Gene annotation
Transcriptome id Sobic.005G015450.1
Synonym -
Functional annotation -
UniProt A0A1B6PPN1
Pfam PF13639 PF00067
Panther DB PTHR24282 PTHR24282:SF51
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005515protein binding GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT5G24910 : cytochrome P450, family 714, subfamily A, polypeptide 1
RAP-DB (Rice) LOC_Os12g02640.1 : cytochrome P450 72A1, putative, expressed
MaizeGDB (Corn) Zm00025a033322 , Zm00025a033323
Brachypodium -
Barley HORVU4Hr1G023470.19 , HORVU4Hr1G023470.12 , HORVU4Hr1G023470.13 , HORVU4Hr1G023470.10 , HORVU4Hr1G023470.11 , HORVU4Hr1G023470.16 , HORVU4Hr1G023470.17 , HORVU4Hr1G023470.15 , HORVU5Hr1G046250.23 , HORVU5Hr1G046250.22 , HORVU5Hr1G046250.21 , HORVU5Hr1G046250.20 , HORVU5Hr1G046250.26 , HORVU5Hr1G046250.25 , HORVU5Hr1G046250.24 , HORVU5Hr1G046250.29 , HORVU5Hr1G046250.28 , HORVU5Hr1G046250.19 , HORVU5Hr1G046250.12 , HORVU5Hr1G046250.13 , HORVU5Hr1G046250.10 , HORVU5Hr1G046250.11 , HORVU5Hr1G046250.16 , HORVU5Hr1G046250.15 , HORVU4Hr1G023470.3 , HORVU4Hr1G023470.4 , HORVU4Hr1G023470.5 , HORVU4Hr1G023470.6 , HORVU4Hr1G023470.7 , HORVU4Hr1G023470.8 , HORVU4Hr1G023470.9 , HORVU5Hr1G046220.15 , HORVU5Hr1G046220.14 , HORVU5Hr1G046220.11 , HORVU5Hr1G046220.13 , HORVU4Hr1G023470.23 , HORVU4Hr1G023470.20 , HORVU4Hr1G023470.25 , HORVU5Hr1G046250.1 , HORVU5Hr1G046250.4 , HORVU5Hr1G046220.9 , HORVU5Hr1G046220.8 , HORVU5Hr1G046220.1 , HORVU5Hr1G046220.3 , HORVU5Hr1G046220.5 , HORVU5Hr1G046220.4 , HORVU5Hr1G046220.7
Wheat TraesCS4A02G216000 , TraesCS4D02G096600 , TraesCS4B02G122900 , TraesCS5D02G146600 , TraesCS5D02G146600 , TraesCS4B02G100300 , TraesCS4D02G121000 , TraesCS4D02G121000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G422900 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
2 Sobic.002G268400 expressed protein -
3 Sobic.006G014100 serine-rich 25 kDa antigen protein, putative, expressed -
4 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
5 Sobic.001G094900 protein transport protein Sec23B, putative, expressed K14006: protein transport protein SEC23
6 Sobic.006G270900 acyl-CoA-binding domain-containing protein 6, putative, expressed -
7 Sobic.006G101700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
8 Sobic.003G264200 Ser/Thr protein phosphatase family protein, putative, expressed K15498: serine/threonine-protein phosphatase 6 catalytic subunit
9 Sobic.008G153500 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
10 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
11 Sobic.002G117400 expressed protein -
12 Sobic.006G278700 expressed protein -
13 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
14 Sobic.002G161800 Myb-like DNA-binding domain containing protein, putative, expressed -
15 Sobic.010G029900 leucine carboxyl methyltransferase 1, putative, expressed K15451: PPM2, LCMT2, tRNA wybutosine-synthesizing protein 4
16 Sobic.008G179700 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
17 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
18 Sobic.008G046500 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
19 Sobic.008G004400 GIL1, putative, expressed -
20 Sobic.006G118700 MYB family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic005G015450 Sobic005G015450 Sobic003G422900 Sobic003G422900 Sobic005G015450--Sobic003G422900 Sobic002G268400 Sobic002G268400 Sobic005G015450--Sobic002G268400 Sobic006G014100 Sobic006G014100 Sobic005G015450--Sobic006G014100 Sobic007G191700 Sobic007G191700 Sobic005G015450--Sobic007G191700 Sobic001G094900 Sobic001G094900 Sobic005G015450--Sobic001G094900 Sobic006G270900 Sobic006G270900 Sobic005G015450--Sobic006G270900 Sobic006G101700 Sobic006G101700 Sobic005G015450--Sobic006G101700 Sobic003G264200 Sobic003G264200 Sobic005G015450--Sobic003G264200 Sobic008G153500 Sobic008G153500 Sobic005G015450--Sobic008G153500 Sobic010G020400 Sobic010G020400 Sobic003G422900--Sobic010G020400 Sobic003G155900 Sobic003G155900 Sobic003G422900--Sobic003G155900 Sobic002G303600 Sobic002G303600 Sobic003G422900--Sobic002G303600 Sobic009G164000 Sobic009G164000 Sobic003G422900--Sobic009G164000 Sobic009G044800 Sobic009G044800 Sobic003G422900--Sobic009G044800 Sobic001G392300 Sobic001G392300 Sobic003G422900--Sobic001G392300 Sobic004G257100 Sobic004G257100 