Gene annotation
Transcriptome id Sobic.009G083200.1
Synonym Sb09g007310
Functional annotation coiled-coil domain-containing protein 25, putative, expressed
UniProt C5YV38
Pfam PF05670
Panther DB PTHR13049
NCBI CDD KOG3272; Predicted coiled-coil protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11500 : -
RAP-DB (Rice) LOC_Os05g13440.1 : coiled-coil domain-containing protein 25, putative, expressed
MaizeGDB (Corn) Zm00025a037578 , Zm00025a044089 , Zm00025a005202 , Zm00025a052025 , Zm00025a056881 , Zm00025a008408
Brachypodium KQK07000
Barley HORVU1Hr1G030030.4 , HORVU1Hr1G030030.2
Wheat TraesCS1A02G127000 , TraesCS1B02G147600
Populus -


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cDNA sequences
Sobic.009G083200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G225300 expressed protein -
2 Sobic.010G193800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
3 Sobic.004G226800 expressed protein -
4 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.009G058500 phosphatidylinositolglycan-related, putative, expressed K03858: PIGH, phosphatidylinositol N-acetylglucosaminyltransferase subunit H
6 Sobic.007G014900 STIP1 homology and U box-containing protein 1, putative, expressed K09561: STUB1, STIP1 homology and U-box containing protein 1
7 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
8 Sobic.004G356900 - K13025: EIF4A3, ATP-dependent RNA helicase
9 Sobic.010G209000 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4
10 Sobic.002G204000 26S proteasome non-ATPase regulatory subunit 9, putative, expressed K06693: PSMD9, 26S proteasome regulatory subunit N4
11 Sobic.002G383300 MYST-like histone acetyltransferase 1, putative, expressed K11308: MYST1, MOF, histone acetyltransferase MYST1
12 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
13 Sobic.007G075900 SKP1, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
14 Sobic.010G027600 transcription factor TFIIF, putative, expressed K11341: YEATS4, GAS41, YEATS domain-containing protein 4
15 Sobic.004G186000 salt tolerant protein, putative, expressed -
16 Sobic.001G360200 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
17 Sobic.002G281300 trafficking protein particle complex subunit, putative, expressed -
18 Sobic.002G268400 expressed protein -
19 Sobic.010G028300 bromodomain domain containing protein, expressed -
20 Sobic.006G101700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46


