Gene annotation
Transcriptome id Sobic.006G270900.1
Synonym ACBP, Sb06g033230, ACBP1
Functional annotation acyl-CoA-binding domain-containing protein 6, putative, expressed
UniProt C5YAM1
Pfam PF12796 PF00887
Panther DB PTHR24119 PTHR24119:SF0
NCBI CDD KOG0817; Acyl-CoA-binding protein
KEGG Orthology -
Gene Ontology GO:0000062; fatty-acyl-CoA binding


Orthologs (automatic annotation)
TAIR AT4G27780 : acyl-CoA binding protein 2
RAP-DB (Rice) LOC_Os04g58550.1 : acyl-CoA-binding domain-containing protein 6, putative, expressed
MaizeGDB (Corn) Zm00025a009259 , Zm00025a057401
Brachypodium KQJ85344
Barley HORVU0Hr1G005790.1 , HORVU0Hr1G005790.3 , HORVU0Hr1G005790.2
Wheat TraesCS2D02G600500 , TraesCS2A02G586100 , TraesCS2B02G596900
Populus -


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cDNA sequences
Sobic.006G270900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G268400 expressed protein -
2 Sobic.002G113900 lipid binding protein, putative, expressed -
3 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
4 Sobic.004G356900 - K13025: EIF4A3, ATP-dependent RNA helicase
5 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
6 Sobic.003G405700 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
7 Sobic.010G057900 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5
8 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
9 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
10 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
11 Sobic.007G086500 expressed protein K16584: HAUS augmin-like complex subunit 1
12 Sobic.005G015450 - -
13 Sobic.008G004400 GIL1, putative, expressed -
14 Sobic.001G375700 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
15 Sobic.002G008500 Ser/Thr protein phosphatase family protein, putative, expressed -
16 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
17 Sobic.003G010400 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
18 Sobic.003G314100 AGAP000951-PA, putative, expressed -
19 Sobic.007G187200 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.003G439800 growth inhibition and differentiation-related protein 88, putative, expressed -


