Gene annotation
Transcriptome id Sobic.001G459100.1
Synonym Sb01g043090, SNP33, ATSNAP33, SNAP33, ATSNAP33B
Functional annotation SNARE domain containing protein, putative, expressed
UniProt C5WTM4
Pfam -
Panther DB PTHR19305 PTHR19305:SF7
NCBI CDD KOG3065; SNAP-25 (synaptosome-associated protein) component of SNARE complex
KEGG Orthology K18211; synaptosomal-associated protein 25
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G61210 : soluble N-ethylmaleimide-sensitive factor adaptor protein 33
RAP-DB (Rice) LOC_Os03g11380.3 : SNARE domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a001277
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G226800 expressed protein -
2 Sobic.006G049700 SAM domain family protein, expressed -
3 Sobic.001G234200 actin, putative, expressed K16615: actin-related protein 7, plant
4 Sobic.004G232800 expressed protein -
5 Sobic.002G113900 lipid binding protein, putative, expressed -
6 Sobic.004G356900 - K13025: EIF4A3, ATP-dependent RNA helicase
7 Sobic.006G233000 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
8 Sobic.004G077600 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
9 Sobic.001G119900 - K12858: DDX23, ATP-dependent RNA helicase DDX23/PRP28
10 Sobic.003G113800 CGMC_GSK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
K00924: kinase
11 Sobic.002G268400 expressed protein -
12 Sobic.009G155250 - -
13 Sobic.006G179800 HMG1/2, putative, expressed -
14 Sobic.003G122500 RNA binding protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
15 Sobic.001G114500 ATP binding protein, putative, expressed K06883: uncharacterized protein
16 Sobic.001G031100 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00721: dolichol-phosphate mannosyltransferase
17 Sobic.004G001400 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
18 Sobic.001G341500 transcription initiation factor IID, putative, expressed K03133: TAF9B, transcription initiation factor TFIID subunit 9B
19 Sobic.004G301900 potyvirus VPg interacting protein, putative, expressed -
20 Sobic.006G270900 acyl-CoA-binding domain-containing protein 6, putative, expressed -


Gene co-expression network
sample Sobic001G459100 Sobic001G459100 Sobic004G226800 Sobic004G226800 Sobic001G459100--Sobic004G226800 Sobic006G049700 Sobic006G049700 Sobic001G459100--Sobic006G049700 Sobic001G234200 Sobic001G234200 Sobic001G459100--Sobic001G234200 Sobic004G232800 Sobic004G232800 Sobic001G459100--Sobic004G232800 Sobic002G113900 Sobic002G113900 Sobic001G459100--Sobic002G113900 Sobic004G356900 Sobic004G356900 Sobic001G459100--Sobic004G356900 Sobic006G233000 Sobic006G233000 Sobic001G459100--Sobic006G233000 Sobic004G077600 Sobic004G077600 Sobic001G459100--Sobic004G077600 Sobic001G119900 Sobic001G119900 Sobic001G459100--Sobic001G119900 Sobic004G226800--Sobic004G356900 Sobic004G226800--Sobic006G049700 Sobic002G256300 Sobic002G256300 Sobic004G226800--Sobic002G256300 Sobic004G226800--Sobic002G113900 Sobic010G193800 Sobic010G193800 Sobic004G226800--Sobic010G193800 Sobic003G226500 Sobic003G226500 Sobic004G226800--Sobic003G226500 Sobic004G226800--Sobic001G459100 Sobic002G204000 Sobic002G204000 Sobic004G226800--Sobic002G204000 Sobic004G226800--Sobic004G232800 Sobic009G222500 Sobic009G222500 Sobic006G049700--Sobic009G222500 Sobic007G166400 Sobic007G166400 Sobic006G049700--Sobic007G166400 Sobic003G264200 Sobic003G264200 Sobic006G049700--Sobic003G264200 Sobic006G101700 Sobic006G101700 Sobic006G049700--Sobic006G101700 Sobic007G167900 Sobic007G167900 Sobic006G049700--Sobic007G167900 