Gene annotation
Transcriptome id Sobic.010G034100.1
Synonym Sb10g003070
Functional annotation GTP-binding protein GUF1, putative, expressed
UniProt C5Z3W1
Pfam PF01926 PF00679 PF06421
Panther DB PTHR23115 PTHR23115:SF97
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT5G39900 : Small GTP-binding protein
RAP-DB (Rice) LOC_Os06g05250.2 : GTP-binding protein GUF1, putative, expressed
MaizeGDB (Corn) Zm00025a031213 , Zm00025a050051 , Zm00025a030948
Brachypodium KQK19907 , KQK19918
Barley HORVU7Hr1G019550.11 , HORVU7Hr1G019550.10 , HORVU7Hr1G019550.1 , HORVU7Hr1G019550.3 , HORVU7Hr1G019550.2 , HORVU7Hr1G019550.5 , HORVU7Hr1G019550.4 , HORVU7Hr1G019550.7 , HORVU7Hr1G019550.6 , HORVU7Hr1G019550.9 , HORVU7Hr1G019550.8
Wheat TraesCS7D02G081700 , TraesCS4A02G386100 , TraesCS4A02G386100 , TraesCS4A02G386100 , TraesCS7D02G081700 , TraesCS7D02G081700 , TraesCS7A02G087200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
2 Sobic.001G035200 ThiF family domain containing protein, putative, expressed K04532: NAE1, amyloid beta precursor protein binding protein 1
3 Sobic.009G192300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
4 Sobic.001G405600 basic helix-loop-helix, putative, expressed K10863: aprataxin
5 Sobic.009G084900 expressed protein -
6 Sobic.001G283600 NTMC2Type1.2 protein, putative, expressed -
7 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
8 Sobic.006G252900 ubiquitin family protein, putative, expressed -
9 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
10 Sobic.006G234700 FGGY family of carbohydrate kinases, putative, expressed -
11 Sobic.007G017800 OsFBX142 - F-box domain containing protein, expressed -
12 Sobic.003G241700 SET domain containing protein, expressed -
13 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
14 Sobic.001G087600 ZOS9-03 - C2H2 zinc finger protein, expressed -
15 Sobic.008G140700 RNA recognition motif containing protein, putative, expressed -
16 Sobic.010G185400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
17 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
18 Sobic.004G240400 tRNA synthetase, putative, expressed -
19 Sobic.003G120300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
20 Sobic.001G155400 initiation factor 2 subunit family domain containing protein, expressed K03680: translation initiation factor eIF-2B subunit delta


Gene co-expression network
sample Sobic010G034100 Sobic010G034100 Sobic010G059500 Sobic010G059500 Sobic010G034100--Sobic010G059500 Sobic001G035200 Sobic001G035200 Sobic010G034100--Sobic001G035200 Sobic009G192300 Sobic009G192300 Sobic010G034100--Sobic009G192300 Sobic001G405600 Sobic001G405600 Sobic010G034100--Sobic001G405600 Sobic009G084900 Sobic009G084900 Sobic010G034100--Sobic009G084900 Sobic001G283600 Sobic001G283600 Sobic010G034100--Sobic001G283600 Sobic001G020000 Sobic001G020000 Sobic010G034100--Sobic001G020000 Sobic006G252900 Sobic006G252900 Sobic010G034100--Sobic006G252900 Sobic002G227500 Sobic002G227500 Sobic010G034100--Sobic002G227500 Sobic010G059500--Sobic009G084900 Sobic009G131300 Sobic009G131300 Sobic010G059500--Sobic009G131300 Sobic010G059500--Sobic001G035200 Sobic004G096400 Sobic004G096400 Sobic010G059500--Sobic004G096400 Sobic006G234700 Sobic006G234700 Sobic010G059500--Sobic006G234700 Sobic001G145400 Sobic001G145400 Sobic010G059500--Sobic001G145400 Sobic010G059500--Sobic010G034100 Sobic006G077200 Sobic006G077200 Sobic010G059500--Sobic006G077200 Sobic001G493200 Sobic001G493200 Sobic010G059500--Sobic001G493200 Sobic001G035200--Sobic010G059500 Sobic001G035200--Sobic001G145400 Sobic010G185400 Sobic010G185400 Sobic001G035200--Sobic010G185400 Sobic001G035200--Sobic006G077200 Sobic001G035200--Sobic010G034100 Sobic001G035200--Sobic009G084900 