Gene annotation
Transcriptome id Sobic.002G161800.1
Synonym Sb02g020700
Functional annotation Myb-like DNA-binding domain containing protein, putative, expressed
UniProt C5X8Z3
Pfam PF00249 PF14379
Panther DB PTHR31314 PTHR31314:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01060 : myb-like HTH transcriptional regulator family protein
RAP-DB (Rice) LOC_Os09g12770.1 : Myb-like DNA-binding domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a046367
Brachypodium PNT67180 , PNT67181 , PNT67179 , PNT67178 , KQJ89767 , KQJ89768 , KQJ96284
Barley -
Wheat TraesCS5A02G178600
Populus -


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cDNA sequences
Sobic.002G161800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
2 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
3 Sobic.008G179700 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
4 Sobic.010G251000 ubiquitin-conjugating enzyme, putative, expressed K10579: UBE2M, ubiquitin-conjugating enzyme E2 M
5 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
6 Sobic.006G008600 zinc finger family protein, putative, expressed -
7 Sobic.002G054300 ABC transporter, ATP-binding protein, putative, expressed K06184: ATP-binding cassette, subfamily F, member 1
8 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
9 Sobic.001G332500 WRKY81, expressed -
10 Sobic.003G010400 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
11 Sobic.001G007000 -(PubMedID : 26976818)@4-nitrophenylphosphatase, putative, expressed K19269: PGP, phosphoglycolate phosphatase
12 Sobic.007G078600 YT521-B, putative, expressed -
13 Sobic.009G205200 OsFBX170 - F-box domain containing protein, expressed -
14 Sobic.004G121100 expressed protein -
15 Sobic.009G179700 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
16 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
17 Sobic.001G375700 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
18 Sobic.008G046500 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
19 Sobic.006G200600 expressed protein -
20 Sobic.003G264200 Ser/Thr protein phosphatase family protein, putative, expressed K15498: serine/threonine-protein phosphatase 6 catalytic subunit