Sobic006G049700--Sobic004G226800 Sobic010G027600 Sobic010G027600 Sobic006G049700--Sobic010G027600 Sobic006G049700--Sobic002G113900 Sobic006G049700--Sobic004G356900 Sobic002G071000 Sobic002G071000 Sobic001G234200--Sobic002G071000 Sobic001G234200--Sobic006G049700 Sobic006G010000 Sobic006G010000 Sobic001G234200--Sobic006G010000 Sobic003G293300 Sobic003G293300 Sobic001G234200--Sobic003G293300 Sobic007G079300 Sobic007G079300 Sobic001G234200--Sobic007G079300 Sobic001G114500 Sobic001G114500 Sobic001G234200--Sobic001G114500 Sobic001G234200--Sobic001G459100 Sobic002G083900 Sobic002G083900 Sobic001G234200--Sobic002G083900 Sobic001G234200--Sobic003G264200 Sobic010G205300 Sobic010G205300 Sobic004G232800--Sobic010G205300 Sobic004G232800--Sobic004G356900 Sobic009G004600 Sobic009G004600 Sobic004G232800--Sobic009G004600 Sobic004G232800--Sobic006G049700 Sobic009G192000 Sobic009G192000 Sobic004G232800--Sobic009G192000 Sobic010G057900 Sobic010G057900 Sobic004G232800--Sobic010G057900 Sobic003G349300 Sobic003G349300 Sobic004G232800--Sobic003G349300 Sobic004G232800--Sobic004G226800 Sobic004G232800--Sobic002G113900 Sobic006G270900 Sobic006G270900 Sobic002G113900--Sobic006G270900 Sobic002G113900--Sobic009G004600 Sobic002G113900--Sobic004G226800 Sobic002G113900--Sobic006G049700 Sobic002G113900--Sobic004G356900 Sobic004G301900 Sobic004G301900 Sobic002G113900--Sobic004G301900 Sobic007G019800 Sobic007G019800 Sobic002G113900--Sobic007G019800 Sobic004G104900 Sobic004G104900 Sobic002G113900--Sobic004G104900 Sobic002G268400 Sobic002G268400 Sobic002G113900--Sobic002G268400 Sobic008G004400 Sobic008G004400 Sobic004G356900--Sobic008G004400 Sobic004G356900--Sobic004G226800 Sobic004G356900--Sobic009G004600 Sobic004G356900--Sobic010G193800 Sobic004G356900--Sobic010G205300 Sobic004G356900--Sobic006G101700 Sobic004G356900--Sobic004G232800 Sobic004G356900--Sobic002G268400 Sobic003G239800 Sobic003G239800 Sobic004G356900--Sobic003G239800 Sobic006G233000--Sobic006G010000 Sobic010G085200 Sobic010G085200 Sobic006G233000--Sobic010G085200 Sobic006G233300 Sobic006G233300 Sobic006G233000--Sobic006G233300 Sobic004G155600 Sobic004G155600 Sobic006G233000--Sobic004G155600 Sobic001G259000 Sobic001G259000 Sobic006G233000--Sobic001G259000 Sobic002G394800 Sobic002G394800 Sobic006G233000--Sobic002G394800 Sobic003G439800 Sobic003G439800 Sobic006G233000--Sobic003G439800 Sobic006G270600 Sobic006G270600 Sobic006G233000--Sobic006G270600 Sobic007G134100 Sobic007G134100 Sobic006G233000--Sobic007G134100 Sobic004G074300 Sobic004G074300 Sobic004G077600--Sobic004G074300 Sobic005G160400 Sobic005G160400 Sobic004G077600--Sobic005G160400 Sobic004G077600--Sobic002G113900 Sobic004G077600--Sobic002G268400 Sobic003G122500 Sobic003G122500 Sobic004G077600--Sobic003G122500 Sobic002G347000 Sobic002G347000 Sobic004G077600--Sobic002G347000 Sobic004G077600--Sobic009G004600 Sobic004G077600--Sobic001G459100 Sobic004G086700 Sobic004G086700 Sobic004G077600--Sobic004G086700 Sobic001G119900--Sobic003G122500 Sobic010G228700 Sobic010G228700 Sobic001G119900--Sobic010G228700 Sobic004G235300 Sobic004G235300 Sobic001G119900--Sobic004G235300 Sobic008G051200 Sobic008G051200 Sobic001G119900--Sobic008G051200 Sobic001G119900--Sobic002G083900 Sobic009G155250 Sobic009G155250 Sobic001G119900--Sobic009G155250 Sobic001G119900--Sobic010G085200 Sobic001G251100 Sobic001G251100 Sobic001G119900--Sobic001G251100 Sobic002G052700 Sobic002G052700 Sobic001G119900--Sobic002G052700
Octagon: transcription factors


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