Gene annotation
Transcriptome id Sobic.002G136400.1
Synonym Sb02g012340
Functional annotation expressed protein
UniProt C5X604
Pfam -
Panther DB PTHR37242 PTHR37242:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G18400 : -
RAP-DB (Rice) LOC_Os09g39594.1 : expressed protein
MaizeGDB (Corn) Zm00025a046100
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G136400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G105900 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed -
2 Sobic.001G358500 GA20734-PA, putative, expressed -
3 Sobic.001G008100 expressed protein K17966: transmembrane protein 70, mitochondrial
4 Sobic.001G332300 expressed protein -
5 Sobic.009G224000 OsQSOXL1 quiescin-sulfhydryl oxidase-like OsQSOXL1, expressed K10758: thiol oxidase
6 Sobic.009G199500 ribosomal protein L27, putative, expressed K02899: RP-L27, MRPL27, large subunit ribosomal protein L27
7 Sobic.008G018500 expressed protein -
8 Sobic.003G374000 ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed K17618: ubiquitin-like domain-containing CTD phosphatase 1
9 Sobic.006G041800 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
10 Sobic.001G428800 vacuolar sorting protein, putative, expressed -
11 Sobic.002G276800 ER lumen protein retaining receptor, putative, expressed -
12 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
13 Sobic.001G207500 ZOS10-06 - C2H2 zinc finger protein, expressed K15685: E3 ubiquitin-protein ligase Hakai
14 Sobic.002G306100 ubiquinol-cytochrome C chaperone family protein, putative, expressed K17662: CBP3, cytochrome b pre-mRNA-processing protein 3
15 Sobic.001G387800 outer mitochondrial membrane porin, putative, expressed K11518: mitochondrial import receptor subunit TOM40
16 Sobic.007G189000 WTG1(Ortholog in rice:Wang et al. (2017))(PubMedID : 31659909)@ubiquitin thioesterase otubain-like, putative, expressed K09602: ubiquitin thioesterase protein OTUB1
17 Sobic.001G404200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17790: mitochondrial import inner membrane translocase subunit TIM22
18 Sobic.008G088824 - -
19 Sobic.001G211900 methyltransferase, putative, expressed K11437: type I protein arginine methyltransferase
20 Sobic.003G058500 expressed protein -


Gene co-expression network
sample Sobic002G136400 Sobic002G136400 Sobic007G105900 Sobic007G105900 Sobic002G136400--Sobic007G105900 Sobic001G358500 Sobic001G358500 Sobic002G136400--Sobic001G358500 Sobic001G008100 Sobic001G008100 Sobic002G136400--Sobic001G008100 Sobic001G332300 Sobic001G332300 Sobic002G136400--Sobic001G332300 Sobic009G224000 Sobic009G224000 Sobic002G136400--Sobic009G224000 Sobic009G199500 Sobic009G199500 Sobic002G136400--Sobic009G199500 Sobic008G018500 Sobic008G018500 Sobic002G136400--Sobic008G018500 Sobic003G374000 Sobic003G374000 Sobic002G136400--Sobic003G374000 Sobic006G041800 Sobic006G041800 Sobic002G136400--Sobic006G041800 Sobic001G405600 Sobic001G405600 Sobic007G105900--Sobic001G405600 Sobic001G035200 Sobic001G035200 Sobic007G105900--Sobic001G035200 Sobic007G017800 Sobic007G017800 Sobic007G105900--Sobic007G017800 Sobic007G105900--Sobic002G136400 Sobic001G207500 Sobic001G207500 Sobic007G105900--Sobic001G207500 Sobic010G059500 Sobic010G059500 Sobic007G105900--Sobic010G059500 Sobic010G034100 Sobic010G034100 Sobic007G105900--Sobic010G034100 Sobic002G131400 Sobic002G131400 Sobic007G105900--Sobic002G131400 Sobic007G189000 Sobic007G189000 Sobic007G105900--Sobic007G189000 Sobic001G428800 Sobic001G428800 Sobic001G358500--Sobic001G428800 Sobic010G192600 Sobic010G192600 Sobic001G358500--Sobic010G192600 Sobic001G358500--Sobic008G018500 Sobic008G085700 Sobic008G085700 Sobic001G358500--Sobic008G085700 Sobic001G467100 Sobic001G467100 Sobic001G358500--Sobic001G467100 Sobic003G182300 Sobic003G182300 Sobic001G358500--Sobic003G182300 Sobic006G039400 Sobic006G039400 Sobic001G358500--Sobic006G039400 