Gene annotation
Transcriptome id Sobic.001G332300.3,Sobic.001G332300.1
Synonym Sb01g032100
Functional annotation expressed protein
UniProt C5WVP5 , A0A1Z5S8W0
Pfam PF05915
Panther DB PTHR15664 PTHR15664:SF3
NCBI CDD KOG4753; Predicted membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G29170 : Eukaryotic protein of unknown function (DUF872)
RAP-DB (Rice) LOC_Os12g03500.2 : expressed protein
MaizeGDB (Corn) Zm00025a002946
Brachypodium -
Barley -
Wheat TraesCS7B02G294700 , TraesCS7A02G392700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G184200 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein
2 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
3 Sobic.004G025300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
4 Sobic.001G112400 cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed K02258: COX11, cytochrome c oxidase assembly protein subunit 11
5 Sobic.001G404200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17790: mitochondrial import inner membrane translocase subunit TIM22
6 Sobic.001G358500 GA20734-PA, putative, expressed -
7 Sobic.006G083100 formyl transferase, putative, expressed K00601: phosphoribosylglycinamide formyltransferase
8 Sobic.003G374000 ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed K17618: ubiquitin-like domain-containing CTD phosphatase 1
9 Sobic.002G136400 expressed protein -
10 Sobic.007G014900 STIP1 homology and U box-containing protein 1, putative, expressed K09561: STUB1, STIP1 homology and U-box containing protein 1
11 Sobic.002G238400 expressed protein -
12 Sobic.007G097900 OsFBL45 - F-box domain and LRR containing protein, expressed -
13 Sobic.001G341500 transcription initiation factor IID, putative, expressed K03133: TAF9B, transcription initiation factor TFIID subunit 9B
14 Sobic.003G102600 K-dependent Na/Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K13754: SLC24A6, solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
15 Sobic.001G451901 - -
16 Sobic.005G207400 - -
17 Sobic.003G127300 expressed protein -
18 Sobic.006G029000 nicotiana lesion-inducing like, putative, expressed -
19 Sobic.003G116600 syntaxin, putative, expressed K08488: syntaxin 7
20 Sobic.008G145100 glycosyl transferase, group 1 domain containing protein, expressed K03844: alpha-1,2-mannosyltransferase


Gene co-expression network
sample Sobic001G332300 Sobic001G332300 Sobic005G184200 Sobic005G184200 Sobic001G332300--Sobic005G184200 Sobic001G378200 Sobic001G378200 Sobic001G332300--Sobic001G378200 Sobic004G025300 Sobic004G025300 Sobic001G332300--Sobic004G025300 Sobic001G112400 Sobic001G112400 Sobic001G332300--Sobic001G112400 Sobic001G404200 Sobic001G404200 Sobic001G332300--Sobic001G404200 Sobic001G358500 Sobic001G358500 Sobic001G332300--Sobic001G358500 Sobic006G083100 Sobic006G083100 Sobic001G332300--Sobic006G083100 Sobic003G374000 Sobic003G374000 Sobic001G332300--Sobic003G374000 Sobic002G136400 Sobic002G136400 Sobic001G332300--Sobic002G136400 Sobic005G184200--Sobic001G112400 Sobic003G116600 Sobic003G116600 Sobic005G184200--Sobic003G116600 Sobic001G443200 Sobic001G443200 Sobic005G184200--Sobic001G443200 Sobic003G217100 Sobic003G217100 Sobic005G184200--Sobic003G217100 Sobic005G184200--Sobic001G332300 Sobic004G344800 Sobic004G344800 Sobic005G184200--Sobic004G344800 Sobic002G090700 Sobic002G090700 Sobic005G184200--Sobic002G090700 Sobic005G184200--Sobic001G378200 Sobic008G110500 Sobic008G110500 Sobic005G184200--Sobic008G110500 Sobic001G465400 Sobic001G465400 Sobic001G378200--Sobic001G465400 Sobic001G378200--Sobic001G112400 Sobic006G012700 Sobic006G012700 Sobic001G378200--Sobic006G012700 