Sobic001G155400 Sobic001G155400 Sobic001G035200--Sobic001G155400 Sobic002G371700 Sobic002G371700 Sobic001G035200--Sobic002G371700 Sobic001G087600 Sobic001G087600 Sobic001G035200--Sobic001G087600 Sobic009G192300--Sobic004G096400 Sobic009G192300--Sobic006G234700 Sobic009G192300--Sobic010G059500 Sobic009G192300--Sobic010G034100 Sobic009G192300--Sobic009G084900 Sobic003G444800 Sobic003G444800 Sobic009G192300--Sobic003G444800 Sobic002G260400 Sobic002G260400 Sobic009G192300--Sobic002G260400 SobicK028600 SobicK028600 Sobic009G192300--SobicK028600 Sobic007G125000 Sobic007G125000 Sobic009G192300--Sobic007G125000 Sobic007G017800 Sobic007G017800 Sobic001G405600--Sobic007G017800 Sobic001G405600--Sobic010G034100 Sobic007G105900 Sobic007G105900 Sobic001G405600--Sobic007G105900 Sobic001G405600--Sobic010G059500 Sobic003G143200 Sobic003G143200 Sobic001G405600--Sobic003G143200 Sobic001G405600--Sobic006G234700 Sobic006G039400 Sobic006G039400 Sobic001G405600--Sobic006G039400 Sobic003G296900 Sobic003G296900 Sobic001G405600--Sobic003G296900 Sobic001G405600--Sobic001G035200 Sobic009G084900--Sobic010G059500 Sobic003G072200 Sobic003G072200 Sobic009G084900--Sobic003G072200 Sobic009G084900--Sobic001G493200 Sobic001G433800 Sobic001G433800 Sobic009G084900--Sobic001G433800 Sobic009G084900--Sobic009G131300 Sobic002G133300 Sobic002G133300 Sobic009G084900--Sobic002G133300 Sobic009G084900--Sobic006G077200 Sobic008G082500 Sobic008G082500 Sobic009G084900--Sobic008G082500 Sobic004G260100 Sobic004G260100 Sobic009G084900--Sobic004G260100 Sobic007G162100 Sobic007G162100 Sobic001G283600--Sobic007G162100 Sobic001G283600--Sobic010G034100 Sobic008G048300 Sobic008G048300 Sobic001G283600--Sobic008G048300 Sobic002G170200 Sobic002G170200 Sobic001G283600--Sobic002G170200 Sobic006G127600 Sobic006G127600 Sobic001G283600--Sobic006G127600 Sobic001G283600--Sobic006G039400 Sobic008G033500 Sobic008G033500 Sobic001G283600--Sobic008G033500 Sobic006G093300 Sobic006G093300 Sobic001G283600--Sobic006G093300 Sobic001G283600--Sobic008G082500 Sobic001G219600 Sobic001G219600 Sobic001G020000--Sobic001G219600 Sobic001G020000--Sobic001G433800 Sobic002G317200 Sobic002G317200 Sobic001G020000--Sobic002G317200 Sobic001G354600 Sobic001G354600 Sobic001G020000--Sobic001G354600 Sobic001G020000--Sobic001G087600 Sobic002G425500 Sobic002G425500 Sobic001G020000--Sobic002G425500 Sobic003G095900 Sobic003G095900 Sobic001G020000--Sobic003G095900 Sobic001G352900 Sobic001G352900 Sobic001G020000--Sobic001G352900 Sobic004G124300 Sobic004G124300 Sobic001G020000--Sobic004G124300 Sobic006G252900--Sobic001G433800 Sobic006G041600 Sobic006G041600 Sobic006G252900--Sobic006G041600 Sobic001G363500 Sobic001G363500 Sobic006G252900--Sobic001G363500 Sobic001G441400 Sobic001G441400 Sobic006G252900--Sobic001G441400 Sobic009G256400 Sobic009G256400 Sobic006G252900--Sobic009G256400 Sobic006G096900 Sobic006G096900 Sobic006G252900--Sobic006G096900 Sobic005G112300 Sobic005G112300 Sobic006G252900--Sobic005G112300 Sobic005G027400 Sobic005G027400 Sobic006G252900--Sobic005G027400 Sobic009G177500 Sobic009G177500 Sobic006G252900--Sobic009G177500 Sobic001G308400 Sobic001G308400 Sobic002G227500--Sobic001G308400 Sobic003G021600 Sobic003G021600 Sobic002G227500--Sobic003G021600 Sobic001G156900 Sobic001G156900 Sobic002G227500--Sobic001G156900 Sobic010G169900 Sobic010G169900 Sobic002G227500--Sobic010G169900 Sobic004G265500 Sobic004G265500 Sobic002G227500--Sobic004G265500 Sobic003G043000 Sobic003G043000 Sobic002G227500--Sobic003G043000 Sobic003G405500 Sobic003G405500 Sobic002G227500--Sobic003G405500 Sobic003G181700 Sobic003G181700 Sobic002G227500--Sobic003G181700 Sobic002G227500--Sobic010G059500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.