Gene annotation
Transcriptome id Sobic.004G226800.1
Synonym Sb04g027120
Functional annotation expressed protein
UniProt A0A194YR82
Pfam -
Panther DB PTHR37202 PTHR37202:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G73350 : -
RAP-DB (Rice) LOC_Os02g42540.1 : expressed protein
MaizeGDB (Corn) Zm00025a032098
Brachypodium KQJ87396 , PNT63045 , PNT63047 , PNT63046
Barley -
Wheat TraesCS2A02G167000 , TraesCS5B02G135500 , TraesCS5B02G135500 , TraesCS2D02G174600 , TraesCS2B02G193200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G356900 - K13025: EIF4A3, ATP-dependent RNA helicase
2 Sobic.006G049700 SAM domain family protein, expressed -
3 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.002G113900 lipid binding protein, putative, expressed -
5 Sobic.010G193800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
6 Sobic.003G226500 suppressor of G2 allele of SKP1, putative, expressed K12795: SUGT1, suppressor of G2 allele of SKP1
7 Sobic.001G459100 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
8 Sobic.002G204000 26S proteasome non-ATPase regulatory subunit 9, putative, expressed K06693: PSMD9, 26S proteasome regulatory subunit N4
9 Sobic.004G232800 expressed protein -
10 Sobic.009G083200 coiled-coil domain-containing protein 25, putative, expressed -
11 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
12 Sobic.002G110700 uncharacterized ACR, YggU family COG1872 containing protein, expressed K09131: uncharacterized protein
13 Sobic.004G316900 autophagy-related protein 12, putative, expressed K08336: ubiquitin-like protein ATG12
14 Sobic.006G101700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
15 Sobic.010G205300 secreted salivary protein, putative, expressed -
16 Sobic.001G136900 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
17 Sobic.002G268400 expressed protein -
18 Sobic.002G087900 protein phosphatase inhibitor 2 containing protein, expressed K16833: PPP1R2, protein phosphatase inhibitor 2
19 Sobic.001G054200 green ripe-like, putative, expressed -
20 Sobic.004G115350 - K12843: PRPF3, U4/U6 small nuclear ribonucleoprotein PRP3


Gene co-expression network
sample Sobic004G226800 Sobic004G226800 Sobic004G356900 Sobic004G356900 Sobic004G226800--Sobic004G356900 Sobic006G049700 Sobic006G049700 Sobic004G226800--Sobic006G049700 Sobic002G256300 Sobic002G256300 Sobic004G226800--Sobic002G256300 Sobic002G113900 Sobic002G113900 Sobic004G226800--Sobic002G113900 Sobic010G193800 Sobic010G193800 Sobic004G226800--Sobic010G193800 Sobic003G226500 Sobic003G226500 Sobic004G226800--Sobic003G226500 Sobic001G459100 Sobic001G459100 Sobic004G226800--Sobic001G459100 Sobic002G204000 Sobic002G204000 Sobic004G226800--Sobic002G204000 Sobic004G232800 Sobic004G232800 Sobic004G226800--Sobic004G232800 Sobic008G004400 Sobic008G004400 Sobic004G356900--Sobic008G004400 Sobic004G356900--Sobic004G226800 Sobic009G004600 Sobic009G004600 Sobic004G356900--Sobic009G004600 Sobic004G356900--Sobic010G193800 Sobic010G205300 Sobic010G205300 Sobic004G356900--Sobic010G205300 Sobic006G101700 Sobic006G101700 Sobic004G356900--Sobic006G101700 Sobic004G356900--Sobic004G232800 Sobic002G268400 Sobic002G268400 Sobic004G356900--Sobic002G268400 Sobic003G239800 Sobic003G239800 Sobic004G356900--Sobic003G239800 Sobic009G222500 Sobic009G222500 Sobic006G049700--Sobic009G222500 Sobic007G166400 Sobic007G166400 Sobic006G049700--Sobic007G166400 Sobic003G264200 Sobic003G264200 Sobic006G049700--Sobic003G264200 Sobic006G049700--Sobic006G101700 