Gene annotation
Transcriptome id Sobic.002G204000.1
Synonym Sb02g024860
Functional annotation 26S proteasome non-ATPase regulatory subunit 9, putative, expressed
UniProt C5XCV7
Pfam -
Panther DB PTHR12651 PTHR12651:SF1
NCBI CDD KOG3129; 26S proteasome regulatory complex, subunit PSMD9
KEGG Orthology K06693; PSMD9, 26S proteasome regulatory subunit N4
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57950 : 26S proteasome regulatory subunit, putative
RAP-DB (Rice) LOC_Os09g25310.1 : 26S proteasome non-ATPase regulatory subunit 9, putative, expressed
MaizeGDB (Corn) Zm00025a047016
Brachypodium -
Barley HORVU5Hr1G065220.4 , HORVU5Hr1G065220.5 , HORVU5Hr1G065220.2 , HORVU5Hr1G065220.3 , HORVU5Hr1G065220.1
Wheat TraesCS5A02G224200 , TraesCS5B02G223000 , TraesCS5D02G231600 , TraesCS5D02G231600
Populus -


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cDNA sequences
Sobic.002G204000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
2 Sobic.004G186000 salt tolerant protein, putative, expressed -
3 Sobic.004G316900 autophagy-related protein 12, putative, expressed K08336: ubiquitin-like protein ATG12
4 Sobic.004G019600 histone deacetylase complex subunit SAP18, putative, expressed K14324: histone deacetylase complex subunit SAP18
5 Sobic.001G329300 expressed protein -
6 Sobic.010G193800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
7 Sobic.004G226800 expressed protein -
8 Sobic.001G136900 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
9 Sobic.001G507400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
10 Sobic.006G011000 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, putative, expressed K12893: splicing factor, arginine/serine-rich 4/5/6
11 Sobic.009G083200 coiled-coil domain-containing protein 25, putative, expressed -
12 Sobic.005G187500 GRF-interacting factor 2, putative, expressed -
13 Sobic.002G359900 nuclear transport factor 2, putative, expressed -
14 Sobic.001G532100 proteasome subunit, putative, expressed K12175: GPS1, COPS1, COP9 signalosome complex subunit 1
15 Sobic.006G225300 expressed protein -
16 Sobic.003G316850 - -
17 Sobic.009G258400 adhesion regulating molecule family, putative, expressed -
18 Sobic.010G253100 OsRhmbd3 - Putative Rhomboid homologue, expressed K09651: rhomboid domain-containing protein 1
19 Sobic.009G231900 expressed protein -
20 Sobic.002G123200 DNA directed RNA polymerase, 7 kDa subunit domain containing protein, expressed K03009: RPB12, DNA-directed RNA polymerases I, II, and III subunit RPABC4


