Gene annotation
Transcriptome id Sobic.001G073000.1
Synonym Sb01g006570
Functional annotation expressed protein
UniProt C5WZ55
Pfam PF08285
Panther DB PTHR16433 PTHR16433:SF0
NCBI CDD -
KEGG Orthology K09659; dolichol-phosphate mannosyltransferase subunit 3
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G48140 : dolichol-phosphate mannosyltransferase-related
RAP-DB (Rice) LOC_Os02g51420.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ90988 , KQJ90989
Barley HORVU5Hr1G078330.4 , HORVU5Hr1G078330.2 , HORVU5Hr1G078330.1 , HORVU5Hr1G078330.3
Wheat TraesCS3D02G099800 , TraesCS3A02G099500 , TraesCS3B02G115900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G228800 dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed K09658: dolichol phosphate-mannose biosynthesis regulatory protein
2 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
3 Sobic.001G007200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
4 Sobic.001G415500 zinc finger, C3HC4 type domain containing protein, expressed K13125: nitric oxide synthase-interacting protein
5 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
6 Sobic.001G054200 green ripe-like, putative, expressed -
7 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
8 Sobic.010G253800 expressed protein -
9 Sobic.003G248600 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
10 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
11 Sobic.004G293700 peroxisomal biogenesis factor 19, putative, expressed K13337: peroxin-19
12 Sobic.009G171700 SAG20, putative, expressed -
13 Sobic.003G015900 CWC15 homolog A, putative, expressed K12863: protein CWC15
14 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
15 Sobic.010G168600 ethylene-responsive element-binding protein, putative, expressed -
16 Sobic.009G146100 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
17 Sobic.004G183501 - -
18 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
19 Sobic.010G027600 transcription factor TFIIF, putative, expressed K11341: YEATS4, GAS41, YEATS domain-containing protein 4
20 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit


Gene co-expression network
sample Sobic001G073000 Sobic001G073000 Sobic009G228800 Sobic009G228800 Sobic001G073000--Sobic009G228800 Sobic010G083700 Sobic010G083700 Sobic001G073000--Sobic010G083700 Sobic001G007200 Sobic001G007200 Sobic001G073000--Sobic001G007200 Sobic001G415500 Sobic001G415500 Sobic001G073000--Sobic001G415500 Sobic007G186300 Sobic007G186300 Sobic001G073000--Sobic007G186300 Sobic001G054200 Sobic001G054200 Sobic001G073000--Sobic001G054200 Sobic009G246950 Sobic009G246950 Sobic001G073000--Sobic009G246950 Sobic010G253800 Sobic010G253800 Sobic001G073000--Sobic010G253800 Sobic003G248600 Sobic003G248600 Sobic001G073000--Sobic003G248600 Sobic009G228800--Sobic001G073000 Sobic004G212200 Sobic004G212200 Sobic009G228800--Sobic004G212200 Sobic007G203700 Sobic007G203700 Sobic009G228800--Sobic007G203700 Sobic003G015900 Sobic003G015900 Sobic009G228800--Sobic003G015900 Sobic010G000900 Sobic010G000900 Sobic009G228800--Sobic010G000900 Sobic009G228800--Sobic003G248600 Sobic001G512300 Sobic001G512300 Sobic009G228800--Sobic001G512300 Sobic004G356900 Sobic004G356900 Sobic009G228800--Sobic004G356900 Sobic002G393500 Sobic002G393500 Sobic009G228800--Sobic002G393500 Sobic006G263900 Sobic006G263900 Sobic010G083700--Sobic006G263900 