Gene annotation
Transcriptome id Sobic.007G105900.2
Synonym Sb07g014910
Functional annotation IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed
UniProt A0A1Z5R960
Pfam PF01521
Panther DB PTHR10072 PTHR10072:SF46
NCBI CDD KOG1119; Mitochondrial Fe-S cluster biosynthesis protein ISA2 (contains a HesB-like domain)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03905 : Iron-sulphur cluster biosynthesis family protein
RAP-DB (Rice) LOC_Os08g28230.1 : IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a029861 , Zm00025a006173
Brachypodium KQJ98049
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G105900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G405600 basic helix-loop-helix, putative, expressed K10863: aprataxin
2 Sobic.001G035200 ThiF family domain containing protein, putative, expressed K04532: NAE1, amyloid beta precursor protein binding protein 1
3 Sobic.007G017800 OsFBX142 - F-box domain containing protein, expressed -
4 Sobic.002G136400 expressed protein -
5 Sobic.001G207500 ZOS10-06 - C2H2 zinc finger protein, expressed K15685: E3 ubiquitin-protein ligase Hakai
6 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
7 Sobic.010G034100 GTP-binding protein GUF1, putative, expressed -
8 Sobic.002G131400 GPI mannosyltransferase 1, putative, expressed K05284: GPI mannosyltransferase 1 subunit M
9 Sobic.007G189000 WTG1(Ortholog in rice:Wang et al. (2017))(PubMedID : 31659909)@ubiquitin thioesterase otubain-like, putative, expressed K09602: ubiquitin thioesterase protein OTUB1
10 Sobic.003G181700 GPI mannosyltransferase 2, putative, expressed K07542: GPI mannosyltransferase 2
11 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
12 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
13 Sobic.001G014200 protein kinase domain containing protein, expressed K08829: male germ cell-associated kinase
14 Sobic.003G143200 expressed protein -
15 Sobic.004G092500 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
16 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
17 Sobic.001G358500 GA20734-PA, putative, expressed -
18 Sobic.010G068700 transporter family protein, putative, expressed K15281: solute carrier family 35
19 Sobic.009G239200 - -
20 Sobic.009G124700 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6


Gene co-expression network
sample Sobic007G105900 Sobic007G105900 Sobic001G405600 Sobic001G405600 Sobic007G105900--Sobic001G405600 Sobic001G035200 Sobic001G035200 Sobic007G105900--Sobic001G035200 Sobic007G017800 Sobic007G017800 Sobic007G105900--Sobic007G017800 Sobic002G136400 Sobic002G136400 Sobic007G105900--Sobic002G136400 Sobic001G207500 Sobic001G207500 Sobic007G105900--Sobic001G207500 Sobic010G059500 Sobic010G059500 Sobic007G105900--Sobic010G059500 Sobic010G034100 Sobic010G034100 Sobic007G105900--Sobic010G034100 Sobic002G131400 Sobic002G131400 Sobic007G105900--Sobic002G131400 Sobic007G189000 Sobic007G189000 Sobic007G105900--Sobic007G189000 Sobic001G405600--Sobic007G017800 Sobic001G405600--Sobic010G034100 Sobic001G405600--Sobic007G105900 Sobic001G405600--Sobic010G059500 Sobic003G143200 Sobic003G143200 Sobic001G405600--Sobic003G143200 Sobic006G234700 Sobic006G234700 Sobic001G405600--Sobic006G234700 Sobic006G039400 Sobic006G039400 Sobic001G405600--Sobic006G039400 Sobic003G296900 Sobic003G296900 Sobic001G405600--Sobic003G296900 Sobic001G405600--Sobic001G035200 Sobic001G035200--Sobic010G059500 Sobic001G145400 Sobic001G145400 Sobic001G035200--Sobic001G145400 Sobic010G185400 Sobic010G185400 Sobic001G035200--Sobic010G185400 Sobic006G077200 Sobic006G077200 Sobic001G035200--Sobic006G077200 Sobic001G035200--Sobic010G034100 Sobic009G084900 