Sobic007G167900 Sobic007G167900 Sobic006G049700--Sobic007G167900 Sobic006G049700--Sobic004G226800 Sobic010G027600 Sobic010G027600 Sobic006G049700--Sobic010G027600 Sobic006G049700--Sobic002G113900 Sobic006G049700--Sobic004G356900 Sobic009G246950 Sobic009G246950 Sobic002G256300--Sobic009G246950 Sobic010G083700 Sobic010G083700 Sobic002G256300--Sobic010G083700 Sobic004G104900 Sobic004G104900 Sobic002G256300--Sobic004G104900 Sobic010G168600 Sobic010G168600 Sobic002G256300--Sobic010G168600 Sobic001G136900 Sobic001G136900 Sobic002G256300--Sobic001G136900 Sobic002G256300--Sobic010G193800 Sobic001G439600 Sobic001G439600 Sobic002G256300--Sobic001G439600 Sobic006G263900 Sobic006G263900 Sobic002G256300--Sobic006G263900 Sobic009G171700 Sobic009G171700 Sobic002G256300--Sobic009G171700 Sobic006G270900 Sobic006G270900 Sobic002G113900--Sobic006G270900 Sobic002G113900--Sobic009G004600 Sobic002G113900--Sobic004G226800 Sobic002G113900--Sobic006G049700 Sobic002G113900--Sobic004G356900 Sobic004G301900 Sobic004G301900 Sobic002G113900--Sobic004G301900 Sobic007G019800 Sobic007G019800 Sobic002G113900--Sobic007G019800 Sobic002G113900--Sobic004G104900 Sobic002G113900--Sobic002G268400 Sobic003G420700 Sobic003G420700 Sobic010G193800--Sobic003G420700 Sobic010G193800--Sobic004G356900 Sobic010G193800--Sobic002G256300 Sobic001G532100 Sobic001G532100 Sobic010G193800--Sobic001G532100 Sobic006G225300 Sobic006G225300 Sobic010G193800--Sobic006G225300 Sobic007G203700 Sobic007G203700 Sobic010G193800--Sobic007G203700 Sobic010G193800--Sobic001G439600 Sobic004G141700 Sobic004G141700 Sobic010G193800--Sobic004G141700 Sobic010G193800--Sobic009G246950 Sobic003G250500 Sobic003G250500 Sobic003G226500--Sobic003G250500 Sobic003G226500--Sobic004G104900 Sobic003G007500 Sobic003G007500 Sobic003G226500--Sobic003G007500 Sobic003G350600 Sobic003G350600 Sobic003G226500--Sobic003G350600 Sobic003G226500--Sobic001G136900 Sobic003G226500--Sobic010G083700 Sobic003G226500--Sobic004G226800 Sobic001G512600 Sobic001G512600 Sobic003G226500--Sobic001G512600 Sobic001G054200 Sobic001G054200 Sobic003G226500--Sobic001G054200 Sobic001G459100--Sobic004G226800 Sobic001G459100--Sobic006G049700 Sobic001G234200 Sobic001G234200 Sobic001G459100--Sobic001G234200 Sobic001G459100--Sobic004G232800 Sobic001G459100--Sobic002G113900 Sobic001G459100--Sobic004G356900 Sobic006G233000 Sobic006G233000 Sobic001G459100--Sobic006G233000 Sobic004G077600 Sobic004G077600 Sobic001G459100--Sobic004G077600 Sobic001G119900 Sobic001G119900 Sobic001G459100--Sobic001G119900 Sobic001G038100 Sobic001G038100 Sobic002G204000--Sobic001G038100 Sobic004G186000 Sobic004G186000 Sobic002G204000--Sobic004G186000 Sobic004G316900 Sobic004G316900 Sobic002G204000--Sobic004G316900 Sobic004G019600 Sobic004G019600 Sobic002G204000--Sobic004G019600 Sobic001G329300 Sobic001G329300 Sobic002G204000--Sobic001G329300 Sobic002G204000--Sobic010G193800 Sobic002G204000--Sobic004G226800 Sobic002G204000--Sobic001G136900 Sobic001G507400 Sobic001G507400 Sobic002G204000--Sobic001G507400 Sobic004G232800--Sobic010G205300 Sobic004G232800--Sobic004G356900 Sobic004G232800--Sobic009G004600 Sobic004G232800--Sobic006G049700 Sobic009G192000 Sobic009G192000 Sobic004G232800--Sobic009G192000 Sobic010G057900 Sobic010G057900 Sobic004G232800--Sobic010G057900 Sobic003G349300 Sobic003G349300 Sobic004G232800--Sobic003G349300 Sobic004G232800--Sobic004G226800 Sobic004G232800--Sobic002G113900
Octagon: transcription factors


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