Sobic010G168600 Sobic010G168600 Sobic010G083700--Sobic010G168600 Sobic010G083700--Sobic001G054200 Sobic010G083700--Sobic001G007200 Sobic010G083700--Sobic009G246950 Sobic004G293700 Sobic004G293700 Sobic010G083700--Sobic004G293700 Sobic010G083700--Sobic010G253800 Sobic002G256300 Sobic002G256300 Sobic010G083700--Sobic002G256300 Sobic003G007500 Sobic003G007500 Sobic010G083700--Sobic003G007500 Sobic001G007200--Sobic010G083700 Sobic001G007200--Sobic001G415500 Sobic001G007200--Sobic007G186300 Sobic001G007200--Sobic010G253800 Sobic004G086600 Sobic004G086600 Sobic001G007200--Sobic004G086600 Sobic001G007200--Sobic001G073000 Sobic001G007200--Sobic009G246950 Sobic004G141700 Sobic004G141700 Sobic001G007200--Sobic004G141700 Sobic009G146100 Sobic009G146100 Sobic001G007200--Sobic009G146100 Sobic001G415500--Sobic001G007200 Sobic008G161800 Sobic008G161800 Sobic001G415500--Sobic008G161800 Sobic003G253000 Sobic003G253000 Sobic001G415500--Sobic003G253000 Sobic001G415500--Sobic009G146100 Sobic006G108400 Sobic006G108400 Sobic001G415500--Sobic006G108400 Sobic006G141500 Sobic006G141500 Sobic001G415500--Sobic006G141500 Sobic004G049900 Sobic004G049900 Sobic001G415500--Sobic004G049900 Sobic001G415500--Sobic004G293700 Sobic010G121300 Sobic010G121300 Sobic001G415500--Sobic010G121300 Sobic007G186300--Sobic003G007500 Sobic007G186300--Sobic001G054200 Sobic003G115800 Sobic003G115800 Sobic007G186300--Sobic003G115800 Sobic007G186300--Sobic003G248600 Sobic007G186300--Sobic001G007200 Sobic007G186300--Sobic009G246950 Sobic007G186300--Sobic010G083700 Sobic007G186300--Sobic009G146100 Sobic009G152200 Sobic009G152200 Sobic007G186300--Sobic009G152200 Sobic001G054200--Sobic010G083700 Sobic001G054200--Sobic006G263900 Sobic006G212100 Sobic006G212100 Sobic001G054200--Sobic006G212100 Sobic001G054200--Sobic007G186300 Sobic001G054200--Sobic004G293700 Sobic001G054200--Sobic009G246950 Sobic004G079100 Sobic004G079100 Sobic001G054200--Sobic004G079100 Sobic006G232200 Sobic006G232200 Sobic001G054200--Sobic006G232200 Sobic001G054200--Sobic003G115800 Sobic009G246950--Sobic002G256300 Sobic009G246950--Sobic007G203700 Sobic009G246950--Sobic010G168600 Sobic009G246950--Sobic010G083700 Sobic009G246950--Sobic001G054200 Sobic009G246950--Sobic007G186300 Sobic009G171700 Sobic009G171700 Sobic009G246950--Sobic009G171700 Sobic008G180900 Sobic008G180900 Sobic009G246950--Sobic008G180900 Sobic009G246950--Sobic001G007200 Sobic010G253800--Sobic009G146100 Sobic010G253800--Sobic004G293700 Sobic010G253800--Sobic010G083700 Sobic002G247500 Sobic002G247500 Sobic010G253800--Sobic002G247500 Sobic002G352700 Sobic002G352700 Sobic010G253800--Sobic002G352700 Sobic010G253800--Sobic001G007200 Sobic010G253800--Sobic006G263900 Sobic010G253800--Sobic009G171700 Sobic010G253800--Sobic001G054200 Sobic003G220600 Sobic003G220600 Sobic003G248600--Sobic003G220600 Sobic003G248600--Sobic007G186300 Sobic007G045600 Sobic007G045600 Sobic003G248600--Sobic007G045600 Sobic005G176000 Sobic005G176000 Sobic003G248600--Sobic005G176000 Sobic004G321900 Sobic004G321900 Sobic003G248600--Sobic004G321900 Sobic001G403700 Sobic001G403700 Sobic003G248600--Sobic001G403700 Sobic003G248600--Sobic009G146100 Sobic002G296300 Sobic002G296300 Sobic003G248600--Sobic002G296300 Sobic003G248600--Sobic001G073000
Octagon: transcription factors


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