Gene co-expression network
sample Sobic002G204000 Sobic002G204000 Sobic001G038100 Sobic001G038100 Sobic002G204000--Sobic001G038100 Sobic004G186000 Sobic004G186000 Sobic002G204000--Sobic004G186000 Sobic004G316900 Sobic004G316900 Sobic002G204000--Sobic004G316900 Sobic004G019600 Sobic004G019600 Sobic002G204000--Sobic004G019600 Sobic001G329300 Sobic001G329300 Sobic002G204000--Sobic001G329300 Sobic010G193800 Sobic010G193800 Sobic002G204000--Sobic010G193800 Sobic004G226800 Sobic004G226800 Sobic002G204000--Sobic004G226800 Sobic001G136900 Sobic001G136900 Sobic002G204000--Sobic001G136900 Sobic001G507400 Sobic001G507400 Sobic002G204000--Sobic001G507400 Sobic001G038100--Sobic002G204000 Sobic001G309100 Sobic001G309100 Sobic001G038100--Sobic001G309100 Sobic001G038100--Sobic001G507400 Sobic006G120800 Sobic006G120800 Sobic001G038100--Sobic006G120800 Sobic007G117100 Sobic007G117100 Sobic001G038100--Sobic007G117100 Sobic003G420700 Sobic003G420700 Sobic001G038100--Sobic003G420700 Sobic001G038100--Sobic004G186000 Sobic006G261100 Sobic006G261100 Sobic001G038100--Sobic006G261100 Sobic004G260400 Sobic004G260400 Sobic001G038100--Sobic004G260400 Sobic004G186000--Sobic002G204000 Sobic004G186000--Sobic001G038100 Sobic008G128600 Sobic008G128600 Sobic004G186000--Sobic008G128600 Sobic010G028300 Sobic010G028300 Sobic004G186000--Sobic010G028300 Sobic001G473600 Sobic001G473600 Sobic004G186000--Sobic001G473600 Sobic006G252300 Sobic006G252300 Sobic004G186000--Sobic006G252300 Sobic007G191700 Sobic007G191700 Sobic004G186000--Sobic007G191700 Sobic004G186000--Sobic001G507400 Sobic001G131800 Sobic001G131800 Sobic004G186000--Sobic001G131800 Sobic004G316900--Sobic001G136900 Sobic004G316900--Sobic002G204000 Sobic002G256300 Sobic002G256300 Sobic004G316900--Sobic002G256300 Sobic001G529000 Sobic001G529000 Sobic004G316900--Sobic001G529000 Sobic003G316850 Sobic003G316850 Sobic004G316900--Sobic003G316850 Sobic004G316900--Sobic010G193800 Sobic004G316900--Sobic004G226800 Sobic007G203700 Sobic007G203700 Sobic004G316900--Sobic007G203700 Sobic001G439600 Sobic001G439600 Sobic004G316900--Sobic001G439600 Sobic004G019600--Sobic002G204000 Sobic001G346300 Sobic001G346300 Sobic004G019600--Sobic001G346300 Sobic001G114500 Sobic001G114500 Sobic004G019600--Sobic001G114500 Sobic010G220900 Sobic010G220900 Sobic004G019600--Sobic010G220900 Sobic006G087100 Sobic006G087100 Sobic004G019600--Sobic006G087100 Sobic001G152000 Sobic001G152000 Sobic004G019600--Sobic001G152000 Sobic009G258400 Sobic009G258400 Sobic004G019600--Sobic009G258400 Sobic004G212700 Sobic004G212700 Sobic004G019600--Sobic004G212700 Sobic009G231900 Sobic009G231900 Sobic004G019600--Sobic009G231900 Sobic001G329300--Sobic002G204000 Sobic006G011000 Sobic006G011000 Sobic001G329300--Sobic006G011000 Sobic007G226100 Sobic007G226100 Sobic001G329300--Sobic007G226100 Sobic006G252100 Sobic006G252100 Sobic001G329300--Sobic006G252100 Sobic001G329300--Sobic004G226800 Sobic006G094600 Sobic006G094600 Sobic001G329300--Sobic006G094600 Sobic001G329300--Sobic004G316900 Sobic001G350501 Sobic001G350501 Sobic001G329300--Sobic001G350501 Sobic001G329300--Sobic010G193800 Sobic010G193800--Sobic003G420700 Sobic004G356900 Sobic004G356900 Sobic010G193800--Sobic004G356900 Sobic010G193800--Sobic002G256300 Sobic001G532100 Sobic001G532100 Sobic010G193800--Sobic001G532100 Sobic006G225300 Sobic006G225300 Sobic010G193800--Sobic006G225300 Sobic010G193800--Sobic007G203700 Sobic010G193800--Sobic001G439600 Sobic004G141700 Sobic004G141700 Sobic010G193800--Sobic004G141700 Sobic009G246950 Sobic009G246950 Sobic010G193800--Sobic009G246950 Sobic004G226800--Sobic004G356900 Sobic006G049700 Sobic006G049700 Sobic004G226800--Sobic006G049700 Sobic004G226800--Sobic002G256300 Sobic002G113900 Sobic002G113900 Sobic004G226800--Sobic002G113900 Sobic004G226800--Sobic010G193800 Sobic003G226500 Sobic003G226500 Sobic004G226800--Sobic003G226500 Sobic001G459100 Sobic001G459100 Sobic004G226800--Sobic001G459100 Sobic004G226800--Sobic002G204000 Sobic004G232800 Sobic004G232800 Sobic004G226800--Sobic004G232800 Sobic001G136900--Sobic001G439600 Sobic001G136900--Sobic002G256300 Sobic001G136900--Sobic004G316900 Sobic010G083700 Sobic010G083700 Sobic001G136900--Sobic010G083700 Sobic006G263900 Sobic006G263900 Sobic001G136900--Sobic006G263900 Sobic002G129000 Sobic002G129000 Sobic001G136900--Sobic002G129000 Sobic006G183000 Sobic006G183000 Sobic001G136900--Sobic006G183000 Sobic006G262900 Sobic006G262900 Sobic001G136900--Sobic006G262900 Sobic001G129300 Sobic001G129300 Sobic001G136900--Sobic001G129300 Sobic001G507400--Sobic001G038100 Sobic001G507400--Sobic007G117100 Sobic001G507400--Sobic007G191700 Sobic001G507400--Sobic006G120800 Sobic001G507400--Sobic009G258400 Sobic002G014700 Sobic002G014700 Sobic001G507400--Sobic002G014700 Sobic001G507400--Sobic003G420700 Sobic001G507400--Sobic002G204000 Sobic010G154000 Sobic010G154000 Sobic001G507400--Sobic010G154000
Octagon: transcription factors


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