Gene annotation
Transcriptome id Sobic.002G110700.2,Sobic.002G110700.1
Synonym Sb02g009470
Functional annotation uncharacterized ACR, YggU family COG1872 containing protein, expressed
UniProt A0A1B6QAJ8 , A0A1B6QAI0
Pfam PF02594
Panther DB PTHR13420 PTHR13420:SF3
NCBI CDD KOG3276; Uncharacterized conserved protein, contains YggU domain
KEGG Orthology K09131; uncharacterized protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G63440 : Protein of unknown function (DUF167)
RAP-DB (Rice) LOC_Os07g19470.1 : uncharacterized ACR, YggU family COG1872 containing protein, expressed
MaizeGDB (Corn) Zm00025a045653
Brachypodium PNT76753 , KQK20153 , KQK20154
Barley HORVU2Hr1G019200.4 , HORVU2Hr1G019200.5 , HORVU2Hr1G019200.6 , HORVU2Hr1G019200.7 , HORVU2Hr1G019200.1 , HORVU2Hr1G019200.2 , HORVU2Hr1G019200.3 , HORVU2Hr1G019200.8 , HORVU2Hr1G019200.9 , HORVU2Hr1G019200.12 , HORVU2Hr1G019200.10 , HORVU2Hr1G019200.11
Wheat TraesCS2A02G110600 , TraesCS2A02G110600 , TraesCS2B02G129400 , TraesCS2D02G111200
Populus -


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cDNA sequences
Sobic.002G110700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G165800 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
2 Sobic.010G027600 transcription factor TFIIF, putative, expressed K11341: YEATS4, GAS41, YEATS domain-containing protein 4
3 Sobic.004G121100 expressed protein -
4 Sobic.010G184100 mitochondrial carrier protein, putative, expressed -
5 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
6 Sobic.007G078500 serine/threonine-protein kinase HT1, putative, expressed -
7 Sobic.007G166100 no apical meristem protein, putative, expressed -
8 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
9 Sobic.002G113900 lipid binding protein, putative, expressed -
10 Sobic.004G226800 expressed protein -
11 Sobic.002G352600 expressed protein -
12 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
13 Sobic.001G007200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
14 Sobic.001G113000 tRNA synthetases class II domain containing protein, expressed K01893: NARS, asparaginyl-tRNA synthetase
15 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
16 Sobic.001G395400 ubiquitin-conjugating enzyme, putative, expressed K10578: UBE2J1, NCUBE1, ubiquitin-conjugating enzyme E2 J1
17 Sobic.001G181700 expressed protein -
18 Sobic.010G018700 H-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
19 Sobic.003G015900 CWC15 homolog A, putative, expressed K12863: protein CWC15
20 Sobic.006G252300 BSD domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G110700 Sobic002G110700 Sobic009G165800 Sobic009G165800 Sobic002G110700--Sobic009G165800 Sobic010G027600 Sobic010G027600 Sobic002G110700--Sobic010G027600 Sobic004G121100 Sobic004G121100 Sobic002G110700--Sobic004G121100 Sobic010G184100 Sobic010G184100 Sobic002G110700--Sobic010G184100 Sobic001G080700 Sobic001G080700 Sobic002G110700--Sobic001G080700 Sobic007G078500 Sobic007G078500 Sobic002G110700--Sobic007G078500 Sobic007G166100 Sobic007G166100 Sobic002G110700--Sobic007G166100 Sobic003G250500 Sobic003G250500 Sobic002G110700--Sobic003G250500 Sobic002G113900 Sobic002G113900 Sobic002G110700--Sobic002G113900 Sobic009G165800--Sobic001G080700 Sobic001G047400 Sobic001G047400 Sobic009G165800--Sobic001G047400 Sobic006G101700 Sobic006G101700 Sobic009G165800--Sobic006G101700 Sobic009G165800--Sobic002G110700 Sobic003G015900 Sobic003G015900 Sobic009G165800--Sobic003G015900 Sobic010G083700 Sobic010G083700 Sobic009G165800--Sobic010G083700 Sobic010G251000 Sobic010G251000 Sobic009G165800--Sobic010G251000 Sobic009G165800--Sobic004G121100 Sobic003G264200 Sobic003G264200 Sobic009G165800--Sobic003G264200 Sobic010G018700 Sobic010G018700 Sobic010G027600--Sobic010G018700 Sobic004G066200 Sobic004G066200 Sobic010G027600--Sobic004G066200 Sobic009G222500 