Gene annotation
Transcriptome id Sobic.007G097900.1
Synonym SKIP1, Sb07g010220
Functional annotation OsFBL45 - F-box domain and LRR containing protein, expressed
UniProt C5YJY9
Pfam -
Panther DB PTHR24006
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57900 : SKP1 interacting partner 1
RAP-DB (Rice) LOC_Os08g16840.1 : OsFBL45 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) Zm00025a030849
Brachypodium KQJ95860
Barley -
Wheat TraesCS1A02G056500 , TraesCS1A02G056500 , TraesCS1D02G057200 , TraesCS1D02G057200 , TraesCS1D02G057200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G183000 RING zinc finger protein, putative, expressed -
2 Sobic.010G267500 bZIP orthologous(PubMedID : 28671251)@E2F-related protein, putative, expressed -
3 Sobic.004G059000 serine/threonine-protein kinase HT1, putative, expressed -
4 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
5 Sobic.002G242200 expressed protein -
6 Sobic.002G418700 expressed protein -
7 Sobic.001G105500 heat shock protein DnaJ, putative, expressed -
8 Sobic.002G129000 RING zinc finger protein, putative, expressed -
9 Sobic.001G061700 "similar to BTB/POZ domain containing protein, expressed"(PubMedID : 29862293)@MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
10 Sobic.006G207500 expressed protein -
11 Sobic.001G332300 expressed protein -
12 Sobic.001G341500 transcription initiation factor IID, putative, expressed K03133: TAF9B, transcription initiation factor TFIID subunit 9B
13 Sobic.001G430800 GA17271-PA, putative, expressed -
14 Sobic.002G273900 expressed protein -
15 Sobic.006G121300 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
16 Sobic.009G033900 snurportin-1, putative, expressed K13151: SNUPN, snurportin-1
17 Sobic.008G137600 RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
18 Sobic.006G054500 membrane-anchored ubiquitin-fold protein, putative, expressed -
19 Sobic.006G109700 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
20 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2


Gene co-expression network
sample Sobic007G097900 Sobic007G097900 Sobic006G183000 Sobic006G183000 Sobic007G097900--Sobic006G183000 Sobic010G267500 Sobic010G267500 Sobic007G097900--Sobic010G267500 Sobic004G059000 Sobic004G059000 Sobic007G097900--Sobic004G059000 Sobic005G160400 Sobic005G160400 Sobic007G097900--Sobic005G160400 Sobic002G242200 Sobic002G242200 Sobic007G097900--Sobic002G242200 Sobic002G418700 Sobic002G418700 Sobic007G097900--Sobic002G418700 Sobic001G105500 Sobic001G105500 Sobic007G097900--Sobic001G105500 Sobic002G129000 Sobic002G129000 Sobic007G097900--Sobic002G129000 Sobic001G061700 Sobic001G061700 Sobic007G097900--Sobic001G061700 Sobic006G183000--Sobic002G129000 Sobic001G294900 Sobic001G294900 Sobic006G183000--Sobic001G294900 Sobic009G033900 Sobic009G033900 Sobic006G183000--Sobic009G033900 Sobic006G109700 Sobic006G109700 Sobic006G183000--Sobic006G109700 Sobic002G268400 Sobic002G268400 Sobic006G183000--Sobic002G268400 Sobic001G136900 Sobic001G136900 Sobic006G183000--Sobic001G136900 Sobic009G050700 Sobic009G050700 Sobic006G183000--Sobic009G050700 Sobic003G405700 Sobic003G405700 Sobic006G183000--Sobic003G405700 Sobic006G094600 Sobic006G094600 Sobic006G183000--Sobic006G094600 Sobic006G207500 Sobic006G207500 Sobic010G267500--Sobic006G207500 Sobic004G060600 Sobic004G060600 Sobic010G267500--Sobic004G060600 Sobic010G267500--Sobic007G097900 Sobic003G369500 Sobic003G369500 Sobic010G267500--Sobic003G369500 Sobic003G402600 Sobic003G402600 Sobic010G267500--Sobic003G402600 Sobic007G226100 Sobic007G226100 Sobic010G267500--Sobic007G226100 Sobic003G361500 Sobic003G361500 Sobic010G267500--Sobic003G361500 Sobic004G001400 Sobic004G001400 Sobic010G267500--Sobic004G001400 Sobic008G137600 