Gene co-expression network
sample Sobic002G161800 Sobic002G161800 Sobic001G392300 Sobic001G392300 Sobic002G161800--Sobic001G392300 Sobic001G080700 Sobic001G080700 Sobic002G161800--Sobic001G080700 Sobic008G179700 Sobic008G179700 Sobic002G161800--Sobic008G179700 Sobic010G251000 Sobic010G251000 Sobic002G161800--Sobic010G251000 Sobic001G281600 Sobic001G281600 Sobic002G161800--Sobic001G281600 Sobic006G008600 Sobic006G008600 Sobic002G161800--Sobic006G008600 Sobic002G054300 Sobic002G054300 Sobic002G161800--Sobic002G054300 Sobic008G047800 Sobic008G047800 Sobic002G161800--Sobic008G047800 Sobic001G332500 Sobic001G332500 Sobic002G161800--Sobic001G332500 Sobic001G392300--Sobic001G080700 Sobic007G061000 Sobic007G061000 Sobic001G392300--Sobic007G061000 Sobic009G177500 Sobic009G177500 Sobic001G392300--Sobic009G177500 Sobic004G353200 Sobic004G353200 Sobic001G392300--Sobic004G353200 Sobic001G007000 Sobic001G007000 Sobic001G392300--Sobic001G007000 Sobic007G075900 Sobic007G075900 Sobic001G392300--Sobic007G075900 Sobic009G044800 Sobic009G044800 Sobic001G392300--Sobic009G044800 Sobic001G392300--Sobic008G047800 Sobic006G200600 Sobic006G200600 Sobic001G392300--Sobic006G200600 Sobic001G080700--Sobic001G392300 Sobic009G165800 Sobic009G165800 Sobic001G080700--Sobic009G165800 Sobic001G080700--Sobic010G251000 Sobic004G066200 Sobic004G066200 Sobic001G080700--Sobic004G066200 Sobic003G264200 Sobic003G264200 Sobic001G080700--Sobic003G264200 Sobic009G222500 Sobic009G222500 Sobic001G080700--Sobic009G222500 Sobic006G101700 Sobic006G101700 Sobic001G080700--Sobic006G101700 Sobic001G080700--Sobic001G332500 Sobic001G080700--Sobic001G007000 Sobic002G350300 Sobic002G350300 Sobic008G179700--Sobic002G350300 Sobic003G248200 Sobic003G248200 Sobic008G179700--Sobic003G248200 Sobic008G179700--Sobic001G281600 Sobic001G356600 Sobic001G356600 Sobic008G179700--Sobic001G356600 Sobic009G179700 Sobic009G179700 Sobic008G179700--Sobic009G179700 Sobic004G084300 Sobic004G084300 Sobic008G179700--Sobic004G084300 Sobic003G401100 Sobic003G401100 Sobic008G179700--Sobic003G401100 Sobic002G126500 Sobic002G126500 Sobic008G179700--Sobic002G126500 Sobic001G512700 Sobic001G512700 Sobic008G179700--Sobic001G512700 Sobic010G251000--Sobic001G007000 Sobic010G251000--Sobic001G080700 Sobic010G251000--Sobic006G200600 Sobic010G251000--Sobic004G066200 Sobic004G121100 Sobic004G121100 Sobic010G251000--Sobic004G121100 Sobic010G251000--Sobic001G392300 Sobic001G047400 Sobic001G047400 Sobic010G251000--Sobic001G047400 Sobic010G251000--Sobic004G353200 Sobic008G046500 Sobic008G046500 Sobic010G251000--Sobic008G046500 Sobic010G279700 Sobic010G279700 Sobic001G281600--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic001G281600--Sobic007G078500 Sobic001G281600--Sobic006G200600 Sobic001G281600--Sobic003G401100 Sobic001G281600--Sobic004G121100 Sobic009G215800 Sobic009G215800 Sobic001G281600--Sobic009G215800 Sobic001G281600--Sobic004G084300 Sobic009G050900 Sobic009G050900 Sobic001G281600--Sobic009G050900 Sobic001G281600--Sobic008G179700 Sobic007G218000 Sobic007G218000 Sobic006G008600--Sobic007G218000 Sobic006G008600--Sobic001G392300 Sobic006G012500 Sobic006G012500 Sobic006G008600--Sobic006G012500 Sobic006G163800 Sobic006G163800 Sobic006G008600--Sobic006G163800 Sobic002G297200 Sobic002G297200 Sobic006G008600--Sobic002G297200 Sobic006G008600--Sobic004G084300 Sobic002G264200 Sobic002G264200 Sobic006G008600--Sobic002G264200 Sobic004G146500 Sobic004G146500 Sobic006G008600--Sobic004G146500 Sobic006G008600--Sobic008G047800 Sobic002G054300--Sobic001G080700 Sobic001G386300 Sobic001G386300 Sobic002G054300--Sobic001G386300 Sobic001G375700 Sobic001G375700 Sobic002G054300--Sobic001G375700 Sobic002G054300--Sobic001G332500 Sobic002G054300--Sobic001G392300 Sobic009G205200 Sobic009G205200 Sobic002G054300--Sobic009G205200 Sobic002G054300--Sobic002G161800 Sobic002G054300--Sobic008G179700 Sobic002G054300--Sobic010G251000 Sobic002G006900 Sobic002G006900 Sobic008G047800--Sobic002G006900 Sobic008G047800--Sobic004G084300 Sobic008G047800--Sobic001G512700 Sobic001G155000 Sobic001G155000 Sobic008G047800--Sobic001G155000 Sobic009G040600 Sobic009G040600 Sobic008G047800--Sobic009G040600 Sobic007G011300 Sobic007G011300 Sobic008G047800--Sobic007G011300 Sobic007G217000 Sobic007G217000 Sobic008G047800--Sobic007G217000 Sobic004G274200 Sobic004G274200 Sobic008G047800--Sobic004G274200 Sobic002G309600 Sobic002G309600 Sobic008G047800--Sobic002G309600 Sobic001G332500--Sobic001G080700 Sobic001G122832 Sobic001G122832 Sobic001G332500--Sobic001G122832 Sobic003G253600 Sobic003G253600 Sobic001G332500--Sobic003G253600 Sobic001G332500--Sobic001G375700 Sobic001G332500--Sobic001G392300 Sobic003G221900 Sobic003G221900 Sobic001G332500--Sobic003G221900 Sobic007G136800 Sobic007G136800 Sobic001G332500--Sobic007G136800 Sobic003G398700 Sobic003G398700 Sobic001G332500--Sobic003G398700 Sobic006G185100 Sobic006G185100 Sobic001G332500--Sobic006G185100
Octagon: transcription factors


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