Sobic003G422900--Sobic004G257100 Sobic002G256200 Sobic002G256200 Sobic003G422900--Sobic002G256200 Sobic008G082500 Sobic008G082500 Sobic003G422900--Sobic008G082500 Sobic010G057900 Sobic010G057900 Sobic002G268400--Sobic010G057900 Sobic001G152000 Sobic001G152000 Sobic002G268400--Sobic001G152000 Sobic004G074300 Sobic004G074300 Sobic002G268400--Sobic004G074300 Sobic006G252100 Sobic006G252100 Sobic002G268400--Sobic006G252100 Sobic009G033900 Sobic009G033900 Sobic002G268400--Sobic009G033900 Sobic002G268400--Sobic006G270900 Sobic006G183000 Sobic006G183000 Sobic002G268400--Sobic006G183000 Sobic004G356900 Sobic004G356900 Sobic002G268400--Sobic004G356900 Sobic003G439800 Sobic003G439800 Sobic002G268400--Sobic003G439800 Sobic004G155600 Sobic004G155600 Sobic006G014100--Sobic004G155600 Sobic010G237900 Sobic010G237900 Sobic006G014100--Sobic010G237900 Sobic004G266900 Sobic004G266900 Sobic006G014100--Sobic004G266900 Sobic006G014100--Sobic007G191700 Sobic001G395100 Sobic001G395100 Sobic006G014100--Sobic001G395100 Sobic006G270600 Sobic006G270600 Sobic006G014100--Sobic006G270600 Sobic001G002600 Sobic001G002600 Sobic006G014100--Sobic001G002600 Sobic003G379200 Sobic003G379200 Sobic006G014100--Sobic003G379200 Sobic008G047300 Sobic008G047300 Sobic006G014100--Sobic008G047300 Sobic007G191700--Sobic010G237900 Sobic007G091600 Sobic007G091600 Sobic007G191700--Sobic007G091600 Sobic004G129300 Sobic004G129300 Sobic007G191700--Sobic004G129300 Sobic007G191700--Sobic001G395100 Sobic005G079800 Sobic005G079800 Sobic007G191700--Sobic005G079800 Sobic010G279700 Sobic010G279700 Sobic007G191700--Sobic010G279700 Sobic006G118700 Sobic006G118700 Sobic007G191700--Sobic006G118700 Sobic007G041300 Sobic007G041300 Sobic007G191700--Sobic007G041300 Sobic001G473600 Sobic001G473600 Sobic007G191700--Sobic001G473600 Sobic001G094900--Sobic010G279700 Sobic001G094900--Sobic006G118700 Sobic001G281600 Sobic001G281600 Sobic001G094900--Sobic001G281600 Sobic008G092300 Sobic008G092300 Sobic001G094900--Sobic008G092300 Sobic007G183900 Sobic007G183900 Sobic001G094900--Sobic007G183900 Sobic008G179700 Sobic008G179700 Sobic001G094900--Sobic008G179700 Sobic001G124200 Sobic001G124200 Sobic001G094900--Sobic001G124200 Sobic001G261456 Sobic001G261456 Sobic001G094900--Sobic001G261456 Sobic003G401100 Sobic003G401100 Sobic001G094900--Sobic003G401100 Sobic006G270900--Sobic002G268400 Sobic002G113900 Sobic002G113900 Sobic006G270900--Sobic002G113900 Sobic006G270900--Sobic001G281600 Sobic006G270900--Sobic004G356900 Sobic006G270900--Sobic010G279700 Sobic003G405700 Sobic003G405700 Sobic006G270900--Sobic003G405700 Sobic006G270900--Sobic010G057900 Sobic009G004600 Sobic009G004600 Sobic006G270900--Sobic009G004600 Sobic001G143500 Sobic001G143500 Sobic006G270900--Sobic001G143500 Sobic004G066200 Sobic004G066200 Sobic006G101700--Sobic004G066200 Sobic007G166400 Sobic007G166400 Sobic006G101700--Sobic007G166400 Sobic001G085100 Sobic001G085100 Sobic006G101700--Sobic001G085100 Sobic001G080700 Sobic001G080700 Sobic006G101700--Sobic001G080700 Sobic009G222500 Sobic009G222500 Sobic006G101700--Sobic009G222500 Sobic009G165800 Sobic009G165800 Sobic006G101700--Sobic009G165800 Sobic002G192200 Sobic002G192200 Sobic006G101700--Sobic002G192200 Sobic006G049700 Sobic006G049700 Sobic006G101700--Sobic006G049700 Sobic001G512300 Sobic001G512300 Sobic006G101700--Sobic001G512300 Sobic001G031100 Sobic001G031100 Sobic003G264200--Sobic001G031100 Sobic003G264200--Sobic001G080700 Sobic003G264200--Sobic007G166400 Sobic003G264200--Sobic009G222500 Sobic003G264200--Sobic006G049700 Sobic003G264200--Sobic006G101700 Sobic002G047700 Sobic002G047700 Sobic003G264200--Sobic002G047700 Sobic003G264200--Sobic009G165800 Sobic007G166100 Sobic007G166100 Sobic003G264200--Sobic007G166100 Sobic008G153500--Sobic007G166400 Sobic008G153500--Sobic006G049700 Sobic002G361400 Sobic002G361400 Sobic008G153500--Sobic002G361400 Sobic006G010000 Sobic006G010000 Sobic008G153500--Sobic006G010000 Sobic008G153500--Sobic006G101700 Sobic009G095100 Sobic009G095100 Sobic008G153500--Sobic009G095100 Sobic009G179700 Sobic009G179700 Sobic008G153500--Sobic009G179700 Sobic008G153500--Sobic009G222500 Sobic004G115350 Sobic004G115350 Sobic008G153500--Sobic004G115350
Octagon: transcription factors


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