Gene annotation
Transcriptome id Sobic.010G083700.1
Synonym Sb10g007260
Functional annotation formin-binding protein-related, putative, expressed
UniProt C5Z6J0
Pfam PF06220
Panther DB PTHR13173
NCBI CDD KOG0150; Spliceosomal protein FBP21
KEGG Orthology K13220; WBP4, WW domain-binding protein 4
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT1G49590 : C2H2 and C2HC zinc fingers superfamily protein
RAP-DB (Rice) LOC_Os06g11170.1 : formin-binding protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a049561
Brachypodium KQK19007
Barley HORVU7Hr1G035910.4 , HORVU7Hr1G035910.3 , HORVU7Hr1G035910.1
Wheat TraesCS7B02G078500 , TraesCS7D02G174600 , TraesCS7A02G173200
Populus -


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cDNA sequences
Sobic.010G083700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
2 Sobic.010G168600 ethylene-responsive element-binding protein, putative, expressed -
3 Sobic.001G054200 green ripe-like, putative, expressed -
4 Sobic.001G007200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
5 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
6 Sobic.004G293700 peroxisomal biogenesis factor 19, putative, expressed K13337: peroxin-19
7 Sobic.010G253800 expressed protein -
8 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
10 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
11 Sobic.001G439600 26S proteasome non-ATPase regulatory subunit 4, putative, expressed K03029: PSMD4, 26S proteasome regulatory subunit N10
12 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
13 Sobic.001G073000 expressed protein K09659: dolichol-phosphate mannosyltransferase subunit 3
14 Sobic.003G015900 CWC15 homolog A, putative, expressed K12863: protein CWC15
15 Sobic.009G171700 SAG20, putative, expressed -
16 Sobic.004G079100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
17 Sobic.001G078500 expressed protein -
18 Sobic.001G388200 ELMO/CED-12 family protein, putative, expressed -
19 Sobic.001G136900 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
20 Sobic.004G253000 AGAP000425-PA, putative, expressed K13120: protein FAM32A


