Gene annotation
Transcriptome id Sobic.001G136900.1
Synonym ATUBC2-1, Sb01g011940, UBC15
Functional annotation ubiquitin-conjugating enzyme E2 W, putative, expressed
UniProt C5WPM7
Pfam PF00179
Panther DB PTHR24067 PTHR24067:SF155
NCBI CDD KOG0427; Ubiquitin conjugating enzyme
KEGG Orthology K10688; UBE2W, ubiquitin-conjugating enzyme E2 W
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42990 : ubiquitin-conjugating enzyme 18
RAP-DB (Rice) LOC_Os03g47770.1 : ubiquitin-conjugating enzyme E2 W, putative, expressed
MaizeGDB (Corn) Zm00025a017116 , Zm00025a007457
Brachypodium KQJ85619 , KQK13783
Barley -
Wheat -
Populus PNT36293 , PNT36294


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G439600 26S proteasome non-ATPase regulatory subunit 4, putative, expressed K03029: PSMD4, 26S proteasome regulatory subunit N10
2 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.004G316900 autophagy-related protein 12, putative, expressed K08336: ubiquitin-like protein ATG12
4 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
5 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
6 Sobic.002G129000 RING zinc finger protein, putative, expressed -
7 Sobic.006G183000 RING zinc finger protein, putative, expressed -
8 Sobic.006G262900 expressed protein -
9 Sobic.001G129300 ribosomal L18p/L5e family protein, putative, expressed -
10 Sobic.010G193800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
11 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
12 Sobic.003G226500 suppressor of G2 allele of SKP1, putative, expressed K12795: SUGT1, suppressor of G2 allele of SKP1
13 Sobic.010G168600 ethylene-responsive element-binding protein, putative, expressed -
14 Sobic.003G405700 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
15 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
16 Sobic.010G067700 expressed protein -
17 Sobic.001G054200 green ripe-like, putative, expressed -
18 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
19 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
20 Sobic.001G078500 expressed protein -