Sobic009G222500 Sobic010G027600--Sobic009G222500 Sobic002G352600 Sobic002G352600 Sobic010G027600--Sobic002G352600 Sobic009G179700 Sobic009G179700 Sobic010G027600--Sobic009G179700 Sobic010G027600--Sobic002G110700 Sobic002G192200 Sobic002G192200 Sobic010G027600--Sobic002G192200 Sobic009G228700 Sobic009G228700 Sobic010G027600--Sobic009G228700 Sobic006G049700 Sobic006G049700 Sobic010G027600--Sobic006G049700 Sobic009G205200 Sobic009G205200 Sobic004G121100--Sobic009G205200 Sobic006G200600 Sobic006G200600 Sobic004G121100--Sobic006G200600 Sobic006G228500 Sobic006G228500 Sobic004G121100--Sobic006G228500 Sobic001G281600 Sobic001G281600 Sobic004G121100--Sobic001G281600 Sobic009G259400 Sobic009G259400 Sobic004G121100--Sobic009G259400 Sobic004G121100--Sobic007G078500 Sobic004G121100--Sobic001G080700 Sobic002G350300 Sobic002G350300 Sobic004G121100--Sobic002G350300 Sobic004G121100--Sobic010G251000 Sobic010G184100--Sobic002G110700 Sobic010G184100--Sobic009G165800 Sobic001G048100 Sobic001G048100 Sobic010G184100--Sobic001G048100 Sobic002G054300 Sobic002G054300 Sobic010G184100--Sobic002G054300 Sobic010G184100--Sobic001G080700 Sobic001G391600 Sobic001G391600 Sobic010G184100--Sobic001G391600 Sobic007G159500 Sobic007G159500 Sobic010G184100--Sobic007G159500 Sobic002G401100 Sobic002G401100 Sobic010G184100--Sobic002G401100 Sobic001G386300 Sobic001G386300 Sobic010G184100--Sobic001G386300 Sobic001G392300 Sobic001G392300 Sobic001G080700--Sobic001G392300 Sobic001G080700--Sobic009G165800 Sobic001G080700--Sobic010G251000 Sobic001G080700--Sobic004G066200 Sobic001G080700--Sobic003G264200 Sobic001G080700--Sobic009G222500 Sobic001G080700--Sobic006G101700 Sobic001G332500 Sobic001G332500 Sobic001G080700--Sobic001G332500 Sobic001G007000 Sobic001G007000 Sobic001G080700--Sobic001G007000 Sobic007G078500--Sobic001G281600 Sobic007G078600 Sobic007G078600 Sobic007G078500--Sobic007G078600 Sobic007G078500--Sobic004G121100 Sobic007G078500--Sobic009G179700 Sobic008G179700 Sobic008G179700 Sobic007G078500--Sobic008G179700 Sobic008G076800 Sobic008G076800 Sobic007G078500--Sobic008G076800 Sobic007G078500--Sobic001G080700 Sobic010G279700 Sobic010G279700 Sobic007G078500--Sobic010G279700 Sobic001G375700 Sobic001G375700 Sobic007G078500--Sobic001G375700 Sobic001G395400 Sobic001G395400 Sobic007G166100--Sobic001G395400 Sobic010G000900 Sobic010G000900 Sobic007G166100--Sobic010G000900 Sobic004G356900 Sobic004G356900 Sobic007G166100--Sobic004G356900 Sobic002G400000 Sobic002G400000 Sobic007G166100--Sobic002G400000 Sobic004G104900 Sobic004G104900 Sobic007G166100--Sobic004G104900 Sobic009G004600 Sobic009G004600 Sobic007G166100--Sobic009G004600 Sobic001G085100 Sobic001G085100 Sobic007G166100--Sobic001G085100 Sobic007G166100--Sobic010G027600 Sobic007G166100--Sobic004G066200 Sobic004G059000 Sobic004G059000 Sobic003G250500--Sobic004G059000 Sobic004G305600 Sobic004G305600 Sobic003G250500--Sobic004G305600 Sobic004G301900 Sobic004G301900 Sobic003G250500--Sobic004G301900 Sobic008G062000 Sobic008G062000 Sobic003G250500--Sobic008G062000 Sobic003G250500--Sobic001G281600 Sobic003G226500 Sobic003G226500 Sobic003G250500--Sobic003G226500 Sobic004G253000 Sobic004G253000 Sobic003G250500--Sobic004G253000 Sobic001G512600 Sobic001G512600 Sobic003G250500--Sobic001G512600 Sobic001G119300 Sobic001G119300 Sobic003G250500--Sobic001G119300 Sobic006G270900 Sobic006G270900 Sobic002G113900--Sobic006G270900 Sobic002G113900--Sobic009G004600 Sobic004G226800 Sobic004G226800 Sobic002G113900--Sobic004G226800 Sobic002G113900--Sobic006G049700 Sobic002G113900--Sobic004G356900 Sobic002G113900--Sobic004G301900 Sobic007G019800 Sobic007G019800 Sobic002G113900--Sobic007G019800 Sobic002G113900--Sobic004G104900 Sobic002G268400 Sobic002G268400 Sobic002G113900--Sobic002G268400
Octagon: transcription factors


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