Sobic009G084900 Sobic001G035200--Sobic009G084900 Sobic001G155400 Sobic001G155400 Sobic001G035200--Sobic001G155400 Sobic002G371700 Sobic002G371700 Sobic001G035200--Sobic002G371700 Sobic001G087600 Sobic001G087600 Sobic001G035200--Sobic001G087600 Sobic007G017800--Sobic001G405600 Sobic002G103600 Sobic002G103600 Sobic007G017800--Sobic002G103600 Sobic007G017800--Sobic003G143200 Sobic004G185800 Sobic004G185800 Sobic007G017800--Sobic004G185800 Sobic007G017800--Sobic010G034100 Sobic008G162900 Sobic008G162900 Sobic007G017800--Sobic008G162900 Sobic009G177500 Sobic009G177500 Sobic007G017800--Sobic009G177500 Sobic007G017800--Sobic006G234700 Sobic008G063300 Sobic008G063300 Sobic007G017800--Sobic008G063300 Sobic002G136400--Sobic007G105900 Sobic001G358500 Sobic001G358500 Sobic002G136400--Sobic001G358500 Sobic001G008100 Sobic001G008100 Sobic002G136400--Sobic001G008100 Sobic001G332300 Sobic001G332300 Sobic002G136400--Sobic001G332300 Sobic009G224000 Sobic009G224000 Sobic002G136400--Sobic009G224000 Sobic009G199500 Sobic009G199500 Sobic002G136400--Sobic009G199500 Sobic008G018500 Sobic008G018500 Sobic002G136400--Sobic008G018500 Sobic003G374000 Sobic003G374000 Sobic002G136400--Sobic003G374000 Sobic006G041800 Sobic006G041800 Sobic002G136400--Sobic006G041800 Sobic001G341500 Sobic001G341500 Sobic001G207500--Sobic001G341500 Sobic003G395300 Sobic003G395300 Sobic001G207500--Sobic003G395300 Sobic001G207500--Sobic007G105900 Sobic001G207500--Sobic001G405600 Sobic007G167900 Sobic007G167900 Sobic001G207500--Sobic007G167900 Sobic003G273400 Sobic003G273400 Sobic001G207500--Sobic003G273400 Sobic001G207500--Sobic006G039400 Sobic001G207500--Sobic001G358500 Sobic002G347000 Sobic002G347000 Sobic001G207500--Sobic002G347000 Sobic010G059500--Sobic009G084900 Sobic009G131300 Sobic009G131300 Sobic010G059500--Sobic009G131300 Sobic010G059500--Sobic001G035200 Sobic004G096400 Sobic004G096400 Sobic010G059500--Sobic004G096400 Sobic010G059500--Sobic006G234700 Sobic010G059500--Sobic001G145400 Sobic010G059500--Sobic010G034100 Sobic010G059500--Sobic006G077200 Sobic001G493200 Sobic001G493200 Sobic010G059500--Sobic001G493200 Sobic010G034100--Sobic010G059500 Sobic010G034100--Sobic001G035200 Sobic009G192300 Sobic009G192300 Sobic010G034100--Sobic009G192300 Sobic010G034100--Sobic001G405600 Sobic010G034100--Sobic009G084900 Sobic001G283600 Sobic001G283600 Sobic010G034100--Sobic001G283600 Sobic001G020000 Sobic001G020000 Sobic010G034100--Sobic001G020000 Sobic006G252900 Sobic006G252900 Sobic010G034100--Sobic006G252900 Sobic002G227500 Sobic002G227500 Sobic010G034100--Sobic002G227500 Sobic004G122900 Sobic004G122900 Sobic002G131400--Sobic004G122900 Sobic001G467100 Sobic001G467100 Sobic002G131400--Sobic001G467100 Sobic002G131400--Sobic009G199500 Sobic001G211900 Sobic001G211900 Sobic002G131400--Sobic001G211900 Sobic001G099900 Sobic001G099900 Sobic002G131400--Sobic001G099900 Sobic002G364900 Sobic002G364900 Sobic002G131400--Sobic002G364900 Sobic002G131400--Sobic001G405600 Sobic002G131400--Sobic007G105900 Sobic003G181700 Sobic003G181700 Sobic002G131400--Sobic003G181700 Sobic007G056500 Sobic007G056500 Sobic007G189000--Sobic007G056500 Sobic007G189000--Sobic007G105900 Sobic009G124700 Sobic009G124700 Sobic007G189000--Sobic009G124700 Sobic001G169600 Sobic001G169600 Sobic007G189000--Sobic001G169600 Sobic001G106100 Sobic001G106100 Sobic007G189000--Sobic001G106100 Sobic007G189000--Sobic002G347000 Sobic006G219000 Sobic006G219000 Sobic007G189000--Sobic006G219000 Sobic007G189000--Sobic009G224000 Sobic009G160600 Sobic009G160600 Sobic007G189000--Sobic009G160600
Octagon: transcription factors


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