Gene co-expression network
sample Sobic001G136900 Sobic001G136900 Sobic001G439600 Sobic001G439600 Sobic001G136900--Sobic001G439600 Sobic002G256300 Sobic002G256300 Sobic001G136900--Sobic002G256300 Sobic004G316900 Sobic004G316900 Sobic001G136900--Sobic004G316900 Sobic010G083700 Sobic010G083700 Sobic001G136900--Sobic010G083700 Sobic006G263900 Sobic006G263900 Sobic001G136900--Sobic006G263900 Sobic002G129000 Sobic002G129000 Sobic001G136900--Sobic002G129000 Sobic006G183000 Sobic006G183000 Sobic001G136900--Sobic006G183000 Sobic006G262900 Sobic006G262900 Sobic001G136900--Sobic006G262900 Sobic001G129300 Sobic001G129300 Sobic001G136900--Sobic001G129300 Sobic003G124800 Sobic003G124800 Sobic001G439600--Sobic003G124800 Sobic001G439600--Sobic002G129000 Sobic001G439600--Sobic010G083700 Sobic001G294900 Sobic001G294900 Sobic001G439600--Sobic001G294900 Sobic001G439600--Sobic001G136900 Sobic001G054200 Sobic001G054200 Sobic001G439600--Sobic001G054200 Sobic010G168600 Sobic010G168600 Sobic001G439600--Sobic010G168600 Sobic001G439600--Sobic002G256300 Sobic001G529000 Sobic001G529000 Sobic001G439600--Sobic001G529000 Sobic009G246950 Sobic009G246950 Sobic002G256300--Sobic009G246950 Sobic002G256300--Sobic010G083700 Sobic004G104900 Sobic004G104900 Sobic002G256300--Sobic004G104900 Sobic002G256300--Sobic010G168600 Sobic002G256300--Sobic001G136900 Sobic010G193800 Sobic010G193800 Sobic002G256300--Sobic010G193800 Sobic002G256300--Sobic001G439600 Sobic002G256300--Sobic006G263900 Sobic009G171700 Sobic009G171700 Sobic002G256300--Sobic009G171700 Sobic004G316900--Sobic001G136900 Sobic002G204000 Sobic002G204000 Sobic004G316900--Sobic002G204000 Sobic004G316900--Sobic002G256300 Sobic004G316900--Sobic001G529000 Sobic003G316850 Sobic003G316850 Sobic004G316900--Sobic003G316850 Sobic004G316900--Sobic010G193800 Sobic004G226800 Sobic004G226800 Sobic004G316900--Sobic004G226800 Sobic007G203700 Sobic007G203700 Sobic004G316900--Sobic007G203700 Sobic004G316900--Sobic001G439600 Sobic010G083700--Sobic006G263900 Sobic010G083700--Sobic010G168600 Sobic010G083700--Sobic001G054200 Sobic001G007200 Sobic001G007200 Sobic010G083700--Sobic001G007200 Sobic010G083700--Sobic009G246950 Sobic004G293700 Sobic004G293700 Sobic010G083700--Sobic004G293700 Sobic010G253800 Sobic010G253800 Sobic010G083700--Sobic010G253800 Sobic010G083700--Sobic002G256300 Sobic003G007500 Sobic003G007500 Sobic010G083700--Sobic003G007500 Sobic006G263900--Sobic010G083700 Sobic006G263900--Sobic001G054200 Sobic006G263900--Sobic010G168600 Sobic001G395400 Sobic001G395400 Sobic006G263900--Sobic001G395400 Sobic001G078500 Sobic001G078500 Sobic006G263900--Sobic001G078500 Sobic006G212100 Sobic006G212100 Sobic006G263900--Sobic006G212100 Sobic006G263900--Sobic010G253800 Sobic006G263900--Sobic009G246950 Sobic006G263900--Sobic003G007500 Sobic002G129000--Sobic006G183000 Sobic002G129000--Sobic001G439600 Sobic009G050700 Sobic009G050700 Sobic002G129000--Sobic009G050700 Sobic002G129000--Sobic001G294900 Sobic002G400000 Sobic002G400000 Sobic002G129000--Sobic002G400000 Sobic002G129000--Sobic010G168600 Sobic002G129000--Sobic001G136900 Sobic002G129000--Sobic006G263900 Sobic003G405700 Sobic003G405700 Sobic002G129000--Sobic003G405700 Sobic006G183000--Sobic002G129000 Sobic006G183000--Sobic001G294900 Sobic009G033900 Sobic009G033900 Sobic006G183000--Sobic009G033900 Sobic006G109700 Sobic006G109700 Sobic006G183000--Sobic006G109700 Sobic002G268400 Sobic002G268400 Sobic006G183000--Sobic002G268400 Sobic006G183000--Sobic001G136900 Sobic006G183000--Sobic009G050700 Sobic006G183000--Sobic003G405700 Sobic006G094600 Sobic006G094600 Sobic006G183000--Sobic006G094600 Sobic009G198500 Sobic009G198500 Sobic006G262900--Sobic009G198500 Sobic006G262900--Sobic003G124800 Sobic006G262900--Sobic006G263900 Sobic006G262900--Sobic001G136900 Sobic006G262900--Sobic001G054200 Sobic006G262900--Sobic010G083700 Sobic006G262900--Sobic001G129300 Sobic006G262900--Sobic007G203700 Sobic007G079700 Sobic007G079700 Sobic006G262900--Sobic007G079700 Sobic001G129300--Sobic001G136900 Sobic001G129300--Sobic006G262900 Sobic001G543300 Sobic001G543300 Sobic001G129300--Sobic001G543300 Sobic007G126200 Sobic007G126200 Sobic001G129300--Sobic007G126200 Sobic001G129300--Sobic006G183000 Sobic003G250500 Sobic003G250500 Sobic001G129300--Sobic003G250500 Sobic001G129300--Sobic009G033900 Sobic003G226500 Sobic003G226500 Sobic001G129300--Sobic003G226500 Sobic007G167700 Sobic007G167700 Sobic001G129300--Sobic007G167700
Octagon: transcription factors


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