010G277100 Sobic007G168600 Sobic007G168600 Sobic001G364600--Sobic007G168600 Sobic001G364600--Sobic004G060600 Sobic003G077900 Sobic003G077900 Sobic001G364600--Sobic003G077900 Sobic002G400000 Sobic002G400000 Sobic001G364600--Sobic002G400000 Sobic001G364600--Sobic003G050600 Sobic003G127300 Sobic003G127300 Sobic001G364600--Sobic003G127300 Sobic001G364600--Sobic009G004600 Sobic001G314500 Sobic001G314500 Sobic001G364600--Sobic001G314500 Sobic006G183000 Sobic006G183000 Sobic007G097900--Sobic006G183000 Sobic010G267500 Sobic010G267500 Sobic007G097900--Sobic010G267500 Sobic007G097900--Sobic004G059000 Sobic005G160400 Sobic005G160400 Sobic007G097900--Sobic005G160400 Sobic002G242200 Sobic002G242200 Sobic007G097900--Sobic002G242200 Sobic002G418700 Sobic002G418700 Sobic007G097900--Sobic002G418700 Sobic001G105500 Sobic001G105500 Sobic007G097900--Sobic001G105500 Sobic002G129000 Sobic002G129000 Sobic007G097900--Sobic002G129000 Sobic007G097900--Sobic001G061700 Sobic003G250500--Sobic004G059000 Sobic003G250500--Sobic004G305600 Sobic003G250500--Sobic004G301900 Sobic008G062000 Sobic008G062000 Sobic003G250500--Sobic008G062000 Sobic001G281600 Sobic001G281600 Sobic003G250500--Sobic001G281600 Sobic003G226500 Sobic003G226500 Sobic003G250500--Sobic003G226500 Sobic003G250500--Sobic004G253000 Sobic001G512600 Sobic001G512600 Sobic003G250500--Sobic001G512600 Sobic001G119300 Sobic001G119300 Sobic003G250500--Sobic001G119300 Sobic010G067700 Sobic010G067700 Sobic008G128600--Sobic010G067700 Sobic009G054700 Sobic009G054700 Sobic008G128600--Sobic009G054700 Sobic001G512900 Sobic001G512900 Sobic008G128600--Sobic001G512900 Sobic008G128600--Sobic003G250500 Sobic008G128600--Sobic001G131800 Sobic009G178600 Sobic009G178600 Sobic008G128600--Sobic009G178600 Sobic001G083600 Sobic001G083600 Sobic008G128600--Sobic001G083600 Sobic009G198100 Sobic009G198100 Sobic008G128600--Sobic009G198100 Sobic006G252300 Sobic006G252300 Sobic008G128600--Sobic006G252300
Octagon: transcription factors


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