Gene annotation
Transcriptome id Sobic.009G171700.1
Synonym Sb09g023280
Functional annotation SAG20, putative, expressed
UniProt C5YZQ7
Pfam PF04749 PF11204
Panther DB PTHR31045 PTHR31045:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G10980 : PLAC8 family protein
RAP-DB (Rice) LOC_Os05g39730.1 : SAG20, putative, expressed
MaizeGDB (Corn) Zm00025a037785
Brachypodium KQK05778
Barley HORVU1Hr1G070270.3 , HORVU1Hr1G070270.2 , HORVU1Hr1G070270.4 , HORVU1Hr1G070270.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G078500 expressed protein -
2 Sobic.010G168600 ethylene-responsive element-binding protein, putative, expressed -
3 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
4 Sobic.004G293700 peroxisomal biogenesis factor 19, putative, expressed K13337: peroxin-19
5 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
6 Sobic.010G253800 expressed protein -
7 Sobic.008G180900 YIF1B, putative, expressed -
8 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
9 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.009G193400 AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
11 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
12 Sobic.004G339200 CK1_CaseinKinase_1.6 - CK1 includes the casein kinase 1 kinases, expressed -
13 Sobic.003G295400 MAC/Perforin domain containing protein, putative, expressed -
14 Sobic.002G352700 expressed protein K08505: protein transport protein SFT1
15 Sobic.004G079100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
16 Sobic.009G146100 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
17 Sobic.001G073000 expressed protein K09659: dolichol-phosphate mannosyltransferase subunit 3
18 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
19 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
20 Sobic.007G059900 DUF292 domain containing protein, expressed -


Gene co-expression network
sample Sobic009G171700 Sobic009G171700 Sobic001G078500 Sobic001G078500 Sobic009G171700--Sobic001G078500 Sobic010G168600 Sobic010G168600 Sobic009G171700--Sobic010G168600 Sobic009G246950 Sobic009G246950 Sobic009G171700--Sobic009G246950 Sobic004G293700 Sobic004G293700 Sobic009G171700--Sobic004G293700 Sobic010G083700 Sobic010G083700 Sobic009G171700--Sobic010G083700 Sobic010G253800 Sobic010G253800 Sobic009G171700--Sobic010G253800 Sobic008G180900 Sobic008G180900 Sobic009G171700--Sobic008G180900 Sobic007G186300 Sobic007G186300 Sobic009G171700--Sobic007G186300 Sobic002G256300 Sobic002G256300 Sobic009G171700--Sobic002G256300 Sobic001G078500--Sobic010G168600 Sobic001G078500--Sobic009G171700 Sobic003G007500 Sobic003G007500 Sobic001G078500--Sobic003G007500 Sobic006G263900 Sobic006G263900 Sobic001G078500--Sobic006G263900 Sobic004G339200 Sobic004G339200 Sobic001G078500--Sobic004G339200 Sobic001G078500--Sobic010G083700 Sobic001G078500--Sobic009G246950 Sobic001G078500--Sobic007G186300 Sobic002G400000 Sobic002G400000 Sobic001G078500--Sobic002G400000 Sobic010G168600--Sobic010G083700 Sobic010G168600--Sobic001G078500 Sobic010G168600--Sobic009G246950 Sobic002G352700 Sobic002G352700 Sobic010G168600--Sobic002G352700 Sobic010G168600--Sobic006G263900 Sobic010G168600--Sobic003G007500 Sobic010G168600--Sobic009G171700 Sobic010G168600--Sobic002G256300 Sobic004G104900 Sobic004G104900 Sobic010G168600--Sobic004G104900 Sobic009G246950--Sobic002G256300 Sobic007G203700 Sobic007G203700 Sobic009G246950--Sobic007G203700 Sobic009G246950--Sobic010G168600 Sobic009G246950--Sobic010G083700 Sobic001G054200 Sobic001G054200 Sobic009G246950--Sobic001G054200 Sobic009G246950--Sobic007G186300 Sobic009G246950--Sobic009G171700 Sobic009G246950--Sobic008G180900 Sobic001G007200 Sobic001G007200 Sobic009G246950--Sobic001G007200 Sobic004G293700--Sobic010G253800 Sobic004G079100 Sobic004G079100 Sobic004G293700--Sobic004G079100 Sobic004G293700--Sobic010G083700 Sobic004G293700--Sobic001G054200 Sobic004G248800 Sobic004G248800 Sobic004G293700--Sobic004G248800 Sobic004G293700--Sobic009G171700 Sobic002G264400 Sobic002G264400 Sobic004G293700--Sobic002G264400 Sobic006G141500 Sobic006G141500 Sobic004G293700--Sobic006G141500 Sobic003G220600 Sobic003G220600 Sobic004G293700--Sobic003G220600 Sobic010G083700--Sobic006G263900 Sobic010G083700--Sobic010G168600 Sobic010G083700--Sobic001G054200 Sobic010G083700--Sobic001G007200 Sobic010G083700--Sobic009G246950 Sobic010G083700--Sobic004G293700 Sobic010G083700--Sobic010G253800 Sobic010G083700--Sobic002G256300 Sobic010G083700--Sobic003G007500 Sobic009G146100 Sobic009G146100 Sobic010G253800--Sobic009G146100 Sobic010G253800--Sobic004G293700 Sobic010G253800--Sobic010G083700 Sobic002G247500 Sobic002G247500 Sobic010G253800--Sobic002G247500 Sobic010G253800--Sobic002G352700 Sobic010G253800--Sobic001G007200 Sobic010G253800--Sobic006G263900 Sobic010G253800--Sobic009G171700 Sobic010G253800--Sobic001G054200 Sobic008G180900--Sobic009G246950 Sobic008G180900--Sobic010G168600 Sobic008G180900--Sobic009G171700 Sobic009G193400 Sobic009G193400 Sobic008G180900--Sobic009G193400 Sobic008G180900--Sobic002G352700 Sobic001G478300 Sobic001G478300 Sobic008G180900--Sobic001G478300 Sobic008G180900--Sobic002G256300 Sobic008G180900--Sobic010G083700 Sobic004G203100 Sobic004G203100 Sobic008G180900--Sobic004G203100 Sobic007G186300--Sobic003G007500 Sobic007G186300--Sobic001G054200 Sobic003G115800 Sobic003G115800 Sobic007G186300--Sobic003G115800 Sobic003G248600 Sobic003G248600 Sobic007G186300--Sobic003G248600 Sobic007G186300--Sobic001G007200 Sobic007G186300--Sobic009G246950 Sobic007G186300--Sobic010G083700 Sobic007G186300--Sobic009G146100 Sobic009G152200 Sobic009G152200 Sobic007G186300--Sobic009G152200 Sobic002G256300--Sobic009G246950 Sobic002G256300--Sobic010G083700 Sobic002G256300--Sobic004G104900 Sobic002G256300--Sobic010G168600 Sobic001G136900 Sobic001G136900 Sobic002G256300--Sobic001G136900 Sobic010G193800 Sobic010G193800 Sobic002G256300--Sobic010G193800 Sobic001G439600 Sobic001G439600 Sobic002G256300--Sobic001G439600 Sobic002G256300--Sobic006G263900 Sobic002G256300--Sobic009G171700
Octagon: transcription factors


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