Sobic001G049400 Sobic001G049400 Sobic001G358500--Sobic001G049400 Sobic001G211900 Sobic001G211900 Sobic001G358500--Sobic001G211900 Sobic004G039400 Sobic004G039400 Sobic001G008100--Sobic004G039400 Sobic001G008100--Sobic006G041800 Sobic001G465400 Sobic001G465400 Sobic001G008100--Sobic001G465400 Sobic010G040900 Sobic010G040900 Sobic001G008100--Sobic010G040900 Sobic001G387800 Sobic001G387800 Sobic001G008100--Sobic001G387800 Sobic003G276100 Sobic003G276100 Sobic001G008100--Sobic003G276100 Sobic002G079700 Sobic002G079700 Sobic001G008100--Sobic002G079700 Sobic009G191400 Sobic009G191400 Sobic001G008100--Sobic009G191400 Sobic002G276800 Sobic002G276800 Sobic001G008100--Sobic002G276800 Sobic005G184200 Sobic005G184200 Sobic001G332300--Sobic005G184200 Sobic001G378200 Sobic001G378200 Sobic001G332300--Sobic001G378200 Sobic004G025300 Sobic004G025300 Sobic001G332300--Sobic004G025300 Sobic001G112400 Sobic001G112400 Sobic001G332300--Sobic001G112400 Sobic001G404200 Sobic001G404200 Sobic001G332300--Sobic001G404200 Sobic001G332300--Sobic001G358500 Sobic006G083100 Sobic006G083100 Sobic001G332300--Sobic006G083100 Sobic001G332300--Sobic003G374000 Sobic001G332300--Sobic002G136400 Sobic003G338500 Sobic003G338500 Sobic009G224000--Sobic003G338500 Sobic010G243400 Sobic010G243400 Sobic009G224000--Sobic010G243400 Sobic007G056100 Sobic007G056100 Sobic009G224000--Sobic007G056100 Sobic002G361300 Sobic002G361300 Sobic009G224000--Sobic002G361300 Sobic004G130400 Sobic004G130400 Sobic009G224000--Sobic004G130400 Sobic010G261600 Sobic010G261600 Sobic009G224000--Sobic010G261600 Sobic003G394200 Sobic003G394200 Sobic009G224000--Sobic003G394200 Sobic003G270600 Sobic003G270600 Sobic009G224000--Sobic003G270600 Sobic008G173400 Sobic008G173400 Sobic009G224000--Sobic008G173400 Sobic007G158900 Sobic007G158900 Sobic009G199500--Sobic007G158900 Sobic009G227100 Sobic009G227100 Sobic009G199500--Sobic009G227100 Sobic003G445200 Sobic003G445200 Sobic009G199500--Sobic003G445200 Sobic002G299100 Sobic002G299100 Sobic009G199500--Sobic002G299100 Sobic009G199500--Sobic002G131400 Sobic004G122900 Sobic004G122900 Sobic009G199500--Sobic004G122900 Sobic004G084400 Sobic004G084400 Sobic009G199500--Sobic004G084400 Sobic001G043200 Sobic001G043200 Sobic009G199500--Sobic001G043200 Sobic002G398500 Sobic002G398500 Sobic009G199500--Sobic002G398500 Sobic008G018500--Sobic001G358500 Sobic002G428100 Sobic002G428100 Sobic008G018500--Sobic002G428100 Sobic007G208000 Sobic007G208000 Sobic008G018500--Sobic007G208000 Sobic003G222700 Sobic003G222700 Sobic008G018500--Sobic003G222700 Sobic004G084500 Sobic004G084500 Sobic008G018500--Sobic004G084500 Sobic001G389200 Sobic001G389200 Sobic008G018500--Sobic001G389200 Sobic008G018500--Sobic009G199500 Sobic008G018500--Sobic001G428800 Sobic008G018500--Sobic003G394200 Sobic007G118000 Sobic007G118000 Sobic003G374000--Sobic007G118000 Sobic009G192000 Sobic009G192000 Sobic003G374000--Sobic009G192000 Sobic010G205300 Sobic010G205300 Sobic003G374000--Sobic010G205300 Sobic002G268400 Sobic002G268400 Sobic003G374000--Sobic002G268400 Sobic001G341500 Sobic001G341500 Sobic003G374000--Sobic001G341500 Sobic007G167900 Sobic007G167900 Sobic003G374000--Sobic007G167900 Sobic003G374000--Sobic003G338500 Sobic003G374000--Sobic001G428800 Sobic008G137600 Sobic008G137600 Sobic003G374000--Sobic008G137600 Sobic007G119600 Sobic007G119600 Sobic006G041800--Sobic007G119600 Sobic006G041800--Sobic001G008100 Sobic006G041800--Sobic003G276100 Sobic001G485300 Sobic001G485300 Sobic006G041800--Sobic001G485300 Sobic006G041800--Sobic002G276800 Sobic007G012900 Sobic007G012900 Sobic006G041800--Sobic007G012900 Sobic003G388700 Sobic003G388700 Sobic006G041800--Sobic003G388700 Sobic006G041800--Sobic001G387800 Sobic002G255400 Sobic002G255400 Sobic006G041800--Sobic002G255400
Octagon: transcription factors


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