Gene co-expression network
sample Sobic009G083200 Sobic009G083200 Sobic006G225300 Sobic006G225300 Sobic009G083200--Sobic006G225300 Sobic010G193800 Sobic010G193800 Sobic009G083200--Sobic010G193800 Sobic004G226800 Sobic004G226800 Sobic009G083200--Sobic004G226800 Sobic002G256300 Sobic002G256300 Sobic009G083200--Sobic002G256300 Sobic009G058500 Sobic009G058500 Sobic009G083200--Sobic009G058500 Sobic007G014900 Sobic007G014900 Sobic009G083200--Sobic007G014900 Sobic010G083700 Sobic010G083700 Sobic009G083200--Sobic010G083700 Sobic004G356900 Sobic004G356900 Sobic009G083200--Sobic004G356900 Sobic010G209000 Sobic010G209000 Sobic009G083200--Sobic010G209000 Sobic001G294900 Sobic001G294900 Sobic006G225300--Sobic001G294900 Sobic003G201900 Sobic003G201900 Sobic006G225300--Sobic003G201900 Sobic006G225300--Sobic010G193800 Sobic006G225300--Sobic009G083200 Sobic001G439600 Sobic001G439600 Sobic006G225300--Sobic001G439600 Sobic006G225300--Sobic002G256300 Sobic001G532100 Sobic001G532100 Sobic006G225300--Sobic001G532100 Sobic004G104900 Sobic004G104900 Sobic006G225300--Sobic004G104900 Sobic009G135600 Sobic009G135600 Sobic006G225300--Sobic009G135600 Sobic003G420700 Sobic003G420700 Sobic010G193800--Sobic003G420700 Sobic010G193800--Sobic004G356900 Sobic010G193800--Sobic002G256300 Sobic010G193800--Sobic001G532100 Sobic010G193800--Sobic006G225300 Sobic007G203700 Sobic007G203700 Sobic010G193800--Sobic007G203700 Sobic010G193800--Sobic001G439600 Sobic004G141700 Sobic004G141700 Sobic010G193800--Sobic004G141700 Sobic009G246950 Sobic009G246950 Sobic010G193800--Sobic009G246950 Sobic004G226800--Sobic004G356900 Sobic006G049700 Sobic006G049700 Sobic004G226800--Sobic006G049700 Sobic004G226800--Sobic002G256300 Sobic002G113900 Sobic002G113900 Sobic004G226800--Sobic002G113900 Sobic004G226800--Sobic010G193800 Sobic003G226500 Sobic003G226500 Sobic004G226800--Sobic003G226500 Sobic001G459100 Sobic001G459100 Sobic004G226800--Sobic001G459100 Sobic002G204000 Sobic002G204000 Sobic004G226800--Sobic002G204000 Sobic004G232800 Sobic004G232800 Sobic004G226800--Sobic004G232800 Sobic002G256300--Sobic009G246950 Sobic002G256300--Sobic010G083700 Sobic002G256300--Sobic004G104900 Sobic010G168600 Sobic010G168600 Sobic002G256300--Sobic010G168600 Sobic001G136900 Sobic001G136900 Sobic002G256300--Sobic001G136900 Sobic002G256300--Sobic010G193800 Sobic002G256300--Sobic001G439600 Sobic006G263900 Sobic006G263900 Sobic002G256300--Sobic006G263900 Sobic009G171700 Sobic009G171700 Sobic002G256300--Sobic009G171700 Sobic001G360200 Sobic001G360200 Sobic009G058500--Sobic001G360200 Sobic007G184500 Sobic007G184500 Sobic009G058500--Sobic007G184500 Sobic010G018700 Sobic010G018700 Sobic009G058500--Sobic010G018700 Sobic002G077900 Sobic002G077900 Sobic009G058500--Sobic002G077900 Sobic003G439800 Sobic003G439800 Sobic009G058500--Sobic003G439800 Sobic003G074400 Sobic003G074400 Sobic009G058500--Sobic003G074400 Sobic006G278700 Sobic006G278700 Sobic009G058500--Sobic006G278700 Sobic006G044600 Sobic006G044600 Sobic009G058500--Sobic006G044600 Sobic004G346100 Sobic004G346100 Sobic009G058500--Sobic004G346100 Sobic001G085100 Sobic001G085100 Sobic007G014900--Sobic001G085100 Sobic007G014900--Sobic004G356900 Sobic010G205300 Sobic010G205300 Sobic007G014900--Sobic010G205300 Sobic007G014900--Sobic006G225300 Sobic007G167900 Sobic007G167900 Sobic007G014900--Sobic007G167900 Sobic006G183000 Sobic006G183000 Sobic007G014900--Sobic006G183000 Sobic003G312200 Sobic003G312200 Sobic007G014900--Sobic003G312200 Sobic004G194900 Sobic004G194900 Sobic007G014900--Sobic004G194900 Sobic007G188300 Sobic007G188300 Sobic007G014900--Sobic007G188300 Sobic010G083700--Sobic006G263900 Sobic010G083700--Sobic010G168600 Sobic001G054200 Sobic001G054200 Sobic010G083700--Sobic001G054200 Sobic001G007200 Sobic001G007200 Sobic010G083700--Sobic001G007200 Sobic010G083700--Sobic009G246950 Sobic004G293700 Sobic004G293700 Sobic010G083700--Sobic004G293700 Sobic010G253800 Sobic010G253800 Sobic010G083700--Sobic010G253800 Sobic010G083700--Sobic002G256300 Sobic003G007500 Sobic003G007500 Sobic010G083700--Sobic003G007500 Sobic008G004400 Sobic008G004400 Sobic004G356900--Sobic008G004400 Sobic004G356900--Sobic004G226800 Sobic009G004600 Sobic009G004600 Sobic004G356900--Sobic009G004600 Sobic004G356900--Sobic010G193800 Sobic004G356900--Sobic010G205300 Sobic006G101700 Sobic006G101700 Sobic004G356900--Sobic006G101700 Sobic004G356900--Sobic004G232800 Sobic002G268400 Sobic002G268400 Sobic004G356900--Sobic002G268400 Sobic003G239800 Sobic003G239800 Sobic004G356900--Sobic003G239800 Sobic007G075900 Sobic007G075900 Sobic010G209000--Sobic007G075900 Sobic010G209000--Sobic006G101700 Sobic008G124900 Sobic008G124900 Sobic010G209000--Sobic008G124900 Sobic001G515100 Sobic001G515100 Sobic010G209000--Sobic001G515100 Sobic006G017000 Sobic006G017000 Sobic010G209000--Sobic006G017000 Sobic007G166400 Sobic007G166400 Sobic010G209000--Sobic007G166400 Sobic008G050800 Sobic008G050800 Sobic010G209000--Sobic008G050800 Sobic010G209000--Sobic001G360200 Sobic001G392300 Sobic001G392300 Sobic010G209000--Sobic001G392300
Octagon: transcription factors


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