Gene annotation
Transcriptome id Sobic.003G120300.5,Sobic.003G120300.2,Sobic.003G120300.3,Sobic.003G120300.6,Sobic.003G120300.4,Sobic.003G120300.1
Synonym Sb03g010160
Functional annotation NAD dependent epimerase/dehydratase family protein, putative, expressed
UniProt A0A1W0VWZ7 , A0A1W0VX04 , C5XGG5 , A0A1W0VX02
Pfam -
Panther DB PTHR10366 PTHR10366:SF430
NCBI CDD KOG1430; C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19690 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os01g15660.1 : NAD dependent epimerase/dehydratase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a024053
Brachypodium KQK03736 , KQK03735
Barley -
Wheat TraesCS3B02G208600 , TraesCS3D02G184100 , TraesCS3A02G176400
Populus -


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cDNA sequences
Sobic.003G120300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G424900 MAG2, putative, expressed -
2 Sobic.009G129100 preprotein translocase subunit secY, putative, expressed -
3 Sobic.006G216100 expressed protein -
4 Sobic.001G455600 cysteine synthase, putative, expressed K01738: cysteine synthase
5 Sobic.010G034100 GTP-binding protein GUF1, putative, expressed -
6 Sobic.009G107300 3\'-5\' exonuclease, putative, expressed -
7 Sobic.007G017800 OsFBX142 - F-box domain containing protein, expressed -
8 Sobic.002G042800 expressed protein -
9 Sobic.002G425500 ATPOT1, putative, expressed -
10 Sobic.001G155400 initiation factor 2 subunit family domain containing protein, expressed K03680: translation initiation factor eIF-2B subunit delta
11 Sobic.006G128300 DUF565 domain containing protein, putative, expressed -
12 Sobic.005G167700 protein phosphatase 2C, putative, expressed -
13 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
14 Sobic.010G140400 poor homologous synapsis 1 protein, putative, expressed -
15 Sobic.009G192300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
16 Sobic.010G204900 formamidopyrimidine-DNA glycosylase, putative, expressed K10563: mutM, formamidopyrimidine-DNA glycosylase
17 Sobic.010G145800 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
18 Sobic.002G170200 zinc finger family protein, putative, expressed -
19 Sobic.001G227200 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K00861: RFK, riboflavin kinase
20 Sobic.004G185800 expressed protein -