Gene co-expression network
sample Sobic010G083700 Sobic010G083700 Sobic006G263900 Sobic006G263900 Sobic010G083700--Sobic006G263900 Sobic010G168600 Sobic010G168600 Sobic010G083700--Sobic010G168600 Sobic001G054200 Sobic001G054200 Sobic010G083700--Sobic001G054200 Sobic001G007200 Sobic001G007200 Sobic010G083700--Sobic001G007200 Sobic009G246950 Sobic009G246950 Sobic010G083700--Sobic009G246950 Sobic004G293700 Sobic004G293700 Sobic010G083700--Sobic004G293700 Sobic010G253800 Sobic010G253800 Sobic010G083700--Sobic010G253800 Sobic002G256300 Sobic002G256300 Sobic010G083700--Sobic002G256300 Sobic003G007500 Sobic003G007500 Sobic010G083700--Sobic003G007500 Sobic006G263900--Sobic010G083700 Sobic006G263900--Sobic001G054200 Sobic006G263900--Sobic010G168600 Sobic001G395400 Sobic001G395400 Sobic006G263900--Sobic001G395400 Sobic001G078500 Sobic001G078500 Sobic006G263900--Sobic001G078500 Sobic006G212100 Sobic006G212100 Sobic006G263900--Sobic006G212100 Sobic006G263900--Sobic010G253800 Sobic006G263900--Sobic009G246950 Sobic006G263900--Sobic003G007500 Sobic010G168600--Sobic010G083700 Sobic010G168600--Sobic001G078500 Sobic010G168600--Sobic009G246950 Sobic002G352700 Sobic002G352700 Sobic010G168600--Sobic002G352700 Sobic010G168600--Sobic006G263900 Sobic010G168600--Sobic003G007500 Sobic009G171700 Sobic009G171700 Sobic010G168600--Sobic009G171700 Sobic010G168600--Sobic002G256300 Sobic004G104900 Sobic004G104900 Sobic010G168600--Sobic004G104900 Sobic001G054200--Sobic010G083700 Sobic001G054200--Sobic006G263900 Sobic001G054200--Sobic006G212100 Sobic007G186300 Sobic007G186300 Sobic001G054200--Sobic007G186300 Sobic001G054200--Sobic004G293700 Sobic001G054200--Sobic009G246950 Sobic004G079100 Sobic004G079100 Sobic001G054200--Sobic004G079100 Sobic006G232200 Sobic006G232200 Sobic001G054200--Sobic006G232200 Sobic003G115800 Sobic003G115800 Sobic001G054200--Sobic003G115800 Sobic001G007200--Sobic010G083700 Sobic001G415500 Sobic001G415500 Sobic001G007200--Sobic001G415500 Sobic001G007200--Sobic007G186300 Sobic001G007200--Sobic010G253800 Sobic004G086600 Sobic004G086600 Sobic001G007200--Sobic004G086600 Sobic001G073000 Sobic001G073000 Sobic001G007200--Sobic001G073000 Sobic001G007200--Sobic009G246950 Sobic004G141700 Sobic004G141700 Sobic001G007200--Sobic004G141700 Sobic009G146100 Sobic009G146100 Sobic001G007200--Sobic009G146100 Sobic009G246950--Sobic002G256300 Sobic007G203700 Sobic007G203700 Sobic009G246950--Sobic007G203700 Sobic009G246950--Sobic010G168600 Sobic009G246950--Sobic010G083700 Sobic009G246950--Sobic001G054200 Sobic009G246950--Sobic007G186300 Sobic009G246950--Sobic009G171700 Sobic008G180900 Sobic008G180900 Sobic009G246950--Sobic008G180900 Sobic009G246950--Sobic001G007200 Sobic004G293700--Sobic010G253800 Sobic004G293700--Sobic004G079100 Sobic004G293700--Sobic010G083700 Sobic004G293700--Sobic001G054200 Sobic004G248800 Sobic004G248800 Sobic004G293700--Sobic004G248800 Sobic004G293700--Sobic009G171700 Sobic002G264400 Sobic002G264400 Sobic004G293700--Sobic002G264400 Sobic006G141500 Sobic006G141500 Sobic004G293700--Sobic006G141500 Sobic003G220600 Sobic003G220600 Sobic004G293700--Sobic003G220600 Sobic010G253800--Sobic009G146100 Sobic010G253800--Sobic004G293700 Sobic010G253800--Sobic010G083700 Sobic002G247500 Sobic002G247500 Sobic010G253800--Sobic002G247500 Sobic010G253800--Sobic002G352700 Sobic010G253800--Sobic001G007200 Sobic010G253800--Sobic006G263900 Sobic010G253800--Sobic009G171700 Sobic010G253800--Sobic001G054200 Sobic002G256300--Sobic009G246950 Sobic002G256300--Sobic010G083700 Sobic002G256300--Sobic004G104900 Sobic002G256300--Sobic010G168600 Sobic001G136900 Sobic001G136900 Sobic002G256300--Sobic001G136900 Sobic010G193800 Sobic010G193800 Sobic002G256300--Sobic010G193800 Sobic001G439600 Sobic001G439600 Sobic002G256300--Sobic001G439600 Sobic002G256300--Sobic006G263900 Sobic002G256300--Sobic009G171700 Sobic003G007500--Sobic007G186300 Sobic003G007500--Sobic010G083700 Sobic003G007500--Sobic010G168600 Sobic003G007500--Sobic001G078500 Sobic003G295400 Sobic003G295400 Sobic003G007500--Sobic003G295400 Sobic001G051200 Sobic001G051200 Sobic003G007500--Sobic001G051200 Sobic004G072800 Sobic004G072800 Sobic003G007500--Sobic004G072800 Sobic003G007500--Sobic004G104900 Sobic002G281300 Sobic002G281300 Sobic003G007500--Sobic002G281300
Octagon: transcription factors


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