Gene annotation
Transcriptome id Sobic.009G239200.1
Synonym
Functional annotation -
UniProt A0A1B6P9X7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G216100 expressed protein -
2 Sobic.001G405600 basic helix-loop-helix, putative, expressed K10863: aprataxin
3 Sobic.008G051200 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
4 Sobic.010G140400 poor homologous synapsis 1 protein, putative, expressed -
5 Sobic.002G347000 WD domain, G-beta repeat domain containing protein, expressed K14963: WDR5, SWD3, COMPASS component SWD3
6 Sobic.007G017800 OsFBX142 - F-box domain containing protein, expressed -
7 Sobic.004G185800 expressed protein -
8 Sobic.004G171200 WD domain, G-beta repeat domain containing protein, expressed K13124: mitogen-activated protein kinase organizer 1
9 Sobic.007G105900 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed -
10 Sobic.003G012000 GTPase of unknown function domain containing protein, putative, expressed -
11 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
12 Sobic.003G143200 expressed protein -
13 Sobic.009G132700 - -
14 Sobic.006G234700 FGGY family of carbohydrate kinases, putative, expressed -
15 Sobic.002G042800 expressed protein -
16 Sobic.003G168100 BZIP protein, putative, expressed -
17 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
18 Sobic.001G276200 ACI13, putative, expressed -
19 Sobic.006G252900 ubiquitin family protein, putative, expressed -
20 Sobic.010G034100 GTP-binding protein GUF1, putative, expressed -


Gene co-expression network
sample Sobic009G239200 Sobic009G239200 Sobic006G216100 Sobic006G216100 Sobic009G239200--Sobic006G216100 Sobic001G405600 Sobic001G405600 Sobic009G239200--Sobic001G405600 Sobic008G051200 Sobic008G051200 Sobic009G239200--Sobic008G051200 Sobic010G140400 Sobic010G140400 Sobic009G239200--Sobic010G140400 Sobic002G347000 Sobic002G347000 Sobic009G239200--Sobic002G347000 Sobic007G017800 Sobic007G017800 Sobic009G239200--Sobic007G017800 Sobic004G185800 Sobic004G185800 Sobic009G239200--Sobic004G185800 Sobic004G171200 Sobic004G171200 Sobic009G239200--Sobic004G171200 Sobic007G105900 Sobic007G105900 Sobic009G239200--Sobic007G105900 Sobic004G034800 Sobic004G034800 Sobic006G216100--Sobic004G034800 Sobic002G042800 Sobic002G042800 Sobic006G216100--Sobic002G042800 Sobic003G168100 Sobic003G168100 Sobic006G216100--Sobic003G168100 Sobic001G455600 Sobic001G455600 Sobic006G216100--Sobic001G455600 Sobic006G252900 Sobic006G252900 Sobic006G216100--Sobic006G252900 Sobic009G132700 Sobic009G132700 Sobic006G216100--Sobic009G132700 Sobic007G031900 Sobic007G031900 Sobic006G216100--Sobic007G031900 Sobic003G398700 Sobic003G398700 Sobic006G216100--Sobic003G398700 Sobic004G244900 Sobic004G244900 Sobic006G216100--Sobic004G244900 Sobic001G405600--Sobic007G017800 Sobic010G034100 Sobic010G034100 Sobic001G405600--Sobic010G034100 Sobic001G405600--Sobic007G105900 Sobic010G059500 Sobic010G059500 Sobic001G405600--Sobic010G059500 Sobic003G143200 Sobic003G143200 Sobic001G405600--Sobic003G143200 Sobic006G234700 Sobic006G234700 Sobic001G405600--Sobic006G234700 Sobic006G039400 Sobic006G039400 Sobic001G405600--Sobic006G039400 Sobic003G296900 Sobic003G296900 Sobic001G405600--Sobic003G296900 Sobic001G035200 Sobic001G035200 Sobic001G405600--Sobic001G035200 Sobic008G051200--Sobic004G171200 Sobic001G251100 Sobic001G251100 