Gene annotation
Transcriptome id Sobic.007G189000.2,Sobic.007G189000.1
Synonym Sb07g025870
Functional annotation WTG1(Ortholog in rice:Wang et al. (2017)) (PubMedID : 31659909)
ubiquitin thioesterase otubain-like, putative, expressed
UniProt C5YHM5
Pfam PF10275
Panther DB PTHR12931
NCBI CDD KOG3991; Uncharacterized conserved protein
KEGG Orthology K09602; ubiquitin thioesterase protein OTUB1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28120 : -
RAP-DB (Rice) LOC_Os08g42540.1 : ubiquitin thioesterase otubain-like, putative, expressed
MaizeGDB (Corn) Zm00025a030473
Brachypodium PNT68505 , PNT68507 , PNT68506 , PNT68508
Barley HORVU7Hr1G055280.5 , HORVU7Hr1G055280.7 , HORVU7Hr1G055280.6 , HORVU7Hr1G055280.1 , HORVU7Hr1G055280.3 , HORVU7Hr1G055280.2
Wheat TraesCS7B02G161900 , TraesCS7B02G161900 , TraesCS7D02G264800 , TraesCS7D02G264800 , TraesCS7A02G263900 , TraesCS7A02G263900
Populus -


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cDNA sequences
Sobic.007G189000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G056500 cullin, putative, expressed K03869: cullin 3
2 Sobic.007G105900 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed -
3 Sobic.009G124700 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
4 Sobic.001G169600 F-box-like/WD repeat-containing protein TBL1XR1-A, putative, expressed -
5 Sobic.001G106100 expressed protein -
6 Sobic.002G347000 WD domain, G-beta repeat domain containing protein, expressed K14963: WDR5, SWD3, COMPASS component SWD3
7 Sobic.006G219000 OsFBW1 - F-box domain and WD40 repeat containing protein, expressed -
8 Sobic.009G224000 OsQSOXL1 quiescin-sulfhydryl oxidase-like OsQSOXL1, expressed K10758: thiol oxidase
9 Sobic.009G160600 Yip1 domain containing protein, expressed -
10 Sobic.007G167900 signal peptide peptidase domain containing protein, expressed K09598: signal peptide peptidase-like 3
11 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
12 Sobic.003G074400 expressed protein -
13 Sobic.001G207500 ZOS10-06 - C2H2 zinc finger protein, expressed K15685: E3 ubiquitin-protein ligase Hakai
14 Sobic.001G035200 ThiF family domain containing protein, putative, expressed K04532: NAE1, amyloid beta precursor protein binding protein 1
15 Sobic.009G083200 coiled-coil domain-containing protein 25, putative, expressed -
16 Sobic.009G192000 transcription initiation factor IIF beta subunit, putative, expressed K03139: TFIIF2, GTF2F2, transcription initiation factor TFIIF subunit beta
17 Sobic.003G374000 ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed K17618: ubiquitin-like domain-containing CTD phosphatase 1
18 Sobic.003G352200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.007G075900 SKP1, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
20 Sobic.001G114500 ATP binding protein, putative, expressed K06883: uncharacterized protein