Gene co-expression network
sample Sobic003G120300 Sobic003G120300 Sobic002G424900 Sobic002G424900 Sobic003G120300--Sobic002G424900 Sobic009G129100 Sobic009G129100 Sobic003G120300--Sobic009G129100 Sobic006G216100 Sobic006G216100 Sobic003G120300--Sobic006G216100 Sobic001G455600 Sobic001G455600 Sobic003G120300--Sobic001G455600 Sobic010G034100 Sobic010G034100 Sobic003G120300--Sobic010G034100 Sobic009G107300 Sobic009G107300 Sobic003G120300--Sobic009G107300 Sobic007G017800 Sobic007G017800 Sobic003G120300--Sobic007G017800 Sobic002G042800 Sobic002G042800 Sobic003G120300--Sobic002G042800 Sobic002G425500 Sobic002G425500 Sobic003G120300--Sobic002G425500 Sobic002G424900--Sobic003G120300 Sobic002G296100 Sobic002G296100 Sobic002G424900--Sobic002G296100 Sobic002G170200 Sobic002G170200 Sobic002G424900--Sobic002G170200 Sobic002G424900--Sobic002G425500 Sobic010G145800 Sobic010G145800 Sobic002G424900--Sobic010G145800 Sobic002G347600 Sobic002G347600 Sobic002G424900--Sobic002G347600 Sobic001G155400 Sobic001G155400 Sobic002G424900--Sobic001G155400 Sobic001G002600 Sobic001G002600 Sobic002G424900--Sobic001G002600 Sobic004G235300 Sobic004G235300 Sobic002G424900--Sobic004G235300 Sobic003G168100 Sobic003G168100 Sobic009G129100--Sobic003G168100 Sobic005G167700 Sobic005G167700 Sobic009G129100--Sobic005G167700 Sobic003G067100 Sobic003G067100 Sobic009G129100--Sobic003G067100 Sobic010G126000 Sobic010G126000 Sobic009G129100--Sobic010G126000 Sobic003G234900 Sobic003G234900 Sobic009G129100--Sobic003G234900 Sobic009G129100--Sobic003G120300 Sobic001G275300 Sobic001G275300 Sobic009G129100--Sobic001G275300 Sobic004G185800 Sobic004G185800 Sobic009G129100--Sobic004G185800 Sobic009G132700 Sobic009G132700 Sobic009G129100--Sobic009G132700 Sobic004G034800 Sobic004G034800 Sobic006G216100--Sobic004G034800 Sobic006G216100--Sobic002G042800 Sobic006G216100--Sobic003G168100 Sobic006G216100--Sobic001G455600 Sobic006G252900 Sobic006G252900 Sobic006G216100--Sobic006G252900 Sobic006G216100--Sobic009G132700 Sobic007G031900 Sobic007G031900 Sobic006G216100--Sobic007G031900 Sobic003G398700 Sobic003G398700 Sobic006G216100--Sobic003G398700 Sobic004G244900 Sobic004G244900 Sobic006G216100--Sobic004G244900 Sobic004G140600 Sobic004G140600 Sobic001G455600--Sobic004G140600 Sobic001G455600--Sobic009G132700 Sobic009G185700 Sobic009G185700 Sobic001G455600--Sobic009G185700 Sobic004G134200 Sobic004G134200 Sobic001G455600--Sobic004G134200 Sobic010G139000 Sobic010G139000 Sobic001G455600--Sobic010G139000 Sobic001G455600--Sobic006G216100 Sobic001G456900 Sobic001G456900 Sobic001G455600--Sobic001G456900 Sobic003G441900 Sobic003G441900 Sobic001G455600--Sobic003G441900 Sobic008G044100 Sobic008G044100 Sobic001G455600--Sobic008G044100 Sobic010G059500 Sobic010G059500 Sobic010G034100--Sobic010G059500 Sobic001G035200 Sobic001G035200 Sobic010G034100--Sobic001G035200 Sobic009G192300 Sobic009G192300 Sobic010G034100--Sobic009G192300 Sobic001G405600 Sobic001G405600 Sobic010G034100--Sobic001G405600 Sobic009G084900 Sobic009G084900 Sobic010G034100--Sobic009G084900 Sobic001G283600 Sobic001G283600 Sobic010G034100--Sobic001G283600 Sobic001G020000 Sobic001G020000 Sobic010G034100--Sobic001G020000 Sobic010G034100--Sobic006G252900 Sobic002G227500 Sobic002G227500 Sobic010G034100--Sobic002G227500 Sobic009G228000 Sobic009G228000 Sobic009G107300--Sobic009G228000 Sobic007G087000 Sobic007G087000 Sobic009G107300--Sobic007G087000 Sobic004G240400 Sobic004G240400 Sobic009G107300--Sobic004G240400 Sobic008G116700 Sobic008G116700 Sobic009G107300--Sobic008G116700 Sobic003G043000 Sobic003G043000 Sobic009G107300--Sobic003G043000 Sobic004G198600 Sobic004G198600 Sobic009G107300--Sobic004G198600 Sobic009G107300--Sobic003G120300 Sobic003G181700 Sobic003G181700 Sobic009G107300--Sobic003G181700 Sobic001G156900 Sobic001G156900 Sobic009G107300--Sobic001G156900 Sobic007G017800--Sobic001G405600 Sobic002G103600 Sobic002G103600 Sobic007G017800--Sobic002G103600 Sobic003G143200 Sobic003G143200 Sobic007G017800--Sobic003G143200 Sobic007G017800--Sobic004G185800 Sobic007G017800--Sobic010G034100 Sobic008G162900 Sobic008G162900 Sobic007G017800--Sobic008G162900 Sobic009G177500 Sobic009G177500 Sobic007G017800--Sobic009G177500 Sobic006G234700 Sobic006G234700 Sobic007G017800--Sobic006G234700 Sobic008G063300 Sobic008G063300 Sobic007G017800--Sobic008G063300 Sobic008G028700 Sobic008G028700 Sobic002G042800--Sobic008G028700 Sobic002G042800--Sobic001G456900 Sobic002G042800--Sobic006G216100 Sobic002G408200 Sobic002G408200 Sobic002G042800--Sobic002G408200 Sobic001G094600 Sobic001G094600 Sobic002G042800--Sobic001G094600 Sobic010G243900 Sobic010G243900 Sobic002G042800--Sobic010G243900 Sobic010G279450 Sobic010G279450 Sobic002G042800--Sobic010G279450 Sobic008G113100 Sobic008G113100 Sobic002G042800--Sobic008G113100 Sobic002G042800--Sobic002G103600 Sobic002G425500--Sobic001G020000 Sobic002G425500--Sobic001G155400 Sobic003G188400 Sobic003G188400 Sobic002G425500--Sobic003G188400 Sobic004G107200 Sobic004G107200 Sobic002G425500--Sobic004G107200 Sobic007G183900 Sobic007G183900 Sobic002G425500--Sobic007G183900 Sobic002G425500--Sobic004G185800 Sobic001G227200 Sobic001G227200 Sobic002G425500--Sobic001G227200 Sobic008G002500 Sobic008G002500 Sobic002G425500--Sobic008G002500 Sobic004G155600 Sobic004G155600 Sobic002G425500--Sobic004G155600
Octagon: transcription factors


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