Sobic008G051200--Sobic001G251100 Sobic006G125900 Sobic006G125900 Sobic008G051200--Sobic006G125900 Sobic008G051200--Sobic004G185800 Sobic001G493200 Sobic001G493200 Sobic008G051200--Sobic001G493200 Sobic001G089600 Sobic001G089600 Sobic008G051200--Sobic001G089600 Sobic001G453400 Sobic001G453400 Sobic008G051200--Sobic001G453400 Sobic001G393900 Sobic001G393900 Sobic008G051200--Sobic001G393900 Sobic004G030800 Sobic004G030800 Sobic008G051200--Sobic004G030800 Sobic010G145800 Sobic010G145800 Sobic010G140400--Sobic010G145800 Sobic010G140400--Sobic001G493200 Sobic001G219600 Sobic001G219600 Sobic010G140400--Sobic001G219600 Sobic010G140400--Sobic006G234700 Sobic007G203200 Sobic007G203200 Sobic010G140400--Sobic007G203200 Sobic003G443100 Sobic003G443100 Sobic010G140400--Sobic003G443100 Sobic008G162900 Sobic008G162900 Sobic010G140400--Sobic008G162900 Sobic010G279450 Sobic010G279450 Sobic010G140400--Sobic010G279450 Sobic001G227200 Sobic001G227200 Sobic010G140400--Sobic001G227200 Sobic002G347000--Sobic003G143200 Sobic005G160400 Sobic005G160400 Sobic002G347000--Sobic005G160400 Sobic001G309400 Sobic001G309400 Sobic002G347000--Sobic001G309400 Sobic006G180000 Sobic006G180000 Sobic002G347000--Sobic006G180000 Sobic007G115200 Sobic007G115200 Sobic002G347000--Sobic007G115200 Sobic006G199200 Sobic006G199200 Sobic002G347000--Sobic006G199200 Sobic007G167900 Sobic007G167900 Sobic002G347000--Sobic007G167900 Sobic001G281600 Sobic001G281600 Sobic002G347000--Sobic001G281600 Sobic008G076800 Sobic008G076800 Sobic002G347000--Sobic008G076800 Sobic007G017800--Sobic001G405600 Sobic002G103600 Sobic002G103600 Sobic007G017800--Sobic002G103600 Sobic007G017800--Sobic003G143200 Sobic007G017800--Sobic004G185800 Sobic007G017800--Sobic010G034100 Sobic007G017800--Sobic008G162900 Sobic009G177500 Sobic009G177500 Sobic007G017800--Sobic009G177500 Sobic007G017800--Sobic006G234700 Sobic008G063300 Sobic008G063300 Sobic007G017800--Sobic008G063300 Sobic006G041600 Sobic006G041600 Sobic004G185800--Sobic006G041600 Sobic001G433800 Sobic001G433800 Sobic004G185800--Sobic001G433800 Sobic004G185800--Sobic003G398700 Sobic003G188400 Sobic003G188400 Sobic004G185800--Sobic003G188400 Sobic004G185800--Sobic008G063300 Sobic006G096900 Sobic006G096900 Sobic004G185800--Sobic006G096900 Sobic004G185800--Sobic006G252900 Sobic004G185800--Sobic003G168100 Sobic002G425500 Sobic002G425500 Sobic004G185800--Sobic002G425500 Sobic004G171200--Sobic008G051200 Sobic002G298100 Sobic002G298100 Sobic004G171200--Sobic002G298100 Sobic001G434200 Sobic001G434200 Sobic004G171200--Sobic001G434200 Sobic004G171200--Sobic010G059500 Sobic004G171200--Sobic001G493200 Sobic001G120500 Sobic001G120500 Sobic004G171200--Sobic001G120500 Sobic004G171200--Sobic009G239200 Sobic006G155100 Sobic006G155100 Sobic004G171200--Sobic006G155100 Sobic007G097400 Sobic007G097400 Sobic004G171200--Sobic007G097400 Sobic007G105900--Sobic001G405600 Sobic007G105900--Sobic001G035200 Sobic007G105900--Sobic007G017800 Sobic002G136400 Sobic002G136400 Sobic007G105900--Sobic002G136400 Sobic001G207500 Sobic001G207500 Sobic007G105900--Sobic001G207500 Sobic007G105900--Sobic010G059500 Sobic007G105900--Sobic010G034100 Sobic002G131400 Sobic002G131400 Sobic007G105900--Sobic002G131400 Sobic007G189000 Sobic007G189000 Sobic007G105900--Sobic007G189000
Octagon: transcription factors


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