Gene co-expression network
sample Sobic006G270900 Sobic006G270900 Sobic002G268400 Sobic002G268400 Sobic006G270900--Sobic002G268400 Sobic002G113900 Sobic002G113900 Sobic006G270900--Sobic002G113900 Sobic001G281600 Sobic001G281600 Sobic006G270900--Sobic001G281600 Sobic004G356900 Sobic004G356900 Sobic006G270900--Sobic004G356900 Sobic010G279700 Sobic010G279700 Sobic006G270900--Sobic010G279700 Sobic003G405700 Sobic003G405700 Sobic006G270900--Sobic003G405700 Sobic010G057900 Sobic010G057900 Sobic006G270900--Sobic010G057900 Sobic009G004600 Sobic009G004600 Sobic006G270900--Sobic009G004600 Sobic001G143500 Sobic001G143500 Sobic006G270900--Sobic001G143500 Sobic002G268400--Sobic010G057900 Sobic001G152000 Sobic001G152000 Sobic002G268400--Sobic001G152000 Sobic004G074300 Sobic004G074300 Sobic002G268400--Sobic004G074300 Sobic006G252100 Sobic006G252100 Sobic002G268400--Sobic006G252100 Sobic009G033900 Sobic009G033900 Sobic002G268400--Sobic009G033900 Sobic002G268400--Sobic006G270900 Sobic006G183000 Sobic006G183000 Sobic002G268400--Sobic006G183000 Sobic002G268400--Sobic004G356900 Sobic003G439800 Sobic003G439800 Sobic002G268400--Sobic003G439800 Sobic002G113900--Sobic006G270900 Sobic002G113900--Sobic009G004600 Sobic004G226800 Sobic004G226800 Sobic002G113900--Sobic004G226800 Sobic006G049700 Sobic006G049700 Sobic002G113900--Sobic006G049700 Sobic002G113900--Sobic004G356900 Sobic004G301900 Sobic004G301900 Sobic002G113900--Sobic004G301900 Sobic007G019800 Sobic007G019800 Sobic002G113900--Sobic007G019800 Sobic004G104900 Sobic004G104900 Sobic002G113900--Sobic004G104900 Sobic002G113900--Sobic002G268400 Sobic001G281600--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic003G401100 Sobic003G401100 Sobic001G281600--Sobic003G401100 Sobic004G121100 Sobic004G121100 Sobic001G281600--Sobic004G121100 Sobic009G215800 Sobic009G215800 Sobic001G281600--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic001G281600--Sobic004G084300 Sobic009G050900 Sobic009G050900 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700 Sobic008G004400 Sobic008G004400 Sobic004G356900--Sobic008G004400 Sobic004G356900--Sobic004G226800 Sobic004G356900--Sobic009G004600 Sobic010G193800 Sobic010G193800 Sobic004G356900--Sobic010G193800 Sobic010G205300 Sobic010G205300 Sobic004G356900--Sobic010G205300 Sobic006G101700 Sobic006G101700 Sobic004G356900--Sobic006G101700 Sobic004G232800 Sobic004G232800 Sobic004G356900--Sobic004G232800 Sobic004G356900--Sobic002G268400 Sobic003G239800 Sobic003G239800 Sobic004G356900--Sobic003G239800 Sobic010G279700--Sobic001G281600 Sobic008G083000 Sobic008G083000 Sobic010G279700--Sobic008G083000 Sobic010G279700--Sobic003G401100 Sobic001G094900 Sobic001G094900 Sobic010G279700--Sobic001G094900 Sobic007G191700 Sobic007G191700 Sobic010G279700--Sobic007G191700 Sobic005G106500 Sobic005G106500 Sobic010G279700--Sobic005G106500 Sobic008G092300 Sobic008G092300 Sobic010G279700--Sobic008G092300 Sobic007G203200 Sobic007G203200 Sobic010G279700--Sobic007G203200 Sobic004G021200 Sobic004G021200 Sobic010G279700--Sobic004G021200 Sobic004G305600 Sobic004G305600 Sobic003G405700--Sobic004G305600 Sobic001G080000 Sobic001G080000 Sobic003G405700--Sobic001G080000 Sobic003G405700--Sobic006G183000 Sobic002G129000 Sobic002G129000 Sobic003G405700--Sobic002G129000 Sobic010G105600 Sobic010G105600 Sobic003G405700--Sobic010G105600 Sobic009G050700 Sobic009G050700 Sobic003G405700--Sobic009G050700 Sobic001G136900 Sobic001G136900 Sobic003G405700--Sobic001G136900 Sobic004G059000 Sobic004G059000 Sobic003G405700--Sobic004G059000 Sobic002G272600 Sobic002G272600 Sobic003G405700--Sobic002G272600 Sobic010G057900--Sobic002G268400 Sobic010G057900--Sobic006G101700 Sobic002G143000 Sobic002G143000 Sobic010G057900--Sobic002G143000 Sobic001G078800 Sobic001G078800 Sobic010G057900--Sobic001G078800 Sobic003G314100 Sobic003G314100 Sobic010G057900--Sobic003G314100 Sobic009G192000 Sobic009G192000 Sobic010G057900--Sobic009G192000 Sobic010G057900--Sobic010G205300 Sobic001G458700 Sobic001G458700 Sobic010G057900--Sobic001G458700 Sobic010G057900--Sobic004G356900 Sobic002G400000 Sobic002G400000 Sobic009G004600--Sobic002G400000 Sobic009G004600--Sobic004G356900 Sobic003G217400 Sobic003G217400 Sobic009G004600--Sobic003G217400 Sobic009G198500 Sobic009G198500 Sobic009G004600--Sobic009G198500 Sobic001G263000 Sobic001G263000 Sobic009G004600--Sobic001G263000 Sobic001G314500 Sobic001G314500 Sobic009G004600--Sobic001G314500 Sobic009G004600--Sobic002G113900 Sobic009G004600--Sobic010G205300 Sobic007G168600 Sobic007G168600 Sobic009G004600--Sobic007G168600 Sobic006G252700 Sobic006G252700 Sobic001G143500--Sobic006G252700 Sobic007G111100 Sobic007G111100 Sobic001G143500--Sobic007G111100 Sobic002G313500 Sobic002G313500 Sobic001G143500--Sobic002G313500 Sobic004G350100 Sobic004G350100 Sobic001G143500--Sobic004G350100 Sobic001G143500--Sobic003G401100 Sobic001G143500--Sobic003G439800 Sobic001G466700 Sobic001G466700 Sobic001G143500--Sobic001G466700 Sobic006G278700 Sobic006G278700 Sobic001G143500--Sobic006G278700 Sobic006G267300 Sobic006G267300 Sobic001G143500--Sobic006G267300
Octagon: transcription factors


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