Sobic004G078700 Sobic004G078700 Sobic001G378200--Sobic004G078700 Sobic004G039400 Sobic004G039400 Sobic001G378200--Sobic004G039400 Sobic001G378200--Sobic001G443200 Sobic001G008100 Sobic001G008100 Sobic001G378200--Sobic001G008100 Sobic002G262200 Sobic002G262200 Sobic001G378200--Sobic002G262200 Sobic005G207400 Sobic005G207400 Sobic001G378200--Sobic005G207400 Sobic004G025300--Sobic001G332300 Sobic004G025300--Sobic005G184200 Sobic004G207900 Sobic004G207900 Sobic004G025300--Sobic004G207900 Sobic004G025300--Sobic008G110500 Sobic004G025300--Sobic001G378200 Sobic004G025300--Sobic006G083100 Sobic001G451901 Sobic001G451901 Sobic004G025300--Sobic001G451901 Sobic004G025300--Sobic005G207400 Sobic001G408100 Sobic001G408100 Sobic004G025300--Sobic001G408100 Sobic001G112400--Sobic002G262200 Sobic001G112400--Sobic001G443200 Sobic001G112400--Sobic005G184200 Sobic001G112400--Sobic001G378200 Sobic004G347600 Sobic004G347600 Sobic001G112400--Sobic004G347600 Sobic001G112400--Sobic004G039400 Sobic001G112400--Sobic004G344800 Sobic002G396700 Sobic002G396700 Sobic001G112400--Sobic002G396700 Sobic001G112400--Sobic001G465400 Sobic006G094600 Sobic006G094600 Sobic001G404200--Sobic006G094600 Sobic001G404200--Sobic001G332300 Sobic007G118000 Sobic007G118000 Sobic001G404200--Sobic007G118000 Sobic001G404200--Sobic003G374000 Sobic001G404200--Sobic005G184200 Sobic001G404200--Sobic008G110500 Sobic007G014900 Sobic007G014900 Sobic001G404200--Sobic007G014900 Sobic003G148900 Sobic003G148900 Sobic001G404200--Sobic003G148900 Sobic008G145100 Sobic008G145100 Sobic001G404200--Sobic008G145100 Sobic001G428800 Sobic001G428800 Sobic001G358500--Sobic001G428800 Sobic010G192600 Sobic010G192600 Sobic001G358500--Sobic010G192600 Sobic008G018500 Sobic008G018500 Sobic001G358500--Sobic008G018500 Sobic008G085700 Sobic008G085700 Sobic001G358500--Sobic008G085700 Sobic001G467100 Sobic001G467100 Sobic001G358500--Sobic001G467100 Sobic003G182300 Sobic003G182300 Sobic001G358500--Sobic003G182300 Sobic006G039400 Sobic006G039400 Sobic001G358500--Sobic006G039400 Sobic001G049400 Sobic001G049400 Sobic001G358500--Sobic001G049400 Sobic001G211900 Sobic001G211900 Sobic001G358500--Sobic001G211900 Sobic006G083100--Sobic001G332300 Sobic007G112600 Sobic007G112600 Sobic006G083100--Sobic007G112600 Sobic006G083100--Sobic001G211900 Sobic006G083100--Sobic001G112400 Sobic006G083100--Sobic004G025300 Sobic006G083100--Sobic001G358500 Sobic006G083100--Sobic001G378200 Sobic001G099900 Sobic001G099900 Sobic006G083100--Sobic001G099900 Sobic006G142400 Sobic006G142400 Sobic006G083100--Sobic006G142400 Sobic003G374000--Sobic007G118000 Sobic009G192000 Sobic009G192000 Sobic003G374000--Sobic009G192000 Sobic010G205300 Sobic010G205300 Sobic003G374000--Sobic010G205300 Sobic002G268400 Sobic002G268400 Sobic003G374000--Sobic002G268400 Sobic001G341500 Sobic001G341500 Sobic003G374000--Sobic001G341500 Sobic007G167900 Sobic007G167900 Sobic003G374000--Sobic007G167900 Sobic003G338500 Sobic003G338500 Sobic003G374000--Sobic003G338500 Sobic003G374000--Sobic001G428800 Sobic008G137600 Sobic008G137600 Sobic003G374000--Sobic008G137600 Sobic007G105900 Sobic007G105900 Sobic002G136400--Sobic007G105900 Sobic002G136400--Sobic001G358500 Sobic002G136400--Sobic001G008100 Sobic002G136400--Sobic001G332300 Sobic009G224000 Sobic009G224000 Sobic002G136400--Sobic009G224000 Sobic009G199500 Sobic009G199500 Sobic002G136400--Sobic009G199500 Sobic002G136400--Sobic008G018500 Sobic002G136400--Sobic003G374000 Sobic006G041800 Sobic006G041800 Sobic002G136400--Sobic006G041800
Octagon: transcription factors


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