Sobic008G137600 Sobic010G267500--Sobic008G137600 Sobic004G305600 Sobic004G305600 Sobic004G059000--Sobic004G305600 Sobic004G059000--Sobic001G061700 Sobic003G250500 Sobic003G250500 Sobic004G059000--Sobic003G250500 Sobic007G019800 Sobic007G019800 Sobic004G059000--Sobic007G019800 Sobic004G253000 Sobic004G253000 Sobic004G059000--Sobic004G253000 Sobic001G131800 Sobic001G131800 Sobic004G059000--Sobic001G131800 Sobic002G256300 Sobic002G256300 Sobic004G059000--Sobic002G256300 Sobic002G365100 Sobic002G365100 Sobic004G059000--Sobic002G365100 Sobic004G059000--Sobic003G405700 Sobic009G092400 Sobic009G092400 Sobic005G160400--Sobic009G092400 Sobic007G084100 Sobic007G084100 Sobic005G160400--Sobic007G084100 Sobic010G237900 Sobic010G237900 Sobic005G160400--Sobic010G237900 Sobic010G092300 Sobic010G092300 Sobic005G160400--Sobic010G092300 Sobic002G347000 Sobic002G347000 Sobic005G160400--Sobic002G347000 Sobic001G473600 Sobic001G473600 Sobic005G160400--Sobic001G473600 Sobic010G265300 Sobic010G265300 Sobic005G160400--Sobic010G265300 Sobic006G121300 Sobic006G121300 Sobic005G160400--Sobic006G121300 Sobic001G114500 Sobic001G114500 Sobic005G160400--Sobic001G114500 Sobic002G242200--Sobic007G097900 Sobic002G242200--Sobic005G160400 Sobic003G127300 Sobic003G127300 Sobic002G242200--Sobic003G127300 Sobic003G299000 Sobic003G299000 Sobic002G242200--Sobic003G299000 Sobic002G242200--Sobic010G092300 Sobic001G207500 Sobic001G207500 Sobic002G242200--Sobic001G207500 Sobic002G242200--Sobic010G265300 Sobic004G318000 Sobic004G318000 Sobic002G242200--Sobic004G318000 Sobic002G009200 Sobic002G009200 Sobic002G242200--Sobic002G009200 Sobic001G323000 Sobic001G323000 Sobic002G418700--Sobic001G323000 Sobic006G194500 Sobic006G194500 Sobic002G418700--Sobic006G194500 Sobic001G117300 Sobic001G117300 Sobic002G418700--Sobic001G117300 Sobic003G312200 Sobic003G312200 Sobic002G418700--Sobic003G312200 Sobic007G077400 Sobic007G077400 Sobic002G418700--Sobic007G077400 Sobic001G143500 Sobic001G143500 Sobic002G418700--Sobic001G143500 Sobic009G228700 Sobic009G228700 Sobic002G418700--Sobic009G228700 Sobic001G085100 Sobic001G085100 Sobic002G418700--Sobic001G085100 Sobic002G418700--Sobic004G059000 Sobic001G031600 Sobic001G031600 Sobic001G105500--Sobic001G031600 Sobic009G219000 Sobic009G219000 Sobic001G105500--Sobic009G219000 Sobic009G193400 Sobic009G193400 Sobic001G105500--Sobic009G193400 Sobic002G040700 Sobic002G040700 Sobic001G105500--Sobic002G040700 Sobic001G391600 Sobic001G391600 Sobic001G105500--Sobic001G391600 Sobic001G541100 Sobic001G541100 Sobic001G105500--Sobic001G541100 Sobic006G225600 Sobic006G225600 Sobic001G105500--Sobic006G225600 Sobic001G105500--Sobic009G050700 Sobic001G105500--Sobic001G323000 Sobic002G129000--Sobic006G183000 Sobic001G439600 Sobic001G439600 Sobic002G129000--Sobic001G439600 Sobic002G129000--Sobic009G050700 Sobic002G129000--Sobic001G294900 Sobic002G400000 Sobic002G400000 Sobic002G129000--Sobic002G400000 Sobic010G168600 Sobic010G168600 Sobic002G129000--Sobic010G168600 Sobic002G129000--Sobic001G136900 Sobic006G263900 Sobic006G263900 Sobic002G129000--Sobic006G263900 Sobic002G129000--Sobic003G405700 Sobic001G061700--Sobic004G059000 Sobic002G272600 Sobic002G272600 Sobic001G061700--Sobic002G272600 Sobic003G350600 Sobic003G350600 Sobic001G061700--Sobic003G350600 Sobic007G205000 Sobic007G205000 Sobic001G061700--Sobic007G205000 Sobic001G061700--Sobic002G365100 Sobic010G105600 Sobic010G105600 Sobic001G061700--Sobic010G105600 Sobic003G273500 Sobic003G273500 Sobic001G061700--Sobic003G273500 Sobic001G028400 Sobic001G028400 Sobic001G061700--Sobic001G028400 Sobic002G378200 Sobic002G378200 Sobic001G061700--Sobic002G378200
Octagon: transcription factors


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