Gene co-expression network
sample Sobic007G189000 Sobic007G189000 Sobic007G056500 Sobic007G056500 Sobic007G189000--Sobic007G056500 Sobic007G105900 Sobic007G105900 Sobic007G189000--Sobic007G105900 Sobic009G124700 Sobic009G124700 Sobic007G189000--Sobic009G124700 Sobic001G169600 Sobic001G169600 Sobic007G189000--Sobic001G169600 Sobic001G106100 Sobic001G106100 Sobic007G189000--Sobic001G106100 Sobic002G347000 Sobic002G347000 Sobic007G189000--Sobic002G347000 Sobic006G219000 Sobic006G219000 Sobic007G189000--Sobic006G219000 Sobic009G224000 Sobic009G224000 Sobic007G189000--Sobic009G224000 Sobic009G160600 Sobic009G160600 Sobic007G189000--Sobic009G160600 Sobic006G186400 Sobic006G186400 Sobic007G056500--Sobic006G186400 Sobic002G034600 Sobic002G034600 Sobic007G056500--Sobic002G034600 Sobic001G042200 Sobic001G042200 Sobic007G056500--Sobic001G042200 Sobic010G077500 Sobic010G077500 Sobic007G056500--Sobic010G077500 Sobic010G095700 Sobic010G095700 Sobic007G056500--Sobic010G095700 Sobic004G180900 Sobic004G180900 Sobic007G056500--Sobic004G180900 Sobic001G395100 Sobic001G395100 Sobic007G056500--Sobic001G395100 Sobic001G066300 Sobic001G066300 Sobic007G056500--Sobic001G066300 Sobic006G121300 Sobic006G121300 Sobic007G056500--Sobic006G121300 Sobic001G405600 Sobic001G405600 Sobic007G105900--Sobic001G405600 Sobic001G035200 Sobic001G035200 Sobic007G105900--Sobic001G035200 Sobic007G017800 Sobic007G017800 Sobic007G105900--Sobic007G017800 Sobic002G136400 Sobic002G136400 Sobic007G105900--Sobic002G136400 Sobic001G207500 Sobic001G207500 Sobic007G105900--Sobic001G207500 Sobic010G059500 Sobic010G059500 Sobic007G105900--Sobic010G059500 Sobic010G034100 Sobic010G034100 Sobic007G105900--Sobic010G034100 Sobic002G131400 Sobic002G131400 Sobic007G105900--Sobic002G131400 Sobic007G105900--Sobic007G189000 Sobic007G218000 Sobic007G218000 Sobic009G124700--Sobic007G218000 Sobic009G044800 Sobic009G044800 Sobic009G124700--Sobic009G044800 Sobic003G443100 Sobic003G443100 Sobic009G124700--Sobic003G443100 Sobic009G177500 Sobic009G177500 Sobic009G124700--Sobic009G177500 Sobic007G075900 Sobic007G075900 Sobic009G124700--Sobic007G075900 Sobic003G118200 Sobic003G118200 Sobic009G124700--Sobic003G118200 Sobic001G441400 Sobic001G441400 Sobic009G124700--Sobic001G441400 Sobic007G132100 Sobic007G132100 Sobic009G124700--Sobic007G132100 Sobic005G138300 Sobic005G138300 Sobic009G124700--Sobic005G138300 Sobic001G169600--Sobic009G124700 Sobic001G169600--Sobic007G017800 Sobic001G169600--Sobic007G075900 Sobic001G169600--Sobic007G189000 Sobic001G169600--Sobic001G405600 Sobic004G111700 Sobic004G111700 Sobic001G169600--Sobic004G111700 Sobic003G143200 Sobic003G143200 Sobic001G169600--Sobic003G143200 Sobic008G063300 Sobic008G063300 Sobic001G169600--Sobic008G063300 Sobic005G160400 Sobic005G160400 Sobic001G169600--Sobic005G160400 Sobic006G215900 Sobic006G215900 Sobic001G106100--Sobic006G215900 Sobic008G173400 Sobic008G173400 Sobic001G106100--Sobic008G173400 Sobic001G106100--Sobic001G042200 Sobic008G058800 Sobic008G058800 Sobic001G106100--Sobic008G058800 Sobic004G246100 Sobic004G246100 Sobic001G106100--Sobic004G246100 Sobic002G197100 Sobic002G197100 Sobic001G106100--Sobic002G197100 Sobic003G074400 Sobic003G074400 Sobic001G106100--Sobic003G074400 Sobic001G106100--Sobic007G056500 Sobic001G106100--Sobic007G189000 Sobic002G347000--Sobic003G143200 Sobic002G347000--Sobic005G160400 Sobic001G309400 Sobic001G309400 Sobic002G347000--Sobic001G309400 Sobic006G180000 Sobic006G180000 Sobic002G347000--Sobic006G180000 Sobic007G115200 Sobic007G115200 Sobic002G347000--Sobic007G115200 Sobic006G199200 Sobic006G199200 Sobic002G347000--Sobic006G199200 Sobic007G167900 Sobic007G167900 Sobic002G347000--Sobic007G167900 Sobic001G281600 Sobic001G281600 Sobic002G347000--Sobic001G281600 Sobic008G076800 Sobic008G076800 Sobic002G347000--Sobic008G076800 Sobic003G121300 Sobic003G121300 Sobic006G219000--Sobic003G121300 Sobic009G207200 Sobic009G207200 Sobic006G219000--Sobic009G207200 Sobic006G219000--Sobic007G189000 Sobic001G484700 Sobic001G484700 Sobic006G219000--Sobic001G484700 Sobic001G507400 Sobic001G507400 Sobic006G219000--Sobic001G507400 Sobic001G294300 Sobic001G294300 Sobic006G219000--Sobic001G294300 Sobic001G216100 Sobic001G216100 Sobic006G219000--Sobic001G216100 Sobic010G068700 Sobic010G068700 Sobic006G219000--Sobic010G068700 Sobic006G219000--Sobic006G121300 Sobic003G338500 Sobic003G338500 Sobic009G224000--Sobic003G338500 Sobic010G243400 Sobic010G243400 Sobic009G224000--Sobic010G243400 Sobic007G056100 Sobic007G056100 Sobic009G224000--Sobic007G056100 Sobic002G361300 Sobic002G361300 Sobic009G224000--Sobic002G361300 Sobic004G130400 Sobic004G130400 Sobic009G224000--Sobic004G130400 Sobic010G261600 Sobic010G261600 Sobic009G224000--Sobic010G261600 Sobic003G394200 Sobic003G394200 Sobic009G224000--Sobic003G394200 Sobic003G270600 Sobic003G270600 Sobic009G224000--Sobic003G270600 Sobic009G224000--Sobic008G173400 Sobic001G005600 Sobic001G005600 Sobic009G160600--Sobic001G005600 Sobic001G161900 Sobic001G161900 Sobic009G160600--Sobic001G161900 Sobic003G382900 Sobic003G382900 Sobic009G160600--Sobic003G382900 Sobic004G323700 Sobic004G323700 Sobic009G160600--Sobic004G323700 Sobic003G005200 Sobic003G005200 Sobic009G160600--Sobic003G005200 Sobic003G150900 Sobic003G150900 Sobic009G160600--Sobic003G150900 Sobic010G129600 Sobic010G129600 Sobic009G160600--Sobic010G129600 Sobic009G160600--Sobic007G056500 Sobic009G160600--Sobic001G